RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 XKR3Q5GH77 459 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 FYB2Q5VWT5 728 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 PTF1AQ7RTS3 328 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 GSTA5Q7RTV2 222 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 PIGWQ7Z7B1 504 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 AMIGO3Q86WK7 504 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 TDRPQ86YL5 185 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 APLFQ8IW19 511 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-250ENST00000568290 ZFPM1Q8IX07 1006 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 NIM1KQ8IY84 436 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 MCOLN2Q8IZK6 566 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 SPICE1Q8N0Z3 855 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 CYP2W1Q8TAV3 490 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 ATP8B4Q8TF62 1192 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 CCT6BQ92526 530 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 C18orf8Q96DM3 657 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 ARHGEF26Q96DR7 871 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 CEP170P1Q96L14 293 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 MAGEB18Q96M61 343 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 HINFPQ9BQA5 517 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 PRR14Q9BWN1 585 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 CELF4Q9BZC1 486 aaKnown RBP8.12□□□□□ -1.11
ATXN3-250ENST00000568290 PCIF1Q9H4Z3 704 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 AZI2Q9H6S1 392 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 SLC40A1Q9NP59 571 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 TMOD4Q9NZQ9 345 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 WDR35Q9P2L0 1181 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 LGALS13Q9UHV8 139 aa8.12□□□□□ -1.11
ATXN3-250ENST00000568290 DRG1Q9Y295 367 aaKnown RBP8.12□□□□□ -1.11
ATXN3-250ENST00000568290 MYPNQ86TC9 1320 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 C19orf81C9J6K1 198 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 E7ENQ6 273 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 SLC16A4O15374 487 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 CYP26A1O43174 497 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 HOXA2O43364 376 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 KIF1CO43896 1103 aaKnown RBP8.11□□□□□ -1.11
ATXN3-250ENST00000568290 SPAG6O75602 509 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 LUC7L3O95232 432 aaKnown RBP8.11□□□□□ -1.11
ATXN3-250ENST00000568290 LMNAP02545 664 aaKnown RBP8.11□□□□□ -1.11
ATXN3-250ENST00000568290 TNNI1P19237 187 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 PTPN7P35236 360 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 PIK3CAP42336 1068 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 RPL21P46778 160 aaKnown RBP8.11□□□□□ -1.11
ATXN3-250ENST00000568290 SCTRP47872 440 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 CACNB3P54284 484 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 USP46P62068 366 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 IRX3P78415 501 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-250ENST00000568290 FMO1Q01740 532 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 PPP3CAQ08209 521 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 ZNF211Q13398 564 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-250ENST00000568290 SPARCL1Q14515 664 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 ACAP1Q15027 740 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 KYAT1Q16773 422 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 KLHL38Q2WGJ6 581 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 TNFAIP8L3Q5GJ75 292 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 MORN1Q5T089 497 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 CYB5D1Q6P9G0 228 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 C4orf22Q6V702 233 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 CENPUQ71F23 418 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 CCDC25Q86WR0 208 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 PHF13Q86YI8 300 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-250ENST00000568290 TRIM42Q8IWZ5 723 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 DAW1Q8N136 415 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 TTLL6Q8N841 843 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 TMEM161BQ8NDZ6 487 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 OR2W6PQ8NHA6 318 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 DEPTORQ8TB45 409 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 ZNF398Q8TD17 642 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 SYTL5Q8TDW5 730 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-250ENST00000568290 ALG3Q92685 438 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 FAM167AQ96KS9 214 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 PRMT6Q96LA8 375 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-250ENST00000568290 ZNF317Q96PQ6 595 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-250ENST00000568290 RMDN3Q96TC7 470 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 IFT122Q9HBG6 1241 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 VEZTQ9HBM0 779 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 SLC38A10Q9HBR0 1119 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 SSU72Q9NP77 194 aaKnown RBP8.11□□□□□ -1.11
ATXN3-250ENST00000568290 KCNK9Q9NPC2 374 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 NRBP2Q9NSY0 501 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 GRHL1Q9NZI5 618 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 FBXO40Q9UH90 709 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 SLC24A2Q9UI40 661 aa8.11□□□□□ -1.11
ATXN3-250ENST00000568290 ADGRA3Q8IWK6 1321 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 FAM196BA6NMK8 535 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 DDX39AO00148 427 aaKnown RBP8.1□□□□□ -1.11
ATXN3-250ENST00000568290 DHX15O43143 795 aaKnown RBP8.1□□□□□ -1.11
ATXN3-250ENST00000568290 TOMM70O94826 608 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 SGPL1O95470 568 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 PIGRP01833 764 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 ATP5BP06576 529 aaKnown RBP8.1□□□□□ -1.11
ATXN3-250ENST00000568290 KRT7P08729 469 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 RARAP10276 462 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 PYGMP11217 842 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 ITGB5P18084 799 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 CCND1P24385 295 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 TMOD1P28289 359 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 COPB2P35606 906 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 GJA5P36382 358 aa8.1□□□□□ -1.11
ATXN3-250ENST00000568290 NAMPTP43490 491 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms