RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 ZNF516Q92618 1163 aa18.2■□□□□ 0.5
VAC14-210ENST00000568548 RBM15Q96T37 977 aaKnown RBP eCLIP18.2■□□□□ 0.5
VAC14-210ENST00000568548 DCLK3Q9C098 648 aa18.2■□□□□ 0.5
VAC14-210ENST00000568548 STMN4Q9H169 189 aaPredicted RBP18.2■□□□□ 0.5
VAC14-210ENST00000568548 VPS33BQ9H267 617 aa18.2■□□□□ 0.5
VAC14-210ENST00000568548 LRRC19Q9H756 370 aa18.2■□□□□ 0.5
VAC14-210ENST00000568548 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.2■□□□□ 0.54e-7■■■■□ 21.9
VAC14-210ENST00000568548 NKIRAS1Q9NYS0 192 aa18.2■□□□□ 0.5
VAC14-210ENST00000568548 STK24Q9Y6E0 443 aa18.2■□□□□ 0.5
VAC14-210ENST00000568548 SLC26A4O43511 780 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 GZMAP12544 262 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 NRLP54845 237 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 COPS2P61201 443 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 TXNRD3NBQ6F5E7 133 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 TMEM270Q6UE05 265 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 TMEM130Q8N3G9 435 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 PLCD4Q9BRC7 762 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 HAO1Q9UJM8 370 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 UMODL1Q5DID0 1318 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 FSCN2O14926 492 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 HSPA6P17066 643 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 KRT15P19012 456 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 WDR4P57081 412 aaKnown RBP18.19■□□□□ 0.5
VAC14-210ENST00000568548 ANO5Q75V66 913 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 TMEM161BQ8NDZ6 487 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 WNK4Q96J92 1243 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 ZNF668Q96K58 619 aaPredicted RBP18.19■□□□□ 0.5
VAC14-210ENST00000568548 CEP170P1Q96L14 293 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 RUNDC3BQ96NL0 473 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 VPS37BQ9H9H4 285 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 ZNF148Q9UQR1 794 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 RPS6P62753 249 aaKnown RBP18.19■□□□□ 0.5
VAC14-210ENST00000568548 NFIL3Q16649 462 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 CYP1B1Q16678 543 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 CLEC16AQ2KHT3 1053 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 DALRD3Q5D0E6 543 aaKnown RBP18.19■□□□□ 0.5
VAC14-210ENST00000568548 MCOLN2Q8IZK6 566 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 ATP6V0A4Q9HBG4 840 aa18.19■□□□□ 0.5
VAC14-210ENST00000568548 AGO4Q9HCK5 861 aaKnown RBP18.19■□□□□ 0.5
VAC14-210ENST00000568548 DNAH12Q6ZR08 3092 aa18.18■□□□□ 0.5
VAC14-210ENST00000568548 A0A1W2PPM1 405 aa18.18■□□□□ 0.5
VAC14-210ENST00000568548 GAS8O95995 478 aa18.18■□□□□ 0.5
VAC14-210ENST00000568548 SESN3P58005 492 aa18.18■□□□□ 0.5
VAC14-210ENST00000568548 OVGP1Q12889 678 aa18.18■□□□□ 0.5
VAC14-210ENST00000568548 PKN2Q16513 984 aaKnown RBP18.18■□□□□ 0.5
VAC14-210ENST00000568548 B3GNT9Q6UX72 402 aa18.18■□□□□ 0.5
VAC14-210ENST00000568548 TRMT10CQ7L0Y3 403 aaKnown RBP18.18■□□□□ 0.5
VAC14-210ENST00000568548 ERP27Q96DN0 273 aa18.18■□□□□ 0.5
VAC14-210ENST00000568548 RANBP17Q9H2T7 1088 aaKnown RBP18.18■□□□□ 0.5
VAC14-210ENST00000568548 KLHL14Q9P2G3 628 aa18.18■□□□□ 0.5
VAC14-210ENST00000568548 DNPEPQ9ULA0 475 aa18.18■□□□□ 0.5
VAC14-210ENST00000568548 ATAD5Q96QE3 1844 aa18.18■□□□□ 0.5
VAC14-210ENST00000568548 WNT10BO00744 389 aa18.18■□□□□ 0.5
VAC14-210ENST00000568548 CBX6O95503 412 aa18.18■□□□□ 0.5
VAC14-210ENST00000568548 NSFP46459 744 aaKnown RBP18.18■□□□□ 0.5
VAC14-210ENST00000568548 GTF2BQ00403 316 aa18.18■□□□□ 0.5
VAC14-210ENST00000568548 CKAP2Q8WWK9 683 aa18.18■□□□□ 0.5
VAC14-210ENST00000568548 ANKFY1Q9P2R3 1169 aa18.18■□□□□ 0.5
VAC14-210ENST00000568548 GRID1Q9ULK0 1009 aa18.18■□□□□ 0.5
VAC14-210ENST00000568548 C15orf41Q9Y2V0 281 aa18.18■□□□□ 0.5
VAC14-210ENST00000568548 PTPRJQ12913 1337 aa18.17■□□□□ 0.5
VAC14-210ENST00000568548 EXOC1LA0A1B0GW35 172 aa18.17■□□□□ 0.5
VAC14-210ENST00000568548 TGFB2P61812 414 aa18.17■□□□□ 0.5
VAC14-210ENST00000568548 EFTUD2Q15029 972 aaKnown RBP eCLIP18.17■□□□□ 0.5
VAC14-210ENST00000568548 MIS18BP1Q6P0N0 1132 aa18.17■□□□□ 0.5
VAC14-210ENST00000568548 RHBDF2Q6PJF5 856 aa18.17■□□□□ 0.5
VAC14-210ENST00000568548 JDP2Q8WYK2 163 aa18.17■□□□□ 0.5
VAC14-210ENST00000568548 P3H4Q92791 437 aa18.17■□□□□ 0.5
VAC14-210ENST00000568548 SPDL1Q96EA4 605 aa18.17■□□□□ 0.5
VAC14-210ENST00000568548 DDX27Q96GQ7 796 aaKnown RBP18.17■□□□□ 0.5
VAC14-210ENST00000568548 GABBR1Q9UBS5 961 aa18.17■□□□□ 0.5
VAC14-210ENST00000568548 DCTN4Q9UJW0 460 aa18.17■□□□□ 0.5
VAC14-210ENST00000568548 FDX1P10109 184 aa18.17■□□□□ 0.5
VAC14-210ENST00000568548 ITIH2P19823 946 aa18.17■□□□□ 0.5
VAC14-210ENST00000568548 MSH2P43246 934 aa18.17■□□□□ 0.5
VAC14-210ENST00000568548 HADHBP55084 474 aaKnown RBP18.17■□□□□ 0.5
VAC14-210ENST00000568548 DMP1Q13316 513 aaPredicted RBP18.17■□□□□ 0.5
VAC14-210ENST00000568548 TNFAIP8L3Q5GJ75 292 aa18.17■□□□□ 0.5
VAC14-210ENST00000568548 FKBP1CQ5VVH2 108 aa18.17■□□□□ 0.5
VAC14-210ENST00000568548 CIAPIN1Q6FI81 312 aa18.17■□□□□ 0.5
VAC14-210ENST00000568548 MTMR14Q8NCE2 650 aa18.17■□□□□ 0.5
VAC14-210ENST00000568548 OSBPL8Q9BZF1 889 aa18.17■□□□□ 0.5
VAC14-210ENST00000568548 NKX1-2Q9UD57 310 aaPredicted RBP18.17■□□□□ 0.5
VAC14-210ENST00000568548 ZMYND8Q9ULU4 1186 aaPredicted RBP18.17■□□□□ 0.5
VAC14-210ENST00000568548 TAC1P20366 129 aa18.16■□□□□ 0.5
VAC14-210ENST00000568548 KIFAP3Q92845 792 aa18.16■□□□□ 0.5
VAC14-210ENST00000568548 TMEM143Q96AN5 459 aa18.16■□□□□ 0.5
VAC14-210ENST00000568548 ZNF570Q96NI8 536 aa18.16■□□□□ 0.5
VAC14-210ENST00000568548 SERPINB12Q96P63 405 aa18.16■□□□□ 0.5
VAC14-210ENST00000568548 RMDN3Q96TC7 470 aa18.16■□□□□ 0.5
VAC14-210ENST00000568548 RIT2Q99578 217 aa18.16■□□□□ 0.5
VAC14-210ENST00000568548 MYLK2Q9H1R3 596 aa18.16■□□□□ 0.5
VAC14-210ENST00000568548 ADAM22Q9P0K1 906 aa18.16■□□□□ 0.5
VAC14-210ENST00000568548 SYNPO2Q9UMS6 1093 aa18.16■□□□□ 0.5
VAC14-210ENST00000568548 ARL2BPQ9Y2Y0 163 aa18.16■□□□□ 0.5
VAC14-210ENST00000568548 ZNF536O15090 1300 aa18.16■□□□□ 0.5
VAC14-210ENST00000568548 PEX10O60683 326 aa18.16■□□□□ 0.5
VAC14-210ENST00000568548 MYCNP04198 464 aaPredicted RBP18.16■□□□□ 0.5
VAC14-210ENST00000568548 RPA3P35244 121 aaPredicted RBP18.16■□□□□ 0.5
VAC14-210ENST00000568548 MAGEA4P43358 317 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms