RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 ICAM3P32942 547 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 GSDMDP57764 484 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 PSMC5P62195 406 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 COASYQ13057 564 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 WDR78Q5VTH9 848 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 CDKAL1Q5VV42 579 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 CDCP2Q5VXM1 449 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 FBXW10Q5XX13 1052 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 ANKRD40Q6AI12 368 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 CENPPQ6IPU0 288 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 KCNV1Q6PIU1 500 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 SEPT14Q6ZU15 432 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 C1orf186Q6ZWK4 172 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 OTUD6AQ7L8S5 288 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 FAM114A1Q8IWE2 563 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 C4orf19Q8IY42 314 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 SMAP1Q8IYB5 467 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-218ENST00000568153 MYOCDQ8IZQ8 938 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 FAM181AQ8N9Y4 354 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 DNAJB8Q8NHS0 232 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 BAHD1Q8TBE0 780 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-218ENST00000568153 SMCR8Q8TEV9 937 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-218ENST00000568153 ZNF526Q8TF50 670 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-218ENST00000568153 TMEM40Q8WWA1 233 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 SEC16BQ96JE7 1060 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 ZNF830Q96NB3 372 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-218ENST00000568153 TSG101Q99816 390 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 ZHX3Q9H4I2 956 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 TXNRD2Q9NNW7 524 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 NMRK2Q9NPI5 230 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 LIMA1Q9UHB6 759 aaKnown RBP6.77□□□□□ -1.33
CAPN3-218ENST00000568153 NRBP1Q9UHY1 535 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 DBR1Q9UK59 544 aaKnown RBP6.77□□□□□ -1.33
CAPN3-218ENST00000568153 COL4A3BPQ9Y5P4 624 aa6.77□□□□□ -1.33
CAPN3-218ENST00000568153 NFASCO94856 1347 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 SYNRGQ9UMZ2 1314 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 MYH15Q9Y2K3 1946 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 LOC102724159A0A0B4J2E5 919 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 FRMD3A2A2Y4 597 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 ASB14A6NK59 587 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 KCNJ18B7U540 433 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 TBCAO75347 108 aaKnown RBP6.76□□□□□ -1.33
CAPN3-218ENST00000568153 MSNP26038 577 aaKnown RBP6.76□□□□□ -1.33
CAPN3-218ENST00000568153 EEF1GP26641 437 aaKnown RBP6.76□□□□□ -1.33
CAPN3-218ENST00000568153 ALDH5A1P51649 535 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-218ENST00000568153 GP2P55259 537 aaKnown RBP6.76□□□□□ -1.33
CAPN3-218ENST00000568153 HUNKP57058 714 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 INHBEP58166 350 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 LRRC63Q05C16 580 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 KCNJ12Q14500 433 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 NEDD9Q14511 834 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 PWP2Q15269 919 aaKnown RBP6.76□□□□□ -1.33
CAPN3-218ENST00000568153 LRRC41Q15345 812 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 HSP90AA4PQ58FG1 418 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 TCP11X2Q5H9J9 407 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 FAM26FQ5R3K3 315 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 SWSAP1Q6NVH7 229 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 TTI2Q6NXR4 508 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 MIS18BP1Q6P0N0 1132 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 FOXR2Q6PJQ5 311 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 NLRC3Q7RTR2 1065 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 TMC6Q7Z403 805 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 FILIP1Q7Z7B0 1213 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 VSTM4Q8IW00 320 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 PHACTR4Q8IZ21 702 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 MYCT1Q8N699 235 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 CSGALNACT2Q8N6G5 542 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 FAM133AQ8N9E0 248 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 BRI3BPQ8WY22 251 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 HPS3Q969F9 1004 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 LXNQ9BS40 222 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 PRDM5Q9NQX1 630 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-218ENST00000568153 ANKEF1Q9NU02 776 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 TBC1D7Q9P0N9 293 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 SLC9A2Q9UBY0 812 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 ZC3H7BQ9UGR2 993 aaKnown RBP6.76□□□□□ -1.33
CAPN3-218ENST00000568153 TPX2Q9ULW0 747 aaKnown RBP6.76□□□□□ -1.33
CAPN3-218ENST00000568153 PCDHA2Q9Y5H9 948 aa6.76□□□□□ -1.33
CAPN3-218ENST00000568153 OAS3Q9Y6K5 1087 aaKnown RBP6.76□□□□□ -1.33
CAPN3-218ENST00000568153 DNAJC25-GNG10A0A024R161 153 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 MANSC4A6NHS7 340 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-218ENST00000568153 N4BP3O15049 544 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 CCNE2O96020 404 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 PGK2P07205 417 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 IMPDH2P12268 514 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 NME1P15531 152 aaKnown RBP6.75□□□□□ -1.33
CAPN3-218ENST00000568153 RAG1P15918 1043 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 KCNA2P16389 499 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 PTGS1P23219 599 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 EDNRBP24530 442 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 GUCY2CP25092 1073 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 POLR2BP30876 1174 aaKnown RBP6.75□□□□□ -1.33
CAPN3-218ENST00000568153 YWHABP31946 246 aaKnown RBP6.75□□□□□ -1.33
CAPN3-218ENST00000568153 PMS1P54277 932 aaKnown RBP6.75□□□□□ -1.33
CAPN3-218ENST00000568153 OXCT1P55809 520 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 ACTR2P61160 394 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 FKBP3Q00688 224 aaKnown RBP6.75□□□□□ -1.33
CAPN3-218ENST00000568153 SP2Q02086 613 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 FSTL1Q12841 308 aa6.75□□□□□ -1.33
CAPN3-218ENST00000568153 KRT31Q15323 416 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms