RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 POLIQ9UNA4 740 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 NUB1Q9Y5A7 615 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 CFAP54Q96N23 3096 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 A0A1W2PQ27 194 aa14.03□□□□□ -0.16
TSC2-220ENST00000568238 A0A1W2PQ64 194 aa14.03□□□□□ -0.16
TSC2-220ENST00000568238 A0A1W2PQD8 194 aa14.03□□□□□ -0.16
TSC2-220ENST00000568238 SYN3O14994 580 aa14.03□□□□□ -0.16
TSC2-220ENST00000568238 POLR2DO15514 142 aaKnown RBP14.03□□□□□ -0.16
TSC2-220ENST00000568238 CLTAP09496 248 aa14.03□□□□□ -0.16
TSC2-220ENST00000568238 LAMP2P13473 410 aa14.03□□□□□ -0.16
TSC2-220ENST00000568238 MRE11P49959 708 aa14.03□□□□□ -0.16
TSC2-220ENST00000568238 NUBP1P53384 320 aa14.03□□□□□ -0.16
TSC2-220ENST00000568238 SLC10A6Q3KNW5 377 aa14.03□□□□□ -0.16
TSC2-220ENST00000568238 ASTLQ6HA08 431 aaPredicted RBP14.03□□□□□ -0.16
TSC2-220ENST00000568238 RTL10Q7L3V2 364 aa14.03□□□□□ -0.16
TSC2-220ENST00000568238 RSAD2Q8WXG1 361 aa14.03□□□□□ -0.16
TSC2-220ENST00000568238 HAPLN2Q9GZV7 340 aa14.03□□□□□ -0.16
TSC2-220ENST00000568238 GOLPH3LQ9H4A5 285 aa14.03□□□□□ -0.16
TSC2-220ENST00000568238 ZHX3Q9H4I2 956 aa14.03□□□□□ -0.16
TSC2-220ENST00000568238 TUBGCP4Q9UGJ1 667 aa14.03□□□□□ -0.16
TSC2-220ENST00000568238 TBX20Q9UMR3 447 aa14.03□□□□□ -0.16
TSC2-220ENST00000568238 ZFP37Q9Y6Q3 630 aaPredicted RBP14.03□□□□□ -0.16
TSC2-220ENST00000568238 TSC2P49815 1807 aa14.02□□□□□ -0.16
TSC2-220ENST00000568238 NARSO43776 548 aaKnown RBP14.02□□□□□ -0.17
TSC2-220ENST00000568238 PIGRP01833 764 aa14.02□□□□□ -0.17
TSC2-220ENST00000568238 ABCD1P33897 745 aa14.02□□□□□ -0.17
TSC2-220ENST00000568238 MCM4P33991 863 aa14.02□□□□□ -0.17
TSC2-220ENST00000568238 NDUFA8P51970 172 aa14.02□□□□□ -0.17
TSC2-220ENST00000568238 NTHL1P78549 312 aa14.02□□□□□ -0.17
TSC2-220ENST00000568238 ROR1Q01973 937 aa14.02□□□□□ -0.17
TSC2-220ENST00000568238 PPP2R3AQ06190 1150 aa14.02□□□□□ -0.17
TSC2-220ENST00000568238 HTR4Q13639 388 aa14.02□□□□□ -0.17
TSC2-220ENST00000568238 E2F4Q16254 413 aa14.02□□□□□ -0.17
TSC2-220ENST00000568238 KYAT1Q16773 422 aa14.02□□□□□ -0.17
TSC2-220ENST00000568238 UVSSAQ2YD98 709 aa14.02□□□□□ -0.17
TSC2-220ENST00000568238 CWF19L1Q69YN2 538 aaKnown RBP14.02□□□□□ -0.17
TSC2-220ENST00000568238 SLC8B1Q6J4K2 584 aa14.02□□□□□ -0.17
TSC2-220ENST00000568238 SIX5Q8N196 739 aa14.02□□□□□ -0.17
TSC2-220ENST00000568238 TMEM105Q8N8V8 129 aa14.02□□□□□ -0.17
TSC2-220ENST00000568238 IQUBQ8NA54 791 aa14.02□□□□□ -0.17
TSC2-220ENST00000568238 KIF12Q96FN5 646 aa14.02□□□□□ -0.17
TSC2-220ENST00000568238 SUSD3Q96L08 255 aa14.02□□□□□ -0.17
TSC2-220ENST00000568238 PLEKHA5Q9HAU0 1116 aa14.02□□□□□ -0.17
TSC2-220ENST00000568238 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.02□□□□□ -0.17
TSC2-220ENST00000568238 ZFHX2Q9C0A1 2572 aaPredicted RBP14.02□□□□□ -0.17
TSC2-220ENST00000568238 TTC26A0AVF1 554 aa14.01□□□□□ -0.17
TSC2-220ENST00000568238 H7C4K7 107 aa14.01□□□□□ -0.17
TSC2-220ENST00000568238 GALR2O43603 387 aaPredicted RBP14.01□□□□□ -0.17
TSC2-220ENST00000568238 TRAK2O60296 914 aa14.01□□□□□ -0.17
TSC2-220ENST00000568238 GADD45BO75293 160 aaPredicted RBP14.01□□□□□ -0.17
TSC2-220ENST00000568238 SRFP11831 508 aa14.01□□□□□ -0.17
TSC2-220ENST00000568238 TNFSF9P41273 254 aa14.01□□□□□ -0.17
TSC2-220ENST00000568238 CLCN5P51795 746 aa14.01□□□□□ -0.17
TSC2-220ENST00000568238 ZNF280DQ6N043 979 aa14.01□□□□□ -0.17
TSC2-220ENST00000568238 SV2BQ7L1I2 683 aa14.01□□□□□ -0.17
TSC2-220ENST00000568238 APPL2Q8NEU8 664 aa14.01□□□□□ -0.17
TSC2-220ENST00000568238 FLCNQ8NFG4 579 aa14.01□□□□□ -0.17
TSC2-220ENST00000568238 IRF2BPLQ9H1B7 796 aa14.01□□□□□ -0.17
TSC2-220ENST00000568238 CDH7Q9ULB5 785 aa14.01□□□□□ -0.17
TSC2-220ENST00000568238 HPSEQ9Y251 543 aa14.01□□□□□ -0.17
TSC2-220ENST00000568238 NUMBLQ9Y6R0 609 aa14.01□□□□□ -0.17
TSC2-220ENST00000568238 FRYLO94915 3013 aa14□□□□□ -0.17
TSC2-220ENST00000568238 TCHHQ07283 1943 aa14□□□□□ -0.17
TSC2-220ENST00000568238 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14□□□□□ -0.17
TSC2-220ENST00000568238 WDR27A2RRH5 827 aa14□□□□□ -0.17
TSC2-220ENST00000568238 ANHXE9PGG2 379 aa14□□□□□ -0.17
TSC2-220ENST00000568238 PRRG1O14668 218 aa14□□□□□ -0.17
TSC2-220ENST00000568238 OGTO15294 1046 aa14□□□□□ -0.17
TSC2-220ENST00000568238 XPOTO43592 962 aaKnown RBP14□□□□□ -0.17
TSC2-220ENST00000568238 FAM189A1O60320 539 aa14□□□□□ -0.17
TSC2-220ENST00000568238 CFHP08603 1231 aa14□□□□□ -0.17
TSC2-220ENST00000568238 ELF1P32519 619 aa14□□□□□ -0.17
TSC2-220ENST00000568238 SYKP43405 635 aa14□□□□□ -0.17
TSC2-220ENST00000568238 SPAG1Q07617 926 aa14□□□□□ -0.17
TSC2-220ENST00000568238 ENOX2Q16206 610 aaKnown RBP14□□□□□ -0.17
TSC2-220ENST00000568238 PABPC1LQ4VXU2 614 aaKnown RBP14□□□□□ -0.17
TSC2-220ENST00000568238 ZBTB41Q5SVQ8 909 aa14□□□□□ -0.17
TSC2-220ENST00000568238 MAP4K3Q8IVH8 894 aa14□□□□□ -0.17
TSC2-220ENST00000568238 CEP57L1Q8IYX8 460 aa14□□□□□ -0.17
TSC2-220ENST00000568238 SLC44A3Q8N4M1 653 aa14□□□□□ -0.17
TSC2-220ENST00000568238 ZNF461Q8TAF7 563 aa14□□□□□ -0.17
TSC2-220ENST00000568238 DDX12PQ92771 950 aa14□□□□□ -0.17
TSC2-220ENST00000568238 FGF13Q92913 245 aa14□□□□□ -0.17
TSC2-220ENST00000568238 GBP4Q96PP9 640 aa14□□□□□ -0.17
TSC2-220ENST00000568238 FIZ1Q96SL8 496 aa14□□□□□ -0.17
TSC2-220ENST00000568238 PHOX2BQ99453 314 aa14□□□□□ -0.17
TSC2-220ENST00000568238 MSTO1Q9BUK6 570 aa14□□□□□ -0.17
TSC2-220ENST00000568238 RPF1Q9H9Y2 349 aaKnown RBP14□□□□□ -0.17
TSC2-220ENST00000568238 HCFC1R1Q9NWW0 138 aa14□□□□□ -0.17
TSC2-220ENST00000568238 WNT16Q9UBV4 365 aa14□□□□□ -0.17
TSC2-220ENST00000568238 UBQLN1Q9UMX0 589 aaKnown RBP14□□□□□ -0.17
TSC2-220ENST00000568238 PCDHB8Q9UN66 801 aa14□□□□□ -0.17
TSC2-220ENST00000568238 A0A0B4J269 797 aa13.99□□□□□ -0.17
TSC2-220ENST00000568238 FAM237AA0A1B0GTK4 181 aa13.99□□□□□ -0.17
TSC2-220ENST00000568238 ARHGEF37A1IGU5 675 aa13.99□□□□□ -0.17
TSC2-220ENST00000568238 MYMKA6NI61 221 aa13.99□□□□□ -0.17
TSC2-220ENST00000568238 LACTBL1A8MY62 500 aa13.99□□□□□ -0.17
TSC2-220ENST00000568238 ACTN4O43707 911 aaKnown RBP13.99□□□□□ -0.17
TSC2-220ENST00000568238 TBC1D4O60343 1298 aa13.99□□□□□ -0.17
TSC2-220ENST00000568238 PRPF40AO75400 957 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms