RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 SLFN14P0C7P3 912 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 GARTP22102 1010 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 CMA1P23946 247 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 AFMP43652 599 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 AARSP49588 968 aaKnown RBP eCLIP14.15□□□□□ -0.14
CNOT1-220ENST00000569916 WNT7BP56706 349 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 POU5F1Q01860 360 aaKnown RBP14.15□□□□□ -0.14
CNOT1-220ENST00000569916 CUL4BQ13620 913 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 RAB33AQ14088 237 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 VARS2Q5ST30 1063 aaKnown RBP14.15□□□□□ -0.14
CNOT1-220ENST00000569916 ANKS3Q6ZW76 656 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 STXBP4Q6ZWJ1 553 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 EPM2AIP1Q7L775 607 aaPredicted RBP14.15□□□□□ -0.14
CNOT1-220ENST00000569916 GRAMD1CQ8IYS0 662 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 CEP57L1Q8IYX8 460 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 SYCP3Q8IZU3 236 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 ZSWIM2Q8NEG5 633 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 ZNF707Q96C28 371 aaPredicted RBP14.15□□□□□ -0.14
CNOT1-220ENST00000569916 SAAL1Q96ER3 474 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 CBWD1Q9BRT8 395 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 C1QTNF1Q9BXJ1 281 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 RHOBTB2Q9BYZ6 727 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 SCAND2PQ9GZW5 306 aaPredicted RBP14.15□□□□□ -0.14
CNOT1-220ENST00000569916 TMEM206Q9H813 350 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 C11orf16Q9NQ32 467 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 ZDHHC7Q9NXF8 308 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 MUTYHQ9UIF7 546 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 DERAQ9Y315 318 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 CDY1Q9Y6F8 540 aa14.15□□□□□ -0.14
CNOT1-220ENST00000569916 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.14□□□□□ -0.15
CNOT1-220ENST00000569916 FAM237AA0A1B0GTK4 181 aa14.14□□□□□ -0.15
CNOT1-220ENST00000569916 CCDC195A0A1B0GUA6 201 aa14.14□□□□□ -0.15
CNOT1-220ENST00000569916 C2CD4DB7Z1M9 353 aa14.14□□□□□ -0.15
CNOT1-220ENST00000569916 TBC1D4O60343 1298 aa14.14□□□□□ -0.15
CNOT1-220ENST00000569916 ZMYND10O75800 440 aa14.14□□□□□ -0.15
CNOT1-220ENST00000569916 ALADP13716 330 aa14.14□□□□□ -0.15
CNOT1-220ENST00000569916 OR1D2P34982 312 aa14.14□□□□□ -0.15
CNOT1-220ENST00000569916 HOXD13P35453 343 aa14.14□□□□□ -0.15
CNOT1-220ENST00000569916 MRPL58Q14197 206 aaKnown RBP14.14□□□□□ -0.15
CNOT1-220ENST00000569916 TMEM132DQ14C87 1099 aa14.14□□□□□ -0.15
CNOT1-220ENST00000569916 SLC8B1Q6J4K2 584 aa14.14□□□□□ -0.15
CNOT1-220ENST00000569916 CYP26C1Q6V0L0 522 aa14.14□□□□□ -0.15
CNOT1-220ENST00000569916 EFCAB13Q8IY85 973 aa14.14□□□□□ -0.15
CNOT1-220ENST00000569916 BEST2Q8NFU1 509 aa14.14□□□□□ -0.15
CNOT1-220ENST00000569916 FAM213AQ9BRX8 229 aa14.14□□□□□ -0.15
CNOT1-220ENST00000569916 TSHZ2Q9NRE2 1034 aa14.14□□□□□ -0.15
CNOT1-220ENST00000569916 PCDHB8Q9UN66 801 aa14.14□□□□□ -0.15
CNOT1-220ENST00000569916 C2CD2Q9Y426 696 aa14.14□□□□□ -0.15
CNOT1-220ENST00000569916 NR2E1Q9Y466 385 aa14.14□□□□□ -0.15
CNOT1-220ENST00000569916 PVALEFA0A1B0GWK0 134 aa14.13□□□□□ -0.15
CNOT1-220ENST00000569916 M0QZQ0 153 aa14.13□□□□□ -0.15
CNOT1-220ENST00000569916 KLRC4O43908 158 aa14.13□□□□□ -0.15
CNOT1-220ENST00000569916 IL18RAPO95256 599 aa14.13□□□□□ -0.15
CNOT1-220ENST00000569916 LDHAP00338 332 aaKnown RBP14.13□□□□□ -0.15
CNOT1-220ENST00000569916 LIN9Q5TKA1 542 aa14.13□□□□□ -0.15
CNOT1-220ENST00000569916 C9orf57Q5W0N0 161 aa14.13□□□□□ -0.15
CNOT1-220ENST00000569916 ARMCX5Q6P1M9 558 aa14.13□□□□□ -0.15
CNOT1-220ENST00000569916 CCDC149Q6ZUS6 474 aa14.13□□□□□ -0.15
CNOT1-220ENST00000569916 BRSK2Q8IWQ3 736 aa14.13□□□□□ -0.15
CNOT1-220ENST00000569916 ZNF507Q8TCN5 953 aa14.13□□□□□ -0.15
CNOT1-220ENST00000569916 SMG7Q92540 1137 aaKnown RBP14.13□□□□□ -0.15
CNOT1-220ENST00000569916 PAGE5Q96GU1 130 aa14.13□□□□□ -0.15
CNOT1-220ENST00000569916 PCIF1Q9H4Z3 704 aa14.13□□□□□ -0.15
CNOT1-220ENST00000569916 GDPD2Q9HCC8 539 aa14.13□□□□□ -0.15
CNOT1-220ENST00000569916 USP25Q9UHP3 1055 aa14.13□□□□□ -0.15
CNOT1-220ENST00000569916 FBXL5Q9UKA1 691 aa14.13□□□□□ -0.15
CNOT1-220ENST00000569916 USTQ9Y2C2 406 aa14.13□□□□□ -0.15
CNOT1-220ENST00000569916 DOCK8Q8NF50 2099 aa14.13□□□□□ -0.15
CNOT1-220ENST00000569916 UBE4BO95155 1302 aa14.13□□□□□ -0.15
CNOT1-220ENST00000569916 DOCK6Q96HP0 2047 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 A0A1W2PQ27 194 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 A0A1W2PQ64 194 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 A0A1W2PQD8 194 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 ANO9A1A5B4 782 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 WDR27A2RRH5 827 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 GOLGA8IPA6NC78 632 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 FAM86C2PA6NEL3 165 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 GOLGA8JA6NMD2 632 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 H7C4K7 107 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 PIRO00625 290 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 TGFB1I1O43294 461 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 EXTL3O43909 919 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 C8AP07357 584 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 HOXA9P31269 272 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 NDUFA8P51970 172 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 NUCB2P80303 420 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 ROR1Q01973 937 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 GPD1LQ8N335 351 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 TDRD5Q8NAT2 981 aaKnown RBP14.12□□□□□ -0.15
CNOT1-220ENST00000569916 APPL2Q8NEU8 664 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 SCFD1Q8WVM8 642 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 PRKD2Q9BZL6 878 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 GOLPH3LQ9H4A5 285 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 WDR6Q9NNW5 1121 aaKnown RBP14.12□□□□□ -0.15
CNOT1-220ENST00000569916 RBAKQ9NYW8 714 aaPredicted RBP14.12□□□□□ -0.15
CNOT1-220ENST00000569916 CLUHO75153 1309 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 NOTCH4Q99466 2003 aa14.12□□□□□ -0.15
CNOT1-220ENST00000569916 KIAA0391O15091 583 aaKnown RBP14.11□□□□□ -0.15
CNOT1-220ENST00000569916 SPTLC1O15269 473 aa14.11□□□□□ -0.15
CNOT1-220ENST00000569916 GPR37L1O60883 481 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms