RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	PPP2R3A	Q06190	1150 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	SPAG1	Q07617	926 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	TDG	Q13569	410 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	MRPL58	Q14197	206 aa	Known RBP	7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	ENOX2	Q16206	610 aa	Known RBP	7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	VARS2	Q5ST30	1063 aa	Known RBP	7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	ZBTB41	Q5SVQ8	909 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	AXDND1	Q5T1B0	1012 aa	Predicted RBP	7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	ATL3	Q6DD88	541 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	ADAL	Q6DHV7	355 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	SLC8B1	Q6J4K2	584 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	RSPO2	Q6UXX9	243 aa	Predicted RBP	7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	MAP4K3	Q8IVH8	894 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	FBXL6	Q8N531	539 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	SPRYD3	Q8NCJ5	442 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	APPL2	Q8NEU8	664 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	BEST2	Q8NFU1	509 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	ZNF461	Q8TAF7	563 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	NXPE3	Q969Y0	559 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	FAM122A	Q96E09	287 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	ACCS	Q96QU6	501 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	STRA6	Q9BX79	667 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	KCNH6	Q9H252	994 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	KCNK12	Q9HB15	430 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	PANK4	Q9NVE7	773 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	TBC1D7	Q9P0N9	293 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	IGSF9	Q9P2J2	1179 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	EPS15L1	Q9UBC2	864 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	CPSF3	Q9UKF6	684 aa	Known RBP	7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	AGO2	Q9UKV8	859 aa	Known RBP	7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	UBQLN1	Q9UMX0	589 aa	Known RBP	7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	PCDHB8	Q9UN66	801 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	EXOC7	Q9UPT5	735 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	DERA	Q9Y315	318 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	PCDHB13	Q9Y5F0	798 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	CACNA1I	Q9P0X4	2223 aa		7.52	□□□□□ -1.21
SF3B3-209	ENST00000567635	KMT2E	Q8IZD2	1858 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	F5	P12259	2224 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	DENND4C	Q5VZ89	1909 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635		M0QZQ0	153 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	PRRG1	O14668	218 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	CCL16	O15467	120 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	TBC1D4	O60343	1298 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	N4BP1	O75113	896 aa	Known RBP	7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	F13A1	P00488	732 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	C8A	P07357	584 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	LAMP2	P13473	410 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	PAX3	P23760	479 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	ELF1	P32519	619 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	PLA2G5	P39877	138 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	ARPP19	P56211	112 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	AMPD3	Q01432	767 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	POU5F1	Q01860	360 aa	Known RBP	7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	ALCAM	Q13740	583 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	CTXN3	Q4LDR2	81 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	L1TD1	Q5T7N2	865 aa	Known RBP	7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	SPATA1	Q5VX52	437 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	TPGS2	Q68CL5	300 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	JADE1	Q6IE81	842 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	FOXD4L3	Q6VB84	417 aa	Predicted RBP	7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	GRASP	Q7Z6J2	395 aa	Predicted RBP	7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	SUGP1	Q8IWZ8	645 aa	Known RBP	7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	CCDC65	Q8IXS2	484 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	SYCP3	Q8IZU3	236 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	SLC44A3	Q8N4M1	653 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	IQUB	Q8NA54	791 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	SLC7A14	Q8TBB6	771 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	UBE2Q2	Q8WVN8	375 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	POMGNT1	Q8WZA1	660 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	MYADM	Q96S97	322 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	OXCT2	Q9BYC2	517 aa	Predicted RBP	7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	CUEDC2	Q9H467	287 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	ASB7	Q9H672	318 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	OLFML3	Q9NRN5	406 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	TUBGCP4	Q9UGJ1	667 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	FBXL5	Q9UKA1	691 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	CFAP45	Q9UL16	551 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	MAFF	Q9ULX9	164 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	POLI	Q9UNA4	740 aa		7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	PTPRZ1	P23471	2315 aa	Predicted RBP	7.51	□□□□□ -1.21
SF3B3-209	ENST00000567635	ARHGEF37	A1IGU5	675 aa		7.5	□□□□□ -1.21
SF3B3-209	ENST00000567635	FRMD3	A2A2Y4	597 aa		7.5	□□□□□ -1.21
SF3B3-209	ENST00000567635	TISP43	B9A030	160 aa		7.5	□□□□□ -1.21
SF3B3-209	ENST00000567635	ANHX	E9PGG2	379 aa		7.5	□□□□□ -1.21
SF3B3-209	ENST00000567635	PPP1R37	O75864	691 aa		7.5	□□□□□ -1.21
SF3B3-209	ENST00000567635	OAZ2	O95190	189 aa		7.5	□□□□□ -1.21
SF3B3-209	ENST00000567635	IL18RAP	O95256	599 aa		7.5	□□□□□ -1.21
SF3B3-209	ENST00000567635	GCNT3	O95395	438 aa		7.5	□□□□□ -1.21
SF3B3-209	ENST00000567635	LDHA	P00338	332 aa	Known RBP	7.5	□□□□□ -1.21
SF3B3-209	ENST00000567635	POU2F2	P09086	479 aa		7.5	□□□□□ -1.21
SF3B3-209	ENST00000567635	ATF2	P15336	505 aa		7.5	□□□□□ -1.21
SF3B3-209	ENST00000567635	CD44	P16070	742 aa	Known RBP	7.5	□□□□□ -1.21
SF3B3-209	ENST00000567635	PTPN2	P17706	415 aa		7.5	□□□□□ -1.21
SF3B3-209	ENST00000567635	AVPR2	P30518	371 aa		7.5	□□□□□ -1.21
SF3B3-209	ENST00000567635	ADSS	P30520	456 aa		7.5	□□□□□ -1.21
SF3B3-209	ENST00000567635	ME1	P48163	572 aa		7.5	□□□□□ -1.21
SF3B3-209	ENST00000567635	GUCY2F	P51841	1108 aa		7.5	□□□□□ -1.21
SF3B3-209	ENST00000567635	LILRA4	P59901	499 aa		7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms