RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 PLEKHA4Q9H4M7 779 aa15.72■□□□□ 0.11
COMMD4-225ENST00000569245 TUBGCP4Q9UGJ1 667 aa15.72■□□□□ 0.11
COMMD4-225ENST00000569245 AGO2Q9UKV8 859 aaKnown RBP15.72■□□□□ 0.11
COMMD4-225ENST00000569245 PCDHA5Q9Y5H7 936 aa15.72■□□□□ 0.11
COMMD4-225ENST00000569245 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.71■□□□□ 0.11
COMMD4-225ENST00000569245 FAM86C2PA6NEL3 165 aa15.71■□□□□ 0.11
COMMD4-225ENST00000569245 XPOTO43592 962 aaKnown RBP15.71■□□□□ 0.11
COMMD4-225ENST00000569245 TKTP29401 623 aaKnown RBP15.71■□□□□ 0.11
COMMD4-225ENST00000569245 ASIC1P78348 528 aa15.71■□□□□ 0.11
COMMD4-225ENST00000569245 KCNA1Q09470 495 aa15.71■□□□□ 0.11
COMMD4-225ENST00000569245 ALCAMQ13740 583 aa15.71■□□□□ 0.11
COMMD4-225ENST00000569245 TMEM31Q5JXX7 168 aa15.71■□□□□ 0.11
COMMD4-225ENST00000569245 L1TD1Q5T7N2 865 aaKnown RBP15.71■□□□□ 0.11
COMMD4-225ENST00000569245 LRSAM1Q6UWE0 723 aa15.71■□□□□ 0.11
COMMD4-225ENST00000569245 CD300LGQ6UXG3 332 aa15.71■□□□□ 0.11
COMMD4-225ENST00000569245 ANKS3Q6ZW76 656 aa15.71■□□□□ 0.11
COMMD4-225ENST00000569245 KREMEN2Q8NCW0 462 aa15.71■□□□□ 0.11
COMMD4-225ENST00000569245 HDAC7Q8WUI4 952 aa15.71■□□□□ 0.11
COMMD4-225ENST00000569245 ERCC4Q92889 916 aaPredicted RBP15.71■□□□□ 0.11
COMMD4-225ENST00000569245 SMARCE1Q969G3 411 aa15.71■□□□□ 0.11
COMMD4-225ENST00000569245 GSDMAQ96QA5 445 aa15.71■□□□□ 0.11
COMMD4-225ENST00000569245 IKZF4Q9H2S9 585 aa15.71■□□□□ 0.11
COMMD4-225ENST00000569245 PIDD1Q9HB75 910 aa15.71■□□□□ 0.11
COMMD4-225ENST00000569245 OLFML3Q9NRN5 406 aa15.71■□□□□ 0.11
COMMD4-225ENST00000569245 CPSF3Q9UKF6 684 aaKnown RBP15.71■□□□□ 0.11
COMMD4-225ENST00000569245 UBQLN1Q9UMX0 589 aaKnown RBP15.71■□□□□ 0.11
COMMD4-225ENST00000569245 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.71■□□□□ 0.11
COMMD4-225ENST00000569245 FRMD3A2A2Y4 597 aa15.7■□□□□ 0.1
COMMD4-225ENST00000569245 FAM189A1O60320 539 aa15.7■□□□□ 0.1
COMMD4-225ENST00000569245 RFPL2O75678 378 aa15.7■□□□□ 0.1
COMMD4-225ENST00000569245 PPP1R37O75864 691 aa15.7■□□□□ 0.1
COMMD4-225ENST00000569245 C1RP00736 705 aa15.7■□□□□ 0.1
COMMD4-225ENST00000569245 OR1D2P34982 312 aa15.7■□□□□ 0.1
COMMD4-225ENST00000569245 CASP5P51878 434 aa15.7■□□□□ 0.1
COMMD4-225ENST00000569245 LIN9Q5TKA1 542 aa15.7■□□□□ 0.1
COMMD4-225ENST00000569245 LILRA6Q6PI73 481 aa15.7■□□□□ 0.1
COMMD4-225ENST00000569245 SASS6Q6UVJ0 657 aa15.7■□□□□ 0.1
COMMD4-225ENST00000569245 C15orf39Q6ZRI6 1047 aa15.7■□□□□ 0.1
COMMD4-225ENST00000569245 STXBP4Q6ZWJ1 553 aa15.7■□□□□ 0.1
COMMD4-225ENST00000569245 CD302Q8IX05 232 aa15.7■□□□□ 0.1
COMMD4-225ENST00000569245 TRIML1Q8N9V2 468 aa15.7■□□□□ 0.1
COMMD4-225ENST00000569245 CMASQ8NFW8 434 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-225ENST00000569245 STRA6Q9BX79 667 aa15.7■□□□□ 0.1
COMMD4-225ENST00000569245 BLZF1Q9H2G9 400 aa15.7■□□□□ 0.1
COMMD4-225ENST00000569245 CDY1Q9Y6F8 540 aa15.7■□□□□ 0.1
COMMD4-225ENST00000569245 MYH11P35749 1972 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 PVALEFA0A1B0GWK0 134 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 ADAM12O43184 909 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 KLRC4O43908 158 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 PRPF6O94906 941 aaKnown RBP15.69■□□□□ 0.1
COMMD4-225ENST00000569245 CCDC192P0DO97 292 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 CYP3A5P20815 502 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 CASP1P29466 404 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 ARPP19P56211 112 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 KCNB1Q14721 858 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 TMEM132DQ14C87 1099 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 VARS2Q5ST30 1063 aaKnown RBP15.69■□□□□ 0.1
COMMD4-225ENST00000569245 JADE1Q6IE81 842 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 CCDC149Q6ZUS6 474 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 TDRD5Q8NAT2 981 aaKnown RBP15.69■□□□□ 0.1
COMMD4-225ENST00000569245 BEST2Q8NFU1 509 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 FEZF2Q8TBJ5 459 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 NOC3LQ8WTT2 800 aaKnown RBP15.69■□□□□ 0.1
COMMD4-225ENST00000569245 SMG7Q92540 1137 aaKnown RBP15.69■□□□□ 0.1
COMMD4-225ENST00000569245 HPS3Q969F9 1004 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 TSPAN18Q96SJ8 248 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 FAM213AQ9BRX8 229 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 TMEM206Q9H813 350 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 RMND1Q9NWS8 449 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 ZDHHC7Q9NXF8 308 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 MTRRQ9UBK8 725 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 MAN1B1Q9UKM7 699 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 STYXL1Q9Y6J8 313 aa15.69■□□□□ 0.1
COMMD4-225ENST00000569245 C2CD4DB7Z1M9 353 aa15.68■□□□□ 0.1
COMMD4-225ENST00000569245 H7C4K7 107 aa15.68■□□□□ 0.1
COMMD4-225ENST00000569245 SYN3O14994 580 aa15.68■□□□□ 0.1
COMMD4-225ENST00000569245 RPN1P04843 607 aaKnown RBP15.68■□□□□ 0.1
COMMD4-225ENST00000569245 NFICP08651 508 aa15.68■□□□□ 0.1
COMMD4-225ENST00000569245 ADSSP30520 456 aa15.68■□□□□ 0.1
COMMD4-225ENST00000569245 GUCY2FP51841 1108 aa15.68■□□□□ 0.1
COMMD4-225ENST00000569245 TYRO3Q06418 890 aa15.68■□□□□ 0.1
COMMD4-225ENST00000569245 RAB33AQ14088 237 aa15.68■□□□□ 0.1
COMMD4-225ENST00000569245 ZBTB6Q15916 424 aa15.68■□□□□ 0.1
COMMD4-225ENST00000569245 PPM1LQ5SGD2 360 aa15.68■□□□□ 0.1
COMMD4-225ENST00000569245 CYP26C1Q6V0L0 522 aa15.68■□□□□ 0.1
COMMD4-225ENST00000569245 UNC13DQ70J99 1090 aa15.68■□□□□ 0.1
COMMD4-225ENST00000569245 OTOP3Q7RTS5 596 aa15.68■□□□□ 0.1
COMMD4-225ENST00000569245 TMEM130Q8N3G9 435 aa15.68■□□□□ 0.1
COMMD4-225ENST00000569245 APPL2Q8NEU8 664 aa15.68■□□□□ 0.1
COMMD4-225ENST00000569245 ACSF2Q96CM8 615 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-225ENST00000569245 FGFBP2Q9BYJ0 223 aa15.68■□□□□ 0.1
COMMD4-225ENST00000569245 BACE2Q9Y5Z0 518 aa15.68■□□□□ 0.1
COMMD4-225ENST00000569245 GPR37L1O60883 481 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 ZMYND10O75800 440 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 C8AP07357 584 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 LRPAP1P30533 357 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 NLRP12P59046 1061 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 MORC3Q14149 939 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 CTXN3Q4LDR2 81 aa15.67■□□□□ 0.1
COMMD4-225ENST00000569245 SPATA1Q5VX52 437 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms