RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 AGAP1Q9UPQ3 857 aa10.93□□□□□ -0.66
PKM-221ENST00000568743 TDRD15B5MCY1 1934 aaKnown RBP10.93□□□□□ -0.66
PKM-221ENST00000568743 SZT2Q5T011 3432 aa10.93□□□□□ -0.66
PKM-221ENST00000568743 TRIP11Q15643 1979 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 ANK1P16157 1881 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 NLRC5Q86WI3 1866 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 ANO9A1A5B4 782 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 PIRO00625 290 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 SPTLC1O15269 473 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 CA8P35219 290 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 IRS1P35568 1242 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 GCLMP48507 274 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 ERVFC1P60507 584 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 CLDN10P78369 228 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 PPP3CAQ08209 521 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 BIRC3Q13489 604 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 CAMK1Q14012 370 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 TIGD5Q53EQ6 642 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 TDRD10Q5VZ19 366 aaKnown RBP10.92□□□□□ -0.66
PKM-221ENST00000568743 PLPP4Q5VZY2 271 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 TRAPPC11Q7Z392 1133 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 DDX53Q86TM3 631 aaKnown RBP10.92□□□□□ -0.66
PKM-221ENST00000568743 IRF2BP1Q8IU81 584 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 AOPEPQ8N6M6 819 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 CXorf38Q8TB03 319 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 ENOX1Q8TC92 643 aaKnown RBP10.92□□□□□ -0.66
PKM-221ENST00000568743 ELMO3Q96BJ8 720 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 CNOT6LQ96LI5 555 aaKnown RBP10.92□□□□□ -0.66
PKM-221ENST00000568743 CDX2Q99626 313 aaPredicted RBP10.92□□□□□ -0.66
PKM-221ENST00000568743 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.92□□□□□ -0.66
PKM-221ENST00000568743 ENTPD7Q9NQZ7 604 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 MTMR10Q9NXD2 777 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 PUF60Q9UHX1 559 aaKnown RBP10.92□□□□□ -0.66
PKM-221ENST00000568743 ITGA11Q9UKX5 1188 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 NUB1Q9Y5A7 615 aa10.92□□□□□ -0.66
PKM-221ENST00000568743 COL4A4P53420 1690 aaPredicted RBP10.92□□□□□ -0.66
PKM-221ENST00000568743 CDH23Q9H251 3354 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 SF3B1O75533 1304 aaKnown RBP eCLIP10.91□□□□□ -0.66
PKM-221ENST00000568743 CARNS1A5YM72 827 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 TMEM189-UBE2V1I3L0A0 370 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 C2CD2LO14523 706 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 PHACTR2O75167 634 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 CLSTN1O94985 981 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 VNN1O95497 513 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 FGFR1OPO95684 399 aaKnown RBP10.91□□□□□ -0.66
PKM-221ENST00000568743 EFEMP2O95967 443 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 CST3P01034 146 aaPredicted RBP10.91□□□□□ -0.66
PKM-221ENST00000568743 TKTP29401 623 aaKnown RBP10.91□□□□□ -0.66
PKM-221ENST00000568743 LILRA4P59901 499 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 RBP5P82980 135 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 CT47A1Q5JQC4 288 aaPredicted RBP10.91□□□□□ -0.66
PKM-221ENST00000568743 FAM171A1Q5VUB5 890 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 TMC7Q7Z402 723 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 FRMD5Q7Z6J6 570 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 USP37Q86T82 979 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 CEP57Q86XR8 500 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 MICALL1Q8N3F8 863 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 MICAL1Q8TDZ2 1067 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 SLC35C1Q96A29 364 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 TCF25Q9BQ70 676 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 HERC2P3Q9BVR0 1158 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 ZBP1Q9H171 429 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 THAP9Q9H5L6 903 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 METTL14Q9HCE5 456 aaKnown RBP10.91□□□□□ -0.66
PKM-221ENST00000568743 TLR9Q9NR96 1032 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 SAMSN1Q9NSI8 373 aaKnown RBP10.91□□□□□ -0.66
PKM-221ENST00000568743 LZTS1Q9Y250 596 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 NFE2L3Q9Y4A8 694 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 TIMM13Q9Y5L4 95 aaPredicted RBP10.91□□□□□ -0.66
PKM-221ENST00000568743 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.91□□□□□ -0.66
PKM-221ENST00000568743 PDCD11Q14690 1871 aaKnown RBP10.91□□□□□ -0.66
PKM-221ENST00000568743 TRANK1O15050 2925 aa10.91□□□□□ -0.66
PKM-221ENST00000568743 PLXNA4Q9HCM2 1894 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 HIDE1A8MVS5 230 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 IKBKBO14920 756 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 FSCN2O14926 492 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 LRRN2O75325 713 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 GNA14O95837 355 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 HLA-DRAP01903 254 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 C4BPAP04003 597 aaKnown RBP10.9□□□□□ -0.66
PKM-221ENST00000568743 SOD2P04179 222 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 PIK3CAP42336 1068 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 GLUD2P49448 558 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 AARSP49588 968 aaKnown RBP eCLIP10.9□□□□□ -0.662e-6■□□□□ 9.9
PKM-221ENST00000568743 TAF6P49848 677 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 MYL6P60660 151 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 MYL5Q02045 173 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 UBE3AQ05086 875 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 TRPC3Q13507 836 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 NCOA4Q13772 614 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 PTPROQ16827 1216 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 ZACNQ401N2 412 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 CBWD6Q4V339 395 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 CBWD3Q5JTY5 395 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 RTP2Q5QGT7 225 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 CBWD5Q5RIA9 395 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 PRSS55Q6UWB4 352 aaPredicted RBP10.9□□□□□ -0.66
PKM-221ENST00000568743 DSTYKQ6XUX3 929 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 SV2AQ7L0J3 742 aa10.9□□□□□ -0.66
PKM-221ENST00000568743 ADGRD2Q7Z7M1 963 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms