RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 SMIM28A0A1B0GU29 152 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 ARHGEF35A5YM69 484 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 PODXLO00592 558 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 GDF9O60383 454 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 PFKFB2O60825 505 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 MED24O75448 989 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 SEC24AO95486 1093 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 VIPR2P41587 438 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 EPHA5P54756 1037 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 SOX4Q06945 474 aaPredicted RBP12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 DMWDQ09019 674 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 CTXN3Q4LDR2 81 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 XKR4Q5GH76 650 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 NT5DC1Q5TFE4 455 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 IL31Q6EBC2 164 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 ZNF280DQ6N043 979 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 MFSD6LQ8IWD5 586 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 CSGALNACT1Q8TDX6 532 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 E2F7Q96AV8 911 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 IFT74Q96LB3 600 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 POLR3CQ9BUI4 534 aaPredicted RBP12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 CCDC94Q9BW85 323 aaPredicted RBP12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 SLITRK6Q9H5Y7 841 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 C8orf33Q9H7E9 229 aaPredicted RBP12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 AFF4Q9UHB7 1163 aaKnown RBP12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 FBXL5Q9UKA1 691 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 ANGPTL2Q9UKU9 493 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 MAFFQ9ULX9 164 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 NUB1Q9Y5A7 615 aa12.95□□□□□ -0.34
GTF3C1-209ENST00000568569 HEPACAM2A8MVW5 462 aa12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 K7ESF4 209 aa12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 WNT7AO00755 349 aa12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 DTNBO60941 627 aa12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 MOSPD3O75425 235 aa12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 CTDNEP1O95476 244 aa12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 MYL4P12829 197 aa12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 GRM5P41594 1212 aa12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 KPNA1P52294 538 aaPredicted RBP12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 TWF1Q12792 350 aa12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 SRSF5Q13243 272 aaKnown RBP12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 MRPL58Q14197 206 aaKnown RBP12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 CEP68Q76N32 757 aa12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 YAF2Q8IY57 180 aa12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 HS6ST3Q8IZP7 471 aa12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 KIFAP3Q92845 792 aa12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 GPR88Q9GZN0 384 aa12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 TMEM60Q9H2L4 133 aa12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 CEP72Q9P209 647 aa12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 TPCN1Q9ULQ1 816 aa12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 TNFSF13BQ9Y275 285 aa12.94□□□□□ -0.34
GTF3C1-209ENST00000568569 NCANO14594 1321 aa12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 BTBD18B2RXH4 712 aa12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 CHADO15335 359 aa12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 CPB1P15086 417 aa12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 GJA1P17302 382 aa12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 RPA1P27694 616 aa12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 PMLP29590 882 aa12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 HOXA6P31267 233 aa12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 RPL9P32969 192 aaKnown RBP12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 LIMK1P53667 647 aa12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 FCHO2Q0JRZ9 810 aa12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 TEAD2Q15562 447 aa12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 ZNF568Q3ZCX4 644 aa12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 AASDHQ4L235 1098 aaPredicted RBP12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 HEATR6Q6AI08 1181 aaKnown RBP12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 ALKAL1Q6UXT8 129 aa12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 DIS3L2Q8IYB7 885 aaKnown RBP12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 FAM160A2Q8N612 972 aaPredicted RBP12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 CEP120Q8N960 986 aa12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 APPL2Q8NEU8 664 aa12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 ERMNQ8TAM6 284 aa12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 SUSD3Q96L08 255 aa12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 CDT1Q9H211 546 aa12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 RBM12Q9NTZ6 932 aaKnown RBP12.93□□□□□ -0.34
GTF3C1-209ENST00000568569 CEP295Q9C0D2 2601 aa12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 FRYQ5TBA9 3013 aa12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 SLC38A8A6NNN8 435 aa12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 K7ERI5 159 aa12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 FDPSP14324 419 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 KCNE1P15382 129 aa12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 MCM7P33993 719 aa12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 OSTNP61366 133 aa12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 SHC2P98077 582 aa12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 DGKKQ5KSL6 1271 aa12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 Q6ZS52 159 aa12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 RALGPS2Q86X27 583 aaPredicted RBP12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 C12orf50Q8NA57 414 aaPredicted RBP12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 SHKBP1Q8TBC3 707 aa12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 FAM200AQ8TCP9 573 aa12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 ZMAT2Q96NC0 199 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 ACAP3Q96P50 834 aa12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 CNTN3Q9P232 1028 aa12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 YIPF1Q9Y548 306 aa12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 ASPMQ8IZT6 3477 aa12.92□□□□□ -0.34
GTF3C1-209ENST00000568569 PHLPP2Q6ZVD8 1323 aa12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 FAM208BQ5VWN6 2430 aa12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 COL4A2P08572 1712 aa12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 A0A1W2PRU2 124 aa12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 MYBPHLA2RUH7 354 aa12.91□□□□□ -0.34
GTF3C1-209ENST00000568569 SPECC1L-ADORA2AF8WAN1 911 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms