RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	MTM1	Q13496	603 aa		4.68	□□□□□ -1.66
UBR1-209	ENST00000569243	NOMO1	Q15155	1222 aa		4.68	□□□□□ -1.66
UBR1-209	ENST00000569243	TOR2A	Q5JU69	321 aa		4.68	□□□□□ -1.66
UBR1-209	ENST00000569243	KIAA0895L	Q68EN5	471 aa		4.68	□□□□□ -1.66
UBR1-209	ENST00000569243	CMIP	Q8IY22	773 aa		4.68	□□□□□ -1.66
UBR1-209	ENST00000569243	PTCD3	Q96EY7	689 aa	Known RBP	4.68	□□□□□ -1.66
UBR1-209	ENST00000569243	HEPH	Q9BQS7	1158 aa		4.68	□□□□□ -1.66
UBR1-209	ENST00000569243	ZSWIM1	Q9BR11	485 aa		4.68	□□□□□ -1.66
UBR1-209	ENST00000569243	ZNF277	Q9NRM2	450 aa	Predicted RBP	4.68	□□□□□ -1.66
UBR1-209	ENST00000569243	DNAJC28	Q9NX36	388 aa		4.68	□□□□□ -1.66
UBR1-209	ENST00000569243	KCTD5	Q9NXV2	234 aa		4.68	□□□□□ -1.66
UBR1-209	ENST00000569243	NEU2	Q9Y3R4	380 aa		4.68	□□□□□ -1.66
UBR1-209	ENST00000569243	CCT2	P78371	535 aa	Known RBP	4.67	□□□□□ -1.66
UBR1-209	ENST00000569243	ATP8B2	P98198	1209 aa		4.67	□□□□□ -1.66
UBR1-209	ENST00000569243	SRSF2	Q01130	221 aa	Known RBP	4.67	□□□□□ -1.66
UBR1-209	ENST00000569243	SEPT2	Q15019	361 aa		4.67	□□□□□ -1.66
UBR1-209	ENST00000569243	CT47A1	Q5JQC4	288 aa	Predicted RBP	4.67	□□□□□ -1.66
UBR1-209	ENST00000569243	RNF219	Q5W0B1	726 aa	Predicted RBP	4.67	□□□□□ -1.66
UBR1-209	ENST00000569243	RUSC1-AS1	Q66K80	236 aa		4.67	□□□□□ -1.66
UBR1-209	ENST00000569243	KRT26	Q7Z3Y9	468 aa		4.67	□□□□□ -1.66
UBR1-209	ENST00000569243	STON2	Q8WXE9	905 aa		4.67	□□□□□ -1.66
UBR1-209	ENST00000569243	VTA1	Q9NP79	307 aa		4.67	□□□□□ -1.66
UBR1-209	ENST00000569243	DMRT3	Q9NQL9	472 aa		4.67	□□□□□ -1.66
UBR1-209	ENST00000569243	FBXO34	Q9NWN3	711 aa		4.67	□□□□□ -1.66
UBR1-209	ENST00000569243	C14orf119	Q9NWQ9	140 aa		4.67	□□□□□ -1.66
UBR1-209	ENST00000569243	MTO1	Q9Y2Z2	717 aa	Known RBP	4.67	□□□□□ -1.66
UBR1-209	ENST00000569243		A0A1W2PS29	197 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	TRIM75P	A6NK02	468 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	GPR39	O43194	453 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	PRSS23	O95084	383 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	BMP15	O95972	392 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	AMY1A	P04745	511 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	SRGN	P10124	158 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	DDC	P20711	480 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	FPR1	P21462	350 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	PCSK1	P29120	753 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	CCKBR	P32239	447 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	FOLR3	P41439	243 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	SOX10	P56693	466 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	NBPF8	Q3BBV2	869 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	SPATS2	Q86XZ4	545 aa	Known RBP	4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	UBR7	Q8N806	425 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243		Q8NA96	180 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	PDPR	Q8NCN5	879 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	ACTRT2	Q8TDY3	377 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	MARS2	Q96GW9	593 aa	Known RBP	4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	TIMP4	Q99727	224 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	GPR45	Q9Y5Y3	372 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	ACTL7A	Q9Y615	435 aa		4.66	□□□□□ -1.66
UBR1-209	ENST00000569243	MGST3	O14880	152 aa		4.65	□□□□□ -1.67
UBR1-209	ENST00000569243	MPPED1	O15442	326 aa		4.65	□□□□□ -1.67
UBR1-209	ENST00000569243	PROM1	O43490	865 aa		4.65	□□□□□ -1.67
UBR1-209	ENST00000569243	ORC4	O43929	436 aa		4.65	□□□□□ -1.67
UBR1-209	ENST00000569243	WT1	P19544	449 aa	Predicted RBP	4.65	□□□□□ -1.67
UBR1-209	ENST00000569243	SLC6A2	P23975	617 aa		4.65	□□□□□ -1.67
UBR1-209	ENST00000569243	CTXN1	P60606	82 aa		4.65	□□□□□ -1.67
UBR1-209	ENST00000569243	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	4.65	□□□□□ -1.67
UBR1-209	ENST00000569243	FBXO18	Q8NFZ0	1043 aa		4.65	□□□□□ -1.67
UBR1-209	ENST00000569243	C7orf25	Q9BPX7	421 aa		4.65	□□□□□ -1.67
UBR1-209	ENST00000569243	GSTO2	Q9H4Y5	243 aa		4.65	□□□□□ -1.67
UBR1-209	ENST00000569243	USP25	Q9UHP3	1055 aa		4.65	□□□□□ -1.67
UBR1-209	ENST00000569243	TMA7	Q9Y2S6	64 aa	Known RBP	4.65	□□□□□ -1.67
UBR1-209	ENST00000569243	PCDHGA2	Q9Y5H1	932 aa		4.65	□□□□□ -1.67
UBR1-209	ENST00000569243	AATK	Q6ZMQ8	1374 aa		4.65	□□□□□ -1.67
UBR1-209	ENST00000569243	CCDC78	A2IDD5	438 aa		4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	PEX1	O43933	1283 aa		4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	CLSTN1	O94985	981 aa		4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	IGKV2-30	P06310	120 aa		4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	AGXT	P21549	392 aa		4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	ERVK-21	P61565	698 aa		4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	TMPRSS15	P98073	1019 aa		4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	CREM	Q03060	361 aa		4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	FHL1	Q13642	323 aa		4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	VWA1	Q6PCB0	445 aa		4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	UBE3B	Q7Z3V4	1068 aa		4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	WDR66	Q8TBY9	1149 aa		4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	DDB2	Q92466	427 aa		4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	UROC1	Q96N76	676 aa		4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	MYOC	Q99972	504 aa		4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	LDAH	Q9H6V9	325 aa		4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	HSFX1	Q9UBD0	423 aa		4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	ENTPD2	Q9Y5L3	495 aa		4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	WASHC2A	Q641Q2	1341 aa		4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.64	□□□□□ -1.67
UBR1-209	ENST00000569243	TRGV11	A0A075B6L2	103 aa		4.63	□□□□□ -1.67
UBR1-209	ENST00000569243	PRKD3	O94806	890 aa		4.63	□□□□□ -1.67
UBR1-209	ENST00000569243	HAUS5	O94927	633 aa		4.63	□□□□□ -1.67
UBR1-209	ENST00000569243	NOMO3	P69849	1222 aa		4.63	□□□□□ -1.67
UBR1-209	ENST00000569243	SLFN5	Q08AF3	891 aa		4.63	□□□□□ -1.67
UBR1-209	ENST00000569243	NOMO2	Q5JPE7	1267 aa		4.63	□□□□□ -1.67
UBR1-209	ENST00000569243	KIAA1614	Q5VZ46	1190 aa		4.63	□□□□□ -1.67
UBR1-209	ENST00000569243	SDE2	Q6IQ49	451 aa		4.63	□□□□□ -1.67
UBR1-209	ENST00000569243	IL17RD	Q8NFM7	739 aa		4.63	□□□□□ -1.67
UBR1-209	ENST00000569243	CCHCR1	Q8TD31	782 aa		4.63	□□□□□ -1.67
UBR1-209	ENST00000569243	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.63	□□□□□ -1.67
UBR1-209	ENST00000569243	KLK15	Q9H2R5	256 aa		4.63	□□□□□ -1.67
UBR1-209	ENST00000569243	INTS13	Q9NVM9	706 aa		4.63	□□□□□ -1.67
UBR1-209	ENST00000569243	ARPP21	Q9UBL0	812 aa	Predicted RBP	4.63	□□□□□ -1.67
UBR1-209	ENST00000569243	SAP30BP	Q9UHR5	308 aa	Known RBP	4.63	□□□□□ -1.67

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