RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 ZNF687Q8N1G0 1237 aa17.24■□□□□ 0.35
HERPUD1-215ENST00000568676 FAM3CQ92520 227 aa17.24■□□□□ 0.35
HERPUD1-215ENST00000568676 SUSD3Q96L08 255 aa17.24■□□□□ 0.35
HERPUD1-215ENST00000568676 ARHGAP28Q9P2N2 729 aa17.24■□□□□ 0.35
HERPUD1-215ENST00000568676 LRWD1Q9UFC0 647 aa17.24■□□□□ 0.35
HERPUD1-215ENST00000568676 FBXL5Q9UKA1 691 aa17.24■□□□□ 0.35
HERPUD1-215ENST00000568676 USP18Q9UMW8 372 aa17.24■□□□□ 0.35
HERPUD1-215ENST00000568676 GPR179Q6PRD1 2367 aa17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 SHISA7A6NL88 538 aa17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 CCDC169A6NNP5 214 aa17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 FOXD2O60548 495 aaPredicted RBP17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 PROZP22891 400 aa17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 NPTX2P47972 431 aa17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 ARPP19P56211 112 aa17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 PEX3P56589 373 aa17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 GRM2Q14416 872 aa17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 ZNF174Q15697 407 aa17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 TTC38Q5R3I4 469 aa17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 TSSK4Q6SA08 328 aa17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 MPZL3Q6UWV2 235 aa17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 CEP120Q8N960 986 aa17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 C8orf76Q96K31 380 aa17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 TCHPQ9BT92 498 aa17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 TIPINQ9BVW5 301 aa17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 ASAH2Q9NR71 780 aa17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 NOL7Q9UMY1 257 aaKnown RBP17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 NDRG2Q9UN36 371 aaKnown RBP17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 KIAA1024Q9UPX6 916 aa17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 DNM3Q9UQ16 869 aa17.23■□□□□ 0.35
HERPUD1-215ENST00000568676 ZNF263O14978 683 aa17.22■□□□□ 0.35
HERPUD1-215ENST00000568676 SEC24AO95486 1093 aa17.22■□□□□ 0.35
HERPUD1-215ENST00000568676 TDGF1P13385 188 aa17.22■□□□□ 0.35
HERPUD1-215ENST00000568676 TGM1P22735 817 aa17.22■□□□□ 0.35
HERPUD1-215ENST00000568676 GDI1P31150 447 aa17.22■□□□□ 0.35
HERPUD1-215ENST00000568676 CNR2P34972 360 aa17.22■□□□□ 0.35
HERPUD1-215ENST00000568676 FOSBP53539 338 aa17.22■□□□□ 0.35
HERPUD1-215ENST00000568676 PLD1Q13393 1074 aa17.22■□□□□ 0.35
HERPUD1-215ENST00000568676 POTEHQ6S545 545 aa17.22■□□□□ 0.35
HERPUD1-215ENST00000568676 VITQ6UXI7 678 aa17.22■□□□□ 0.35
HERPUD1-215ENST00000568676 MFSD6LQ8IWD5 586 aa17.22■□□□□ 0.35
HERPUD1-215ENST00000568676 TCEAL4Q96EI5 215 aa17.22■□□□□ 0.35
HERPUD1-215ENST00000568676 ZMAT2Q96NC0 199 aaKnown RBP17.22■□□□□ 0.35
HERPUD1-215ENST00000568676 LLPHQ9BRT6 129 aaKnown RBP17.22■□□□□ 0.35
HERPUD1-215ENST00000568676 KMT5AQ9NQR1 393 aa17.22■□□□□ 0.35
HERPUD1-215ENST00000568676 DDX19AQ9NUU7 478 aaKnown RBP17.22■□□□□ 0.35
HERPUD1-215ENST00000568676 PIAS3Q9Y6X2 628 aa17.22■□□□□ 0.35
HERPUD1-215ENST00000568676 RETP07949 1114 aa17.21■□□□□ 0.35
HERPUD1-215ENST00000568676 MARCKSP29966 332 aaPredicted RBP17.21■□□□□ 0.35
HERPUD1-215ENST00000568676 MCM4P33991 863 aa17.21■□□□□ 0.35
HERPUD1-215ENST00000568676 CCR2P41597 374 aa17.21■□□□□ 0.35
HERPUD1-215ENST00000568676 NEK4P51957 841 aa17.21■□□□□ 0.35
HERPUD1-215ENST00000568676 OSTNP61366 133 aa17.21■□□□□ 0.35
HERPUD1-215ENST00000568676 GNL2Q13823 731 aaKnown RBP17.21■□□□□ 0.35
HERPUD1-215ENST00000568676 LRRC32Q14392 662 aa17.21■□□□□ 0.35
HERPUD1-215ENST00000568676 KCTD17Q8N5Z5 321 aa17.21■□□□□ 0.35
HERPUD1-215ENST00000568676 IGSF22Q8N9C0 903 aa17.21■□□□□ 0.35
HERPUD1-215ENST00000568676 DDX12PQ92771 950 aa17.21■□□□□ 0.35
HERPUD1-215ENST00000568676 NTPCRQ9BSD7 190 aaKnown RBP17.21■□□□□ 0.35
HERPUD1-215ENST00000568676 TARS2Q9BW92 718 aaKnown RBP17.21■□□□□ 0.35
HERPUD1-215ENST00000568676 LMAN1LQ9HAT1 526 aa17.21■□□□□ 0.35
HERPUD1-215ENST00000568676 PCDHB8Q9UN66 801 aa17.21■□□□□ 0.35
HERPUD1-215ENST00000568676 NCOR2Q9Y618 2525 aa17.21■□□□□ 0.35
HERPUD1-215ENST00000568676 LAD1O00515 517 aa17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 TOM1L1O75674 476 aa17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 PAPSS2O95340 614 aaPredicted RBP17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 CPB1P15086 417 aa17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 CXCL12P48061 93 aa17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 GUCY1B3Q02153 619 aa17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 TWF1Q12792 350 aa17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 STRN3Q13033 797 aa17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 ECM1Q16610 540 aa17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 KRT79Q5XKE5 535 aa17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 SPEM1Q8N4L4 309 aa17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 BEST2Q8NFU1 509 aa17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 FBXO18Q8NFZ0 1043 aa17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 ZSCAN18Q8TBC5 510 aaPredicted RBP17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 NETO1Q8TDF5 533 aa17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 CSGALNACT1Q8TDX6 532 aa17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 SNX29Q8TEQ0 813 aa17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 TBC1D32Q96NH3 1257 aa17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 C8orf33Q9H7E9 229 aaPredicted RBP17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 PLEKHA5Q9HAU0 1116 aa17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 CEP72Q9P209 647 aa17.2■□□□□ 0.34
HERPUD1-215ENST00000568676 COL4A2P08572 1712 aa17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 ABLIM1O14639 778 aa17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 CHADO15335 359 aa17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 HIP1RO75146 1068 aa17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 OAZ2O95190 189 aa17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 CHRNB1P11230 501 aa17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 MYL4P12829 197 aa17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 SMTNP53814 917 aa17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 HMGN5P82970 282 aaKnown RBP17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 YWHAHQ04917 246 aaPredicted RBP17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 ZPBP2Q6X784 338 aa17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 TAS1R3Q7RTX0 852 aa17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 YAF2Q8IY57 180 aa17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 DAW1Q8N136 415 aa17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 C4orf32Q8N8J7 132 aa17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 SPIRE2Q8WWL2 714 aa17.19■□□□□ 0.34
HERPUD1-215ENST00000568676 CNTNAP3BQ96NU0 1288 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms