RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 DEAF1O75398 565 aaPredicted RBP13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 FAM200BP0CF97 657 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 CALB2P22676 271 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 PON1P27169 355 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 COPAP53621 1224 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 ITGB3BPQ13352 177 aaPredicted RBP13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 CENPPQ6IPU0 288 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 MIS18BP1Q6P0N0 1132 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 C4orf50Q6ZRC1 276 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 BFARQ9NZS9 450 aa13.04□□□□□ -0.32
CSPG4P13-202ENST00000567704 PIK3R2O00459 728 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 FASTKD1Q53R41 847 aaKnown RBP13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 WASHC2DQ5SRD0 308 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 RSPH3Q86UC2 560 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 CYGBQ8WWM9 190 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 IL1RAPL1Q9NZN1 696 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 OVOS2A0A0G2JMS6 1433 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 ALDH1B1P30837 517 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 ABCD1P33897 745 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 CACNB3P54284 484 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 MIGA2Q7L4E1 593 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 RNF135Q8IUD6 432 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 SCG3Q8WXD2 468 aaKnown RBP13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 CELF1Q92879 486 aaKnown RBP13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 NEURL4Q96JN8 1562 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 A0A087X0B3 334 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 E2F8A0AVK6 867 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 TRIM49D1C9J1S8 452 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 KCNN4O15554 427 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 CBX6O95503 412 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 TBXAS1P24557 533 aaPredicted RBP13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 FLOT2Q14254 428 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 ZNF699Q32M78 642 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 DDHD1Q8NEL9 900 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 PAGR1Q9BTK6 254 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 GCOM2Q9BZD3 368 aaPredicted RBP13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 NAALADL1Q9UQQ1 740 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 MYO3BQ8WXR4 1341 aa13.03□□□□□ -0.32
CSPG4P13-202ENST00000567704 TMCC1O94876 653 aa13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 APOA1P02647 267 aa13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 SDC4P31431 198 aa13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 SLC34A1Q06495 639 aa13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 FAM84BQ96KN1 310 aaPredicted RBP13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 HSPBP1Q9NZL4 362 aa13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 ABCB11O95342 1321 aa13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 DLC1Q96QB1 1528 aa13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 PSAPP07602 524 aa13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 PTENP60484 403 aa13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 RPS6P62753 249 aaKnown RBP13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 R3HDM1Q15032 1099 aaKnown RBP13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 NKX1-1Q15270 411 aaPredicted RBP13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 SURF1Q15526 300 aa13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 FAM102AQ5T9C2 384 aaPredicted RBP13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 ARHGAP27Q6ZUM4 889 aa13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 ATP8B4Q8TF62 1192 aa13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 DHX38Q92620 1227 aaKnown RBP13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 SENP7Q9BQF6 1050 aa13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 UNC45AQ9H3U1 944 aa13.02□□□□□ -0.32
CSPG4P13-202ENST00000567704 H0YIN7 160 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 FOXN3O00409 490 aaPredicted RBP13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 RIPK2O43353 540 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 ESRRBO95718 433 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 GH2P01242 217 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 P4HBP07237 508 aaKnown RBP13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 QARSP47897 775 aaKnown RBP13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 ACTR2P61160 394 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 TRIM28Q13263 835 aaKnown RBP13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 GRB10Q13322 594 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 MAPRE2Q15555 327 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 IRGCQ6NXR0 463 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 C16orf89Q6UX73 402 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 CRELD2Q6UXH1 353 aaPredicted RBP13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 DCAF4Q8WV16 495 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 ATXN2LQ8WWM7 1075 aaKnown RBP13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 MPP4Q96JB8 637 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 DACH2Q96NX9 599 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 RPS6KC1Q96S38 1066 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 RPF1Q9H9Y2 349 aaKnown RBP13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 DDX18Q9NVP1 670 aaKnown RBP13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 KRT75O95678 551 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 KRT8P05787 483 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 CENPCQ03188 943 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 BRINP3Q76B58 766 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 IFNEQ86WN2 208 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 SLC25A41Q8N5S1 370 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 MRPL1Q9BYD6 325 aaKnown RBP13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 AIPL1Q9NZN9 384 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 ATP11BQ9Y2G3 1177 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 TMEM131LA2VDJ0 1609 aa13.02□□□□□ -0.33
CSPG4P13-202ENST00000567704 KCNA4P22459 653 aa13.01□□□□□ -0.33
CSPG4P13-202ENST00000567704 ARHGDIAP52565 204 aa13.01□□□□□ -0.33
CSPG4P13-202ENST00000567704 MTMR1Q13613 665 aa13.01□□□□□ -0.33
CSPG4P13-202ENST00000567704 RASA2Q15283 850 aa13.01□□□□□ -0.33
CSPG4P13-202ENST00000567704 MEA1Q16626 185 aa13.01□□□□□ -0.33
CSPG4P13-202ENST00000567704 MROH9Q5TGP6 573 aa13.01□□□□□ -0.33
CSPG4P13-202ENST00000567704 CDR2LQ86X02 465 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P13-202ENST00000567704 MCPH1Q8NEM0 835 aa13.01□□□□□ -0.33
CSPG4P13-202ENST00000567704 NSUN4Q96CB9 384 aaKnown RBP13.01□□□□□ -0.33
CSPG4P13-202ENST00000567704 GID8Q9NWU2 228 aa13.01□□□□□ -0.33
CSPG4P13-202ENST00000567704 CNOT7Q9UIV1 285 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms