RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 CCDC34Q96HJ3 373 aa14.99□□□□□ -0.01
HERPUD1-218ENST00000569569 CLSTN3Q9BQT9 956 aa14.99□□□□□ -0.01
HERPUD1-218ENST00000569569 CBWD1Q9BRT8 395 aa14.99□□□□□ -0.01
HERPUD1-218ENST00000569569 FAM213AQ9BRX8 229 aa14.99□□□□□ -0.01
HERPUD1-218ENST00000569569 PCIF1Q9H4Z3 704 aa14.99□□□□□ -0.01
HERPUD1-218ENST00000569569 EXOC1Q9NV70 894 aa14.99□□□□□ -0.01
HERPUD1-218ENST00000569569 SPDYE4A6NLX3 237 aa14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 I3L4J1 428 aa14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 NFICP08651 508 aa14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 TKTP29401 623 aaKnown RBP14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 MCM4P33991 863 aa14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 ANP32AP39687 249 aaKnown RBP14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 CBX2Q14781 532 aaPredicted RBP14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 BMT2Q1RMZ1 405 aa14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 RARS2Q5T160 578 aaKnown RBP14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 KANK3Q6NY19 840 aa14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 LILRA6Q6PI73 481 aa14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 ANKS3Q6ZW76 656 aa14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 BRSK2Q8IWQ3 736 aa14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 GJD3Q8N144 294 aa14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 C12orf76Q8N812 135 aaPredicted RBP14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 ZSWIM2Q8NEG5 633 aa14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 CCDC47Q96A33 483 aaKnown RBP14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 SUSD3Q96L08 255 aa14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 POP1Q99575 1024 aaKnown RBP14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 PLEKHA4Q9H4M7 779 aa14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 SFXN1Q9H9B4 322 aa14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 MAN1C1Q9NR34 630 aa14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 MTRRQ9UBK8 725 aa14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 MUC3AQ02505 3323 aa14.98□□□□□ -0.01
HERPUD1-218ENST00000569569 GOLGA8IPA6NC78 632 aa14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 C19orf67A6NJJ6 358 aa14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 GOLGA8JA6NMD2 632 aa14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 TGFB1I1O43294 461 aa14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 TGM5O43548 720 aa14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 RPN1P04843 607 aaKnown RBP14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 PAX3P23760 479 aa14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 MTHFRP42898 656 aa14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 GUCY2FP51841 1108 aa14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 ZP2Q05996 745 aa14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 STK4Q13043 487 aa14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 KNOP1Q1ED39 458 aaKnown RBP14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 ATAT1Q5SQI0 421 aa14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 C9orf57Q5W0N0 161 aa14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 NELFCDQ8IXH7 590 aa14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 TMEM130Q8N3G9 435 aa14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 NOC3LQ8WTT2 800 aaKnown RBP14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 RIPOR3Q96MK2 946 aa14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 NECTIN4Q96NY8 510 aa14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 PHF7Q9BWX1 381 aaPredicted RBP14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 KIAA1586Q9HCI6 787 aa14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 RBAKQ9NYW8 714 aaPredicted RBP14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 HSPBP1Q9NZL4 362 aa14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 CGNQ9P2M7 1197 aaKnown RBP14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 BACE2Q9Y5Z0 518 aa14.97□□□□□ -0.01
HERPUD1-218ENST00000569569 ZNF233A6NK53 670 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 H7C4K7 107 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 M0QZQ0 153 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 PIRO00625 290 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 PRR29P0C7W0 189 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 SPATA31D3P0C874 917 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 SSTR3P32745 418 aaPredicted RBP14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 OR1D2P34982 312 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 DPYDQ12882 1025 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 RAB33AQ14088 237 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 MRPL58Q14197 206 aaKnown RBP14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 VARS2Q5ST30 1063 aaKnown RBP14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 TMC5Q6UXY8 1006 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 SPATA31D4Q6ZUB0 917 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 HS2ST1Q7LGA3 356 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 DENND4AQ7Z401 1863 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 EFCAB13Q8IY85 973 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 FMR1NBQ8N0W7 255 aaPredicted RBP14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 KREMEN2Q8NCW0 462 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 APPL2Q8NEU8 664 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 CMASQ8NFW8 434 aaPredicted RBP14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 CACTINQ8WUQ7 758 aaKnown RBP14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 CD320Q9NPF0 282 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 AGPAT3Q9NRZ7 376 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 DPP3Q9NY33 737 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 CHMP5Q9NZZ3 219 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 PCDHB8Q9UN66 801 aa14.96□□□□□ -0.01
HERPUD1-218ENST00000569569 ANO9A1A5B4 782 aa14.95□□□□□ -0.02
HERPUD1-218ENST00000569569 TULP1O00294 542 aaPredicted RBP14.95□□□□□ -0.02
HERPUD1-218ENST00000569569 CLIC2O15247 247 aa14.95□□□□□ -0.02
HERPUD1-218ENST00000569569 ADAM12O43184 909 aa14.95□□□□□ -0.02
HERPUD1-218ENST00000569569 RHOBTB3O94955 611 aa14.95□□□□□ -0.02
HERPUD1-218ENST00000569569 AARSP49588 968 aaKnown RBP eCLIP14.95□□□□□ -0.02
HERPUD1-218ENST00000569569 LILRA4P59901 499 aa14.95□□□□□ -0.02
HERPUD1-218ENST00000569569 SNW1Q13573 536 aaKnown RBP14.95□□□□□ -0.02
HERPUD1-218ENST00000569569 SURF1Q15526 300 aa14.95□□□□□ -0.02
HERPUD1-218ENST00000569569 CYP26C1Q6V0L0 522 aa14.95□□□□□ -0.02
HERPUD1-218ENST00000569569 DSTYKQ6XUX3 929 aa14.95□□□□□ -0.02
HERPUD1-218ENST00000569569 C15orf39Q6ZRI6 1047 aa14.95□□□□□ -0.02
HERPUD1-218ENST00000569569 GPR149Q86SP6 731 aa14.95□□□□□ -0.02
HERPUD1-218ENST00000569569 C12orf56Q8IXR9 622 aa14.95□□□□□ -0.02
HERPUD1-218ENST00000569569 KIAA0895Q8NCT3 520 aa14.95□□□□□ -0.02
HERPUD1-218ENST00000569569 ENGASEQ8NFI3 743 aa14.95□□□□□ -0.02
HERPUD1-218ENST00000569569 CDY1Q9Y6F8 540 aa14.95□□□□□ -0.02
HERPUD1-218ENST00000569569 CCDC195A0A1B0GUA6 201 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms