RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 NDC1Q9BTX1 674 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 TEX101Q9BY14 249 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 TMPRSS5Q9H3S3 457 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 METTL14Q9HCE5 456 aaKnown RBP4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 SLC52A1Q9NWF4 448 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 GPRC5BQ9NZH0 403 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 AJAP1Q9UKB5 411 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 INTUQ9ULD6 942 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 ZBTB21Q9ULJ3 1066 aa4.39□□□□□ -1.71
HMGB1P6-201ENST00000569046 CEP162Q5TB80 1403 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 KLHL33A6NCF5 533 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 ZNF185O15231 689 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 FZD7O75084 574 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 RPS6KA4O75676 772 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 ENDOD1O94919 500 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 SCAF4O95104 1147 aaKnown RBP4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 ZNF202O95125 648 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 ATF3P18847 181 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 EDNRBP24530 442 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 ALDH1A3P47895 512 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 ANAPC15P60006 121 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 FAM189BP81408 668 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 SP140Q13342 867 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 PTPN21Q16825 1174 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 DRICH1Q6PGQ1 229 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 FAM180AQ6UWF9 173 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 BRINP3Q76B58 766 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 CPT1CQ8TCG5 803 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 CCHCR1Q8TD31 782 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 TFAP2CQ92754 450 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 MYOCQ99972 504 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 SENP6Q9GZR1 1112 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 MMRN2Q9H8L6 949 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 HOMER2Q9NSB8 354 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 SLC23A1Q9UHI7 598 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 SERPINB13Q9UIV8 391 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 LIMCH1Q9UPQ0 1083 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 ACTL7AQ9Y615 435 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 SPATA31A6Q5VVP1 1343 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 NHSL1Q5SYE7 1610 aa4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 MARF1Q9Y4F3 1742 aaKnown RBP4.38□□□□□ -1.71
HMGB1P6-201ENST00000569046 ADGRB3O60242 1522 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 DUOX2Q9NRD8 1548 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 TMEM131LA2VDJ0 1609 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 AHDC1Q5TGY3 1603 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 FAM171A2A8MVW0 826 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 PJA2O43164 708 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 ZRANB2O95218 330 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 SLPIP03973 132 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 WASP42768 502 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 CLRN1P58418 232 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 KRT85P78386 507 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 ATP8B2P98198 1209 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 NHLH2Q02577 135 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 KLF10Q13118 480 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 MTM1Q13496 603 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 C3orf36Q3SXR2 165 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 FAM102AQ5T9C2 384 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 EFCAB12Q6NXP0 572 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 ZFPM1Q8IX07 1006 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 RHOT1Q8IXI2 618 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 ZNF276Q8N554 614 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 SSH1Q8WYL5 1049 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 MRI1Q9BV20 369 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 LANCL2Q9NS86 450 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 EIF2B4Q9UI10 523 aaKnown RBP4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 ING1Q9UK53 422 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 CHST2Q9Y4C5 530 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 IPPQ9Y573 584 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 PCDHA13Q9Y5I0 950 aa4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 NKTRP30414 1462 aaKnown RBP4.37□□□□□ -1.71
HMGB1P6-201ENST00000569046 NALCNQ8IZF0 1738 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 DRGXA6NNA5 263 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 TRIM24O15164 1050 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 HTRA2O43464 458 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 SNRPA1P09661 255 aaKnown RBP4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 RAP2AP10114 183 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 IL2RBP14784 551 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 ZSCAN20P17040 1043 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 CHN2P52757 468 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 RNASE9P60153 205 aaKnown RBP4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 RAP2BP61225 183 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 RBM6P78332 1123 aaKnown RBP4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 TARDBPQ13148 414 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 IL10RAQ13651 578 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 ATXN7L2Q5T6C5 722 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 OTUD7BQ6GQQ9 843 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 PNMA8AQ86V59 439 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 DCBLD1Q8N8Z6 715 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 SLC25A43Q8WUT9 341 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 STAG1Q8WVM7 1258 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 COA7Q96BR5 231 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 C7orf25Q9BPX7 421 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 KRTAP4-5Q9BYR2 181 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 SLC13A1Q9BZW2 595 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 MOCS1Q9NZB8 636 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 TRPM5Q9NZQ8 1165 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 POGKQ9P215 609 aa4.36□□□□□ -1.71
HMGB1P6-201ENST00000569046 RUVBL1Q9Y265 456 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms