RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 TPH2Q8IWU9 490 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 SLFN12Q8IYM2 578 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 APPL2Q8NEU8 664 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 ZSWIM3Q96MP5 696 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 TMEM209Q96SK2 561 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 ESYT1Q9BSJ8 1104 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 SLC26A6Q9BXS9 759 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 FZD8Q9H461 694 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 KCNMB3Q9NPA1 279 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 CACNG4Q9UBN1 327 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 VAV3Q9UKW4 847 aa9.55□□□□□ -0.88
SMG1-216ENST00000569122 MYH15Q9Y2K3 1946 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 BCLAF3A2AJT9 711 aaKnown RBP9.54□□□□□ -0.88
SMG1-216ENST00000569122 GIPC1O14908 333 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 LYPLA2O95372 231 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 WEE1P30291 646 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 CCR2P41597 374 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 CLCNKBP51801 687 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 YARSP54577 528 aaKnown RBP9.54□□□□□ -0.88
SMG1-216ENST00000569122 EPHB3P54753 998 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 TWF1Q12792 350 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 LMAN2Q12907 356 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 PRPF4BQ13523 1007 aaKnown RBP9.54□□□□□ -0.88
SMG1-216ENST00000569122 TEAD2Q15562 447 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 NAB2Q15742 525 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 ITPRIPL2Q3MIP1 535 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 FBXO43Q4G163 708 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 CTXN3Q4LDR2 81 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 ARHGAP15Q53QZ3 475 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 POTEHQ6S545 545 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 CDR2LQ86X02 465 aaPredicted RBP9.54□□□□□ -0.88
SMG1-216ENST00000569122 DAGLBQ8NCG7 672 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 MCPH1Q8NEM0 835 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 ASAP3Q8TDY4 903 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 DYDC2Q96IM9 177 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 TCEANC2Q96MN5 208 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 XPNPEP1Q9NQW7 623 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 TOPORSQ9NS56 1045 aaPredicted RBP9.54□□□□□ -0.88
SMG1-216ENST00000569122 RGL1Q9NZL6 768 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 WRAP73Q9P2S5 460 aaPredicted RBP9.54□□□□□ -0.88
SMG1-216ENST00000569122 ZMYM5Q9UJ78 669 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 ASB3Q9Y575 518 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 NUB1Q9Y5A7 615 aa9.54□□□□□ -0.88
SMG1-216ENST00000569122 MTCL1Q9Y4B5 1905 aaKnown RBP9.54□□□□□ -0.88
SMG1-216ENST00000569122 NID2Q14112 1375 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 COL4A3Q01955 1670 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 CCDC194A0A1B0GVG4 234 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 ACKR2O00590 384 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 EXTL3O43909 919 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 SLITRK3O94933 977 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 SPINK2P20155 84 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 MARCKSP29966 332 aaPredicted RBP9.53□□□□□ -0.88
SMG1-216ENST00000569122 RPL9P32969 192 aaKnown RBP9.53□□□□□ -0.88
SMG1-216ENST00000569122 DPP6P42658 865 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 ALDH1A3P47895 512 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 SOX9P48436 509 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 SSRP1Q08945 709 aaKnown RBP9.53□□□□□ -0.88
SMG1-216ENST00000569122 MRPL58Q14197 206 aaKnown RBP9.53□□□□□ -0.88
SMG1-216ENST00000569122 CTTNQ14247 550 aaKnown RBP9.53□□□□□ -0.88
SMG1-216ENST00000569122 USP39Q53GS9 565 aaKnown RBP9.53□□□□□ -0.88
SMG1-216ENST00000569122 CDCA2Q69YH5 1023 aaPredicted RBP9.53□□□□□ -0.88
SMG1-216ENST00000569122 NCAPH2Q6IBW4 605 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 ZNF280DQ6N043 979 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 TXNDC11Q6PKC3 985 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 CPLX2Q6PUV4 134 aaKnown RBP9.53□□□□□ -0.88
SMG1-216ENST00000569122 NEK8Q86SG6 692 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 ARID3BQ8IVW6 561 aaPredicted RBP9.53□□□□□ -0.88
SMG1-216ENST00000569122 HS6ST3Q8IZP7 471 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 FBXL16Q8N461 479 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 PPP1R10Q96QC0 940 aaKnown RBP9.53□□□□□ -0.88
SMG1-216ENST00000569122 POLR3FQ9H1D9 316 aaPredicted RBP9.53□□□□□ -0.88
SMG1-216ENST00000569122 DUSP15Q9H1R2 295 aaPredicted RBP9.53□□□□□ -0.88
SMG1-216ENST00000569122 SMOC1Q9H4F8 434 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 PDZD7Q9H5P4 517 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 EBF1Q9UH73 591 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 FBXL5Q9UKA1 691 aa9.53□□□□□ -0.88
SMG1-216ENST00000569122 LNP1A1A4G5 178 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 M0R2N6 131 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 SLC37A4O43826 429 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 CCNT1O60563 726 aaKnown RBP9.52□□□□□ -0.89
SMG1-216ENST00000569122 MOSPD3O75425 235 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 DEXIO95424 95 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 SEC24AO95486 1093 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 APBB3O95704 486 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 PRKCBP05771 671 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 XBP1P17861 261 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 DRD1P21728 446 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 PXNP49023 591 aaPredicted RBP9.52□□□□□ -0.89
SMG1-216ENST00000569122 EFNA5P52803 228 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 CYP4A11Q02928 519 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 HNRNPDQ14103 355 aaKnown RBP9.52□□□□□ -0.89
SMG1-216ENST00000569122 PPP2R5AQ15172 486 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 NTRK3Q16288 839 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 INF2Q27J81 1249 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 TMEM196Q5HYL7 178 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 TCEAL6Q6IPX3 200 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 Q6ZUG5 572 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 NOSTRINQ8IVI9 506 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 SHKBP1Q8TBC3 707 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 BPIFB1Q8TDL5 484 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms