RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 SIX4Q9UIU6 781 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 AGAP1Q9UPQ3 857 aa8.28□□□□□ -1.08
SCAPER-221ENST00000568549 MRPL42Q9Y6G3 142 aaKnown RBP8.28□□□□□ -1.08
SCAPER-221ENST00000568549 VWA8A3KMH1 1905 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 ANO9A1A5B4 782 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 GTPBP10A4D1E9 387 aaKnown RBP8.27□□□□□ -1.09
SCAPER-221ENST00000568549 LCHNA4D1U4 455 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 CARNS1A5YM72 827 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 GOLGA6L3A6NEY3 463 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 PIRO00625 290 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 NRP1O14786 923 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 PPEF2O14830 753 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 CBFA2T2O43439 604 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 CST3P01034 146 aaPredicted RBP8.27□□□□□ -1.09
SCAPER-221ENST00000568549 ALDH2P05091 517 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 TPM3P06753 285 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 LAG3P18627 525 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 ATICP31939 592 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 PNPLA4P41247 253 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 SLC11A1P49279 550 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 ALDH7A1P49419 539 aaKnown RBP8.27□□□□□ -1.09
SCAPER-221ENST00000568549 BCAR1P56945 870 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 MYL6P60660 151 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 UBXN1Q04323 297 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 MYO1EQ12965 1108 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 RAB30Q15771 203 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 UPP1Q16831 310 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 EXOC3L4Q17RC7 722 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 SV2CQ496J9 727 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 EPC2Q52LR7 807 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 SARM1Q6SZW1 724 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 GBP6Q6ZN66 633 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 LRRC52Q8N7C0 313 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 COLGALT1Q8NBJ5 622 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 CCDC150Q8NCX0 1101 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 CXorf38Q8TB03 319 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 TAS1R2Q8TE23 839 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 RABGGTAQ92696 567 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 ZNF560Q96MR9 790 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 ZNF558Q96NG5 402 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 NAP1L5Q96NT1 182 aaPredicted RBP8.27□□□□□ -1.09
SCAPER-221ENST00000568549 PAAF1Q9BRP4 392 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 COLEC11Q9BWP8 271 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 IMPG2Q9BZV3 1241 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 AAASQ9NRG9 546 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 RAB20Q9NX57 234 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 IFNKQ9P0W0 207 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 GCNT4Q9P109 453 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 FAN1Q9Y2M0 1017 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 PRG3Q9Y2Y8 225 aaPredicted RBP8.27□□□□□ -1.09
SCAPER-221ENST00000568549 COQ4Q9Y3A0 265 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 PCDHA11Q9Y5I1 949 aa8.27□□□□□ -1.09
SCAPER-221ENST00000568549 FSD2A1L4K1 749 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 NT5C1B-RDH14C9J2C7 533 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 TMEM189-UBE2V1I3L0A0 370 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 TEX33O43247 280 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 AP5Z1O43299 807 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 B3GAT3O94766 335 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 KIF4AO95239 1232 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 STAU1O95793 577 aaKnown RBP8.26□□□□□ -1.09
SCAPER-221ENST00000568549 CA3P07451 260 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 GALTP07902 379 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 MYOGP15173 224 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 PBX3P40426 434 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 TAF6P49848 677 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 NR1I3Q14994 352 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 SGSM1Q2NKQ1 1148 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 ZNF699Q32M78 642 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 WDR44Q5JSH3 913 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 SCARA3Q6AZY7 606 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 DCLRE1AQ6PJP8 1040 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 KCNT2Q6UVM3 1135 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 EHBP1Q8NDI1 1231 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 C3orf58Q8NDZ4 430 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 HASPINQ8TF76 798 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 TAF4BQ92750 862 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 SEMA4DQ92854 862 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 CLP1Q92989 425 aaKnown RBP8.26□□□□□ -1.09
SCAPER-221ENST00000568549 HPDLQ96IR7 371 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 PCMTD1Q96MG8 357 aaPredicted RBP8.26□□□□□ -1.09
SCAPER-221ENST00000568549 DCBLD2Q96PD2 775 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 CRACR2AQ9BSW2 395 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 PI4K2AQ9BTU6 479 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 PBX4Q9BYU1 374 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 TRIM5Q9C035 493 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 XPO4Q9C0E2 1151 aaKnown RBP8.26□□□□□ -1.09
SCAPER-221ENST00000568549 INTS2Q9H0H0 1204 aaKnown RBP8.26□□□□□ -1.09
SCAPER-221ENST00000568549 GRPEL1Q9HAV7 217 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.26□□□□□ -1.09
SCAPER-221ENST00000568549 MSRAQ9UJ68 235 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 YBX2Q9Y2T7 364 aaKnown RBP8.26□□□□□ -1.09
SCAPER-221ENST00000568549 RWDD3Q9Y3V2 267 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 NUB1Q9Y5A7 615 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 PCDHB12Q9Y5F1 795 aa8.26□□□□□ -1.09
SCAPER-221ENST00000568549 LAMA2P24043 3122 aaKnown RBP8.26□□□□□ -1.09
SCAPER-221ENST00000568549 COL4A4P53420 1690 aaPredicted RBP8.25□□□□□ -1.09
SCAPER-221ENST00000568549 A0A1W2PPC1 479 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 LINC01553A4QN01 128 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 KPNA7A9QM74 516 aa8.25□□□□□ -1.09
SCAPER-221ENST00000568549 F8W810 466 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms