RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 ELF1P32519 619 aa16.3■□□□□ 0.2
USB1-214ENST00000568848 PEX3P56589 373 aa16.3■□□□□ 0.2
USB1-214ENST00000568848 ZNF568Q3ZCX4 644 aa16.3■□□□□ 0.2
USB1-214ENST00000568848 CTXN3Q4LDR2 81 aa16.3■□□□□ 0.2
USB1-214ENST00000568848 PPM1JQ5JR12 505 aa16.3■□□□□ 0.2
USB1-214ENST00000568848 PDXDC1Q6P996 788 aa16.3■□□□□ 0.2
USB1-214ENST00000568848 TXNDC11Q6PKC3 985 aa16.3■□□□□ 0.2
USB1-214ENST00000568848 RNF19BQ6ZMZ0 732 aa16.3■□□□□ 0.2
USB1-214ENST00000568848 MAP4K3Q8IVH8 894 aa16.3■□□□□ 0.2
USB1-214ENST00000568848 DAW1Q8N136 415 aa16.3■□□□□ 0.2
USB1-214ENST00000568848 ZNF461Q8TAF7 563 aa16.3■□□□□ 0.2
USB1-214ENST00000568848 LRRC3BQ96PB8 259 aa16.3■□□□□ 0.2
USB1-214ENST00000568848 POLR3BQ9NW08 1133 aaPredicted RBP16.3■□□□□ 0.2
USB1-214ENST00000568848 KIF26AQ9ULI4 1882 aaPredicted RBP16.3■□□□□ 0.2
USB1-214ENST00000568848 CITO14578 2027 aa16.29■□□□□ 0.2
USB1-214ENST00000568848 FRYQ5TBA9 3013 aa16.29■□□□□ 0.2
USB1-214ENST00000568848 CHRNB1P11230 501 aa16.29■□□□□ 0.2
USB1-214ENST00000568848 XRCC6P12956 609 aaKnown RBP eCLIP16.29■□□□□ 0.2
USB1-214ENST00000568848 RBM25P49756 843 aaKnown RBP16.29■□□□□ 0.2
USB1-214ENST00000568848 GUCY2FP51841 1108 aa16.29■□□□□ 0.2
USB1-214ENST00000568848 ALKAL1Q6UXT8 129 aa16.29■□□□□ 0.2
USB1-214ENST00000568848 TTC9BQ8N6N2 239 aa16.29■□□□□ 0.2
USB1-214ENST00000568848 SHKBP1Q8TBC3 707 aa16.29■□□□□ 0.2
USB1-214ENST00000568848 ZSCAN18Q8TBC5 510 aaPredicted RBP16.29■□□□□ 0.2
USB1-214ENST00000568848 WASF1Q92558 559 aa16.29■□□□□ 0.2
USB1-214ENST00000568848 DNASE1L2Q92874 299 aa16.29■□□□□ 0.2
USB1-214ENST00000568848 ACO2Q99798 780 aaKnown RBP16.29■□□□□ 0.2
USB1-214ENST00000568848 POLR3CQ9BUI4 534 aaPredicted RBP16.29■□□□□ 0.2
USB1-214ENST00000568848 ATG2BQ96BY7 2078 aa16.29■□□□□ 0.2
USB1-214ENST00000568848 SFI1A8K8P3 1242 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 HEPACAM2A8MVW5 462 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 E9PMD0 336 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 ARNTLO00327 626 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 ABLIM1O14639 778 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 NCAM2O15394 837 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 OR52Z1P0C646 297 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 ATF2P15336 505 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 CCT6AP40227 531 aaKnown RBP16.28■□□□□ 0.2
USB1-214ENST00000568848 GRM5P41594 1212 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 MAGEA9P43362 315 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 PXNP49023 591 aaPredicted RBP16.28■□□□□ 0.2
USB1-214ENST00000568848 SIM2Q14190 667 aaPredicted RBP16.28■□□□□ 0.2
USB1-214ENST00000568848 KCNK18Q7Z418 384 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 TCEAL8Q8IYN2 117 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 SMARCD2Q92925 531 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 SECISBP2LQ93073 1101 aaKnown RBP16.28■□□□□ 0.2
USB1-214ENST00000568848 NELL2Q99435 816 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 RTKNQ9BST9 563 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 RUSC1Q9BVN2 902 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 SMOC1Q9H4F8 434 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 PTPRHQ9HD43 1115 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 AVENQ9NQS1 362 aaPredicted RBP16.28■□□□□ 0.2
USB1-214ENST00000568848 RXFP3Q9NSD7 469 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 KIAA1024Q9UPX6 916 aa16.28■□□□□ 0.2
USB1-214ENST00000568848 MRPS17Q9Y2R5 130 aaKnown RBP16.28■□□□□ 0.2
USB1-214ENST00000568848 CEP295Q9C0D2 2601 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 A0A1W2PRU2 124 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 K7ERI5 159 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 ADRB1P08588 477 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 PSMC3P17980 439 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 RPA1P27694 616 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 CDC25AP30304 524 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 MCM4P33991 863 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 NPTX2P47972 431 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 RAD51AP2Q09MP3 1159 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 MRPL58Q14197 206 aaKnown RBP16.27■□□□□ 0.2
USB1-214ENST00000568848 ST3GAL2Q16842 350 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 XKR4Q5GH76 650 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 PKN3Q6P5Z2 889 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 DDX12PQ92771 950 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 IFT74Q96LB3 600 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 UROC1Q96N76 676 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 TBC1D32Q96NH3 1257 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 TMEM209Q96SK2 561 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 CCDC94Q9BW85 323 aaPredicted RBP16.27■□□□□ 0.2
USB1-214ENST00000568848 DNAJC25Q9H1X3 360 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 SLITRK6Q9H5Y7 841 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 SEMA4GQ9NTN9 838 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 DDX19AQ9NUU7 478 aaKnown RBP16.27■□□□□ 0.2
USB1-214ENST00000568848 ANKFY1Q9P2R3 1169 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 TNFSF13BQ9Y275 285 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 SLC27A5Q9Y2P5 690 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 YIPF1Q9Y548 306 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 NUB1Q9Y5A7 615 aa16.27■□□□□ 0.2
USB1-214ENST00000568848 PRR5-ARHGAP8B1AHC4 643 aa16.26■□□□□ 0.19
USB1-214ENST00000568848 K7ESF4 209 aa16.26■□□□□ 0.19
USB1-214ENST00000568848 PPEF2O14830 753 aa16.26■□□□□ 0.19
USB1-214ENST00000568848 ZNF263O14978 683 aa16.26■□□□□ 0.19
USB1-214ENST00000568848 SLC16A4O15374 487 aa16.26■□□□□ 0.19
USB1-214ENST00000568848 TRAPPC3O43617 180 aa16.26■□□□□ 0.19
USB1-214ENST00000568848 HIP1RO75146 1068 aa16.26■□□□□ 0.19
USB1-214ENST00000568848 CPB1P15086 417 aa16.26■□□□□ 0.19
USB1-214ENST00000568848 YARSP54577 528 aaKnown RBP16.26■□□□□ 0.19
USB1-214ENST00000568848 ARHGAP8P85298 464 aa16.26■□□□□ 0.19
USB1-214ENST00000568848 MAPK7Q13164 816 aa16.26■□□□□ 0.19
USB1-214ENST00000568848 SF3A2Q15428 464 aaKnown RBP16.26■□□□□ 0.19
USB1-214ENST00000568848 CYP4A22Q5TCH4 519 aa16.26■□□□□ 0.19
USB1-214ENST00000568848 PRR23CQ6ZRP0 262 aa16.26■□□□□ 0.19
USB1-214ENST00000568848 IRF7Q92985 503 aa16.26■□□□□ 0.19
USB1-214ENST00000568848 HAPLN2Q9GZV7 340 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms