RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 CD44P16070 742 aaKnown RBP16.37■□□□□ 0.21
COMMD4-219ENST00000567399 PAX3P23760 479 aa16.37■□□□□ 0.21
COMMD4-219ENST00000567399 POLR2BP30876 1174 aaKnown RBP16.37■□□□□ 0.21
COMMD4-219ENST00000567399 CASP4P49662 377 aa16.37■□□□□ 0.21
COMMD4-219ENST00000567399 TAF6P49848 677 aa16.37■□□□□ 0.21
COMMD4-219ENST00000567399 WNT7BP56706 349 aa16.37■□□□□ 0.21
COMMD4-219ENST00000567399 RBP5P82980 135 aa16.37■□□□□ 0.21
COMMD4-219ENST00000567399 FKBP3Q00688 224 aaKnown RBP16.37■□□□□ 0.21
COMMD4-219ENST00000567399 DSG1Q02413 1049 aa16.37■□□□□ 0.21
COMMD4-219ENST00000567399 CREMQ03060 361 aa16.37■□□□□ 0.21
COMMD4-219ENST00000567399 HYAL1Q12794 435 aa16.37■□□□□ 0.21
COMMD4-219ENST00000567399 PTPN14Q15678 1187 aa16.37■□□□□ 0.21
COMMD4-219ENST00000567399 LLGL2Q6P1M3 1020 aa16.37■□□□□ 0.21
COMMD4-219ENST00000567399 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.37■□□□□ 0.21
COMMD4-219ENST00000567399 TMEM130Q8N3G9 435 aa16.37■□□□□ 0.21
COMMD4-219ENST00000567399 APPL2Q8NEU8 664 aa16.37■□□□□ 0.21
COMMD4-219ENST00000567399 HLA-CQ95604 372 aa16.37■□□□□ 0.21
COMMD4-219ENST00000567399 EEF2KMTQ96G04 330 aa16.37■□□□□ 0.21
COMMD4-219ENST00000567399 ZNF560Q96MR9 790 aa16.37■□□□□ 0.21
COMMD4-219ENST00000567399 POP1Q99575 1024 aaKnown RBP16.37■□□□□ 0.21
COMMD4-219ENST00000567399 CGRRF1Q99675 332 aa16.37■□□□□ 0.21
COMMD4-219ENST00000567399 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.37■□□□□ 0.21
COMMD4-219ENST00000567399 CHST7Q9NS84 486 aa16.37■□□□□ 0.21
COMMD4-219ENST00000567399 DACH1Q9UI36 760 aa16.37■□□□□ 0.21
COMMD4-219ENST00000567399 ITGA11Q9UKX5 1188 aa16.37■□□□□ 0.21
COMMD4-219ENST00000567399 TRIM49BA6NDI0 452 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 PPP1R3GB7ZBB8 358 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 PIRO00625 290 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 IGFBP6P24592 240 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-219ENST00000567399 TKTP29401 623 aaKnown RBP16.36■□□□□ 0.21
COMMD4-219ENST00000567399 GTF2F1P35269 517 aaKnown RBP eCLIP16.36■□□□□ 0.214e-9■■■■■ 28.7
COMMD4-219ENST00000567399 PNPLA4P41247 253 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 NDUFV1P49821 464 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 STX17P56962 302 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 MYO1EQ12965 1108 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 PAK1Q13153 545 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 BIRC3Q13489 604 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 TRPC3Q13507 836 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 PSMD5Q16401 504 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 DUSP6Q16828 381 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 SV2CQ496J9 727 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 KIAA0319Q5VV43 1072 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 SASS6Q6UVJ0 657 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 PRSS55Q6UWB4 352 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-219ENST00000567399 INTS8Q75QN2 995 aaKnown RBP16.36■□□□□ 0.21
COMMD4-219ENST00000567399 PPFIBP1Q86W92 1011 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 GLYCTKQ8IVS8 523 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 MLKLQ8NB16 471 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 TMEM174Q8WUU8 243 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 SYAP1Q96A49 352 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-219ENST00000567399 SUSD3Q96L08 255 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 KLHL5Q96PQ7 755 aa16.36■□□□□ 0.21
COMMD4-219ENST00000567399 ANO9A1A5B4 782 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 H7C4K7 107 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 PPEF2O14830 753 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 SYN3O14994 580 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 MAPK13O15264 365 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 CLASP2O75122 1294 aaKnown RBP16.35■□□□□ 0.21
COMMD4-219ENST00000567399 FGFR1OPO95684 399 aaKnown RBP16.35■□□□□ 0.21
COMMD4-219ENST00000567399 ADH1AP07327 375 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 CNPP09543 421 aaKnown RBP16.35■□□□□ 0.21
COMMD4-219ENST00000567399 BMP6P22004 513 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 VAMP7P51809 220 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 AP3M2P53677 418 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 LILRA4P59901 499 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 BFSP1Q12934 665 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 TPD52L1Q16890 204 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-219ENST00000567399 ZCWPW2Q504Y3 356 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 RTP2Q5QGT7 225 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 CCDC183Q5T5S1 534 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 ANKS3Q6ZW76 656 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 METTL23Q86XA0 190 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 RNF168Q8IYW5 571 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-219ENST00000567399 EFHBQ8N7U6 833 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 C1orf127Q8N9H9 656 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 OR5B17Q8NGF7 314 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 PARD3BQ8TEW8 1205 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 MMRN2Q9H8L6 949 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 PCDHB8Q9UN66 801 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 COG5Q9UP83 839 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 IRAK3Q9Y616 596 aa16.35■□□□□ 0.21
COMMD4-219ENST00000567399 LAMA2P24043 3122 aaKnown RBP16.34■□□□□ 0.21
COMMD4-219ENST00000567399 KPNA7A9QM74 516 aa16.34■□□□□ 0.21
COMMD4-219ENST00000567399 CYB561D2O14569 222 aa16.34■□□□□ 0.21
COMMD4-219ENST00000567399 AKAP3O75969 853 aa16.34■□□□□ 0.21
COMMD4-219ENST00000567399 ODC1P11926 461 aa16.34■□□□□ 0.21
COMMD4-219ENST00000567399 FGFR3P22607 806 aa16.34■□□□□ 0.21
COMMD4-219ENST00000567399 PMS1P54277 932 aaKnown RBP16.34■□□□□ 0.21
COMMD4-219ENST00000567399 NLRP12P59046 1061 aa16.34■□□□□ 0.21
COMMD4-219ENST00000567399 CCDC40Q4G0X9 1142 aa16.34■□□□□ 0.21
COMMD4-219ENST00000567399 ELMSAN1Q6PJG2 1045 aa16.34■□□□□ 0.21
COMMD4-219ENST00000567399 CD300LGQ6UXG3 332 aa16.34■□□□□ 0.21
COMMD4-219ENST00000567399 TRAPPC11Q7Z392 1133 aa16.34■□□□□ 0.21
COMMD4-219ENST00000567399 PALB2Q86YC2 1186 aa16.34■□□□□ 0.21
COMMD4-219ENST00000567399 CREBRFQ8IUR6 639 aa16.34■□□□□ 0.21
COMMD4-219ENST00000567399 TMC2Q8TDI7 906 aa16.34■□□□□ 0.21
COMMD4-219ENST00000567399 PIK3R5Q8WYR1 880 aa16.34■□□□□ 0.21
COMMD4-219ENST00000567399 PABPC5Q96DU9 382 aaKnown RBP16.34■□□□□ 0.21
COMMD4-219ENST00000567399 FAM84AQ96KN4 292 aa16.34■□□□□ 0.21
COMMD4-219ENST00000567399 SENP8Q96LD8 212 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms