RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 SCARA3Q6AZY7 606 aa16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 SPOPLQ6IQ16 392 aa16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 CNGA4Q8IV77 575 aa16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 PPM1KQ8N3J5 372 aa16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 ZNF397Q8NF99 534 aaPredicted RBP16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 EDEM3Q9BZQ6 932 aa16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 GOLGA2P5Q9HBQ8 144 aa16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 APOBEC3GQ9HC16 384 aaKnown RBP16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 DNAJC12Q9UKB3 198 aa16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 AJAP1Q9UKB5 411 aaPredicted RBP16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 CAPN11Q9UMQ6 739 aa16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 LUC7L2Q9Y383 392 aaKnown RBP16.59■□□□□ 0.25
HERPUD1-219ENST00000570273 BAIAP3O94812 1187 aa16.58■□□□□ 0.24
HERPUD1-219ENST00000570273 ATICP31939 592 aa16.58■□□□□ 0.24
HERPUD1-219ENST00000570273 KRT9P35527 623 aa16.58■□□□□ 0.24
HERPUD1-219ENST00000570273 ADKP55263 362 aaKnown RBP16.58■□□□□ 0.24
HERPUD1-219ENST00000570273 ZBED6P86452 979 aa16.58■□□□□ 0.24
HERPUD1-219ENST00000570273 SGSM1Q2NKQ1 1148 aa16.58■□□□□ 0.24
HERPUD1-219ENST00000570273 C9orf57Q5W0N0 161 aa16.58■□□□□ 0.24
HERPUD1-219ENST00000570273 PHLDB3Q6NSJ2 640 aa16.58■□□□□ 0.24
HERPUD1-219ENST00000570273 RRAGAQ7L523 313 aa16.58■□□□□ 0.24
HERPUD1-219ENST00000570273 CXorf38Q8TB03 319 aa16.58■□□□□ 0.24
HERPUD1-219ENST00000570273 TAF4BQ92750 862 aa16.58■□□□□ 0.24
HERPUD1-219ENST00000570273 ZNF560Q96MR9 790 aa16.58■□□□□ 0.24
HERPUD1-219ENST00000570273 SPAG5Q96R06 1193 aa16.58■□□□□ 0.24
HERPUD1-219ENST00000570273 XYLT2Q9H1B5 865 aa16.58■□□□□ 0.24
HERPUD1-219ENST00000570273 UBE2TQ9NPD8 197 aaPredicted RBP16.58■□□□□ 0.24
HERPUD1-219ENST00000570273 FBXL5Q9UKA1 691 aa16.58■□□□□ 0.24
HERPUD1-219ENST00000570273 MICAL3Q7RTP6 2002 aa16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 PDCD11Q14690 1871 aaKnown RBP16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 LTBP2Q14767 1821 aa16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 ZBBXA8MT70 800 aa16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 RNF225M0QZC1 329 aaPredicted RBP16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 PPEF2O14830 753 aa16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 UPP2O95045 317 aa16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 KCNJ6P48051 423 aa16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 GATMP50440 423 aa16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 WDR5P61964 334 aaKnown RBP16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 MYO1EQ12965 1108 aa16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 NAB2Q15742 525 aa16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 PDXDC1Q6P996 788 aa16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 PSRC1Q6PGN9 363 aaPredicted RBP16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 OTOP2Q7RTS6 562 aa16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 LRRC52Q8N7C0 313 aa16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 BAP1Q92560 729 aa16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 TATDN2Q93075 761 aa16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 HPDLQ96IR7 371 aa16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 LBHD1Q9BQE6 289 aaPredicted RBP16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 NIF3L1Q9GZT8 377 aa16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 NUB1Q9Y5A7 615 aa16.57■□□□□ 0.24
HERPUD1-219ENST00000570273 ANO9A1A5B4 782 aa16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 CASTOR2A6NHX0 329 aa16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 FGBP02675 491 aa16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 TBXAS1P24557 533 aaPredicted RBP16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 LRPAP1P30533 357 aa16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 MFAP3P55082 362 aa16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 DEFB103AP81534 67 aa16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 GCNT1Q02742 428 aa16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 RNASELQ05823 741 aaKnown RBP16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 TUSC3Q13454 348 aa16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 ARID5BQ14865 1188 aa16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 ARHGAP44Q17R89 818 aa16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 ZNF667Q5HYK9 610 aa16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 SCARA5Q6ZMJ2 495 aa16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 ZNF365Q70YC5 407 aa16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 TC2NQ8N9U0 490 aa16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 KAT5Q92993 513 aa16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 FAM81BQ96LP2 452 aa16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 NAA15Q9BXJ9 866 aaKnown RBP16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 MRPL9Q9BYD2 267 aaKnown RBP16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 TBC1D13Q9NVG8 400 aa16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 KANSL3Q9P2N6 904 aa16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 NXF1Q9UBU9 619 aaKnown RBP16.56■□□□□ 0.24
HERPUD1-219ENST00000570273 LRRC53A6NM62 1247 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 TBKBP1A7MCY6 615 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 PODXLO00592 558 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 STAU1O95793 577 aaKnown RBP16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 P4HA1P13674 534 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 PNPLA4P41247 253 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 EPHB4P54760 987 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 CUL2Q13617 745 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 DRAP1Q14919 205 aaPredicted RBP16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 TSR1Q2NL82 804 aaKnown RBP16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 C16orf59Q7L2K0 433 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 ENOSF1Q7L5Y1 443 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 GPIHBP1Q8IV16 184 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 CRIPAKQ8N1N5 446 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 RSPH1Q8WYR4 309 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 KREMEN1Q96MU8 473 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 UROC1Q96N76 676 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 CASD1Q96PB1 797 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 FAM193BQ96PV7 902 aaPredicted RBP16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 STK33Q9BYT3 514 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 VRTNQ9H8Y1 702 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 ABHD10Q9NUJ1 306 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 CACNG4Q9UBN1 327 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 POLIQ9UNA4 740 aa16.55■□□□□ 0.24
HERPUD1-219ENST00000570273 F8VZ95 297 aa16.54■□□□□ 0.24
HERPUD1-219ENST00000570273 PIRO00625 290 aa16.54■□□□□ 0.24
HERPUD1-219ENST00000570273 RPL9P32969 192 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms