RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 PTGESO14684 152 aa17.31■□□□□ 0.36
USB1-215ENST00000569252 ZC3H11AO75152 810 aaKnown RBP eCLIP17.31■□□□□ 0.36
USB1-215ENST00000569252 LAG3P18627 525 aa17.31■□□□□ 0.36
USB1-215ENST00000569252 EEF1GP26641 437 aaKnown RBP17.31■□□□□ 0.36
USB1-215ENST00000569252 AFF1P51825 1210 aaKnown RBP17.31■□□□□ 0.36
USB1-215ENST00000569252 BIRC3Q13489 604 aa17.31■□□□□ 0.36
USB1-215ENST00000569252 TRPC3Q13507 836 aa17.31■□□□□ 0.36
USB1-215ENST00000569252 KCNJ12Q14500 433 aa17.31■□□□□ 0.36
USB1-215ENST00000569252 CCDC150Q8NCX0 1101 aa17.31■□□□□ 0.36
USB1-215ENST00000569252 GSTCDQ8NEC7 633 aa17.31■□□□□ 0.36
USB1-215ENST00000569252 ZMAT2Q96NC0 199 aaKnown RBP17.31■□□□□ 0.36
USB1-215ENST00000569252 PPP1R10Q96QC0 940 aaKnown RBP17.31■□□□□ 0.36
USB1-215ENST00000569252 POP1Q99575 1024 aaKnown RBP17.31■□□□□ 0.36
USB1-215ENST00000569252 TMEM175Q9BSA9 504 aa17.31■□□□□ 0.36
USB1-215ENST00000569252 CBX8Q9HC52 389 aa17.31■□□□□ 0.36
USB1-215ENST00000569252 INTS13Q9NVM9 706 aa17.31■□□□□ 0.36
USB1-215ENST00000569252 LMCD1Q9NZU5 365 aa17.31■□□□□ 0.36
USB1-215ENST00000569252 GRXCR2A6NFK2 248 aa17.3■□□□□ 0.36
USB1-215ENST00000569252 TADA2AO75478 443 aa17.3■□□□□ 0.36
USB1-215ENST00000569252 NFICP08651 508 aa17.3■□□□□ 0.36
USB1-215ENST00000569252 KRT19P08727 400 aa17.3■□□□□ 0.36
USB1-215ENST00000569252 PRKCSHP14314 528 aaPredicted RBP17.3■□□□□ 0.36
USB1-215ENST00000569252 GTF2H1P32780 548 aa17.3■□□□□ 0.36
USB1-215ENST00000569252 RBP5P82980 135 aa17.3■□□□□ 0.36
USB1-215ENST00000569252 HSP90AA4PQ58FG1 418 aa17.3■□□□□ 0.36
USB1-215ENST00000569252 ZNF280BQ86YH2 543 aa17.3■□□□□ 0.36
USB1-215ENST00000569252 C18orf25Q96B23 403 aaPredicted RBP17.3■□□□□ 0.36
USB1-215ENST00000569252 ZNF558Q96NG5 402 aa17.3■□□□□ 0.36
USB1-215ENST00000569252 MED15Q96RN5 788 aa17.3■□□□□ 0.36
USB1-215ENST00000569252 NRDE2Q9H7Z3 1164 aa17.3■□□□□ 0.36
USB1-215ENST00000569252 MMRN2Q9H8L6 949 aa17.3■□□□□ 0.36
USB1-215ENST00000569252 SAMSN1Q9NSI8 373 aaKnown RBP17.3■□□□□ 0.36
USB1-215ENST00000569252 CASTOR2A6NHX0 329 aa17.29■□□□□ 0.36
USB1-215ENST00000569252 LRRIQ3A6PVS8 624 aaPredicted RBP17.29■□□□□ 0.36
USB1-215ENST00000569252 N4BP1O75113 896 aaKnown RBP17.29■□□□□ 0.36
USB1-215ENST00000569252 DDHD2O94830 711 aa17.29■□□□□ 0.36
USB1-215ENST00000569252 GTF2F1P35269 517 aaKnown RBP eCLIP17.29■□□□□ 0.36
USB1-215ENST00000569252 MARSP56192 900 aaKnown RBP17.29■□□□□ 0.36
USB1-215ENST00000569252 BCAR1P56945 870 aa17.29■□□□□ 0.36
USB1-215ENST00000569252 KRT17Q04695 432 aa17.29■□□□□ 0.36
USB1-215ENST00000569252 DLX2Q07687 328 aaPredicted RBP17.29■□□□□ 0.36
USB1-215ENST00000569252 GPM6BQ13491 265 aa17.29■□□□□ 0.36
USB1-215ENST00000569252 ZBTB6Q15916 424 aa17.29■□□□□ 0.36
USB1-215ENST00000569252 TCP11X2Q5H9J9 407 aa17.29■□□□□ 0.36
USB1-215ENST00000569252 LMBRD2Q68DH5 695 aaPredicted RBP17.29■□□□□ 0.36
USB1-215ENST00000569252 DCLRE1AQ6PJP8 1040 aa17.29■□□□□ 0.36
USB1-215ENST00000569252 DHX40Q8IX18 779 aaKnown RBP17.29■□□□□ 0.36
USB1-215ENST00000569252 COLGALT2Q8IYK4 626 aa17.29■□□□□ 0.36
USB1-215ENST00000569252 SP7Q8TDD2 431 aaPredicted RBP17.29■□□□□ 0.36
USB1-215ENST00000569252 MRPL38Q96DV4 380 aaKnown RBP17.29■□□□□ 0.36
USB1-215ENST00000569252 SAMD11Q96NU1 681 aa17.29■□□□□ 0.36
USB1-215ENST00000569252 MTMR12Q9C0I1 747 aa17.29■□□□□ 0.36
USB1-215ENST00000569252 ITGA11Q9UKX5 1188 aa17.29■□□□□ 0.36
USB1-215ENST00000569252 MRPL42Q9Y6G3 142 aaKnown RBP17.29■□□□□ 0.36
USB1-215ENST00000569252 TRAPPC3O43617 180 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 B3GAT3O94766 335 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 AFPP02771 609 aaKnown RBP17.28■□□□□ 0.36
USB1-215ENST00000569252 TRIM49P0CI25 452 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 TRIM49CP0CI26 452 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 PAX3P23760 479 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 DLG4P78352 724 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 CLDN10P78369 228 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 MYO1EQ12965 1108 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 FILIP1LQ4L180 1135 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 KRT39Q6A163 491 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 KCNT2Q6UVM3 1135 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 TRAPPC11Q7Z392 1133 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 LUZP1Q86V48 1076 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 EFCAB13Q8IY85 973 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 BORCS6Q96GS4 357 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 TUBGCP2Q9BSJ2 902 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 IMPG2Q9BZV3 1241 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 CXCL16Q9H2A7 254 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 CWH43Q9H720 699 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 RC3H2Q9HBD1 1191 aaKnown RBP17.28■□□□□ 0.36
USB1-215ENST00000569252 TMEM8AQ9HCN3 771 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 SPG21Q9NZD8 308 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 STK39Q9UEW8 545 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 TUBGCP4Q9UGJ1 667 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 PUF60Q9UHX1 559 aaKnown RBP17.28■□□□□ 0.36
USB1-215ENST00000569252 PLAGL2Q9UPG8 496 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 AGAP1Q9UPQ3 857 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 NUB1Q9Y5A7 615 aa17.28■□□□□ 0.36
USB1-215ENST00000569252 PODXLO00592 558 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 NRP1O14786 923 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 MEFVO15553 781 aaPredicted RBP17.27■□□□□ 0.36
USB1-215ENST00000569252 SERPINC1P01008 464 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 ITGB3P05106 788 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 GALTP07902 379 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 LRPAP1P30533 357 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 PPM1AP35813 382 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 PNPLA4P41247 253 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 GCLMP48507 274 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 CLCNKBP51801 687 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 DSC1Q08554 894 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 KCNH2Q12809 1159 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 BMS1Q14692 1282 aaKnown RBP17.27■□□□□ 0.36
USB1-215ENST00000569252 IQCB1Q15051 598 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 MAN2A1Q16706 1144 aa17.27■□□□□ 0.36
USB1-215ENST00000569252 TRIM59Q8IWR1 403 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms