RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 FCER1AP12319 257 aa4.52□□□□□ -1.69
CDH1-211ENST00000567320 GPD1P21695 349 aa4.52□□□□□ -1.69
CDH1-211ENST00000567320 EXOSC10Q01780 885 aaKnown RBP4.52□□□□□ -1.69
CDH1-211ENST00000567320 NHLH1Q02575 133 aa4.52□□□□□ -1.69
CDH1-211ENST00000567320 MTM1Q13496 603 aa4.52□□□□□ -1.69
CDH1-211ENST00000567320 TSTD2Q5T7W7 516 aa4.52□□□□□ -1.69
CDH1-211ENST00000567320 NOP9Q86U38 636 aaKnown RBP4.52□□□□□ -1.69
CDH1-211ENST00000567320 ZGPATQ8N5A5 531 aaKnown RBP4.52□□□□□ -1.69
CDH1-211ENST00000567320 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.52□□□□□ -1.69
CDH1-211ENST00000567320 TFAP2BQ92481 460 aa4.52□□□□□ -1.69
CDH1-211ENST00000567320 UROC1Q96N76 676 aa4.52□□□□□ -1.69
CDH1-211ENST00000567320 C11orf54Q9H0W9 315 aaPredicted RBP4.52□□□□□ -1.69
CDH1-211ENST00000567320 INO80B-WBP1J3KQ70 363 aa4.51□□□□□ -1.69
CDH1-211ENST00000567320 C1QL1O75973 258 aa4.51□□□□□ -1.69
CDH1-211ENST00000567320 AMY1AP04745 511 aa4.51□□□□□ -1.69
CDH1-211ENST00000567320 TSHZ1Q6ZSZ6 1077 aa4.51□□□□□ -1.69
CDH1-211ENST00000567320 CLNKQ7Z7G1 428 aa4.51□□□□□ -1.69
CDH1-211ENST00000567320 SRRM1Q8IYB3 904 aaKnown RBP4.51□□□□□ -1.69
CDH1-211ENST00000567320 OR2I1PQ8NGU4 316 aa4.51□□□□□ -1.69
CDH1-211ENST00000567320 WDR66Q8TBY9 1149 aa4.51□□□□□ -1.69
CDH1-211ENST00000567320 SMG7Q92540 1137 aaKnown RBP4.51□□□□□ -1.69
CDH1-211ENST00000567320 RAB24Q969Q5 203 aa4.51□□□□□ -1.69
CDH1-211ENST00000567320 INO80BQ9C086 356 aaPredicted RBP4.51□□□□□ -1.69
CDH1-211ENST00000567320 INTS13Q9NVM9 706 aa4.51□□□□□ -1.69
CDH1-211ENST00000567320 SAP30BPQ9UHR5 308 aaKnown RBP4.51□□□□□ -1.69
CDH1-211ENST00000567320 GPR45Q9Y5Y3 372 aa4.51□□□□□ -1.69
CDH1-211ENST00000567320 CCDC151A5D8V7 595 aa4.5□□□□□ -1.69
CDH1-211ENST00000567320 PROP1O75360 226 aa4.5□□□□□ -1.69
CDH1-211ENST00000567320 PRKD3O94806 890 aa4.5□□□□□ -1.69
CDH1-211ENST00000567320 HAUS5O94927 633 aa4.5□□□□□ -1.69
CDH1-211ENST00000567320 AGFG2O95081 481 aa4.5□□□□□ -1.69
CDH1-211ENST00000567320 CHRM2P08172 466 aa4.5□□□□□ -1.69
CDH1-211ENST00000567320 SLFN5Q08AF3 891 aa4.5□□□□□ -1.69
CDH1-211ENST00000567320 ZNF844Q08AG5 666 aa4.5□□□□□ -1.69
CDH1-211ENST00000567320 CD300EQ496F6 205 aaPredicted RBP4.5□□□□□ -1.69
CDH1-211ENST00000567320 UTP14CQ5TAP6 766 aaKnown RBP4.5□□□□□ -1.69
CDH1-211ENST00000567320 PAPD7Q5XG87 772 aaKnown RBP4.5□□□□□ -1.69
CDH1-211ENST00000567320 PEG10Q86TG7 708 aaKnown RBP4.5□□□□□ -1.69
CDH1-211ENST00000567320 ATL2Q8NHH9 583 aa4.5□□□□□ -1.69
CDH1-211ENST00000567320 SLC30A5Q8TAD4 765 aa4.5□□□□□ -1.69
CDH1-211ENST00000567320 COG1Q8WTW3 980 aa4.5□□□□□ -1.69
CDH1-211ENST00000567320 NRG4Q8WWG1 115 aa4.5□□□□□ -1.69
CDH1-211ENST00000567320 TMX3Q96JJ7 454 aa4.5□□□□□ -1.69
CDH1-211ENST00000567320 TLR10Q9BXR5 811 aa4.5□□□□□ -1.69
CDH1-211ENST00000567320 TDP1Q9NUW8 608 aa4.5□□□□□ -1.69
CDH1-211ENST00000567320 ST3GAL5Q9UNP4 418 aa4.5□□□□□ -1.69
CDH1-211ENST00000567320 TBX22Q9Y458 520 aa4.5□□□□□ -1.69
CDH1-211ENST00000567320 DNAJC9-AS1A6NH13 148 aa4.49□□□□□ -1.69
CDH1-211ENST00000567320 TOR1BO14657 336 aa4.49□□□□□ -1.69
CDH1-211ENST00000567320 MTNR1BP49286 362 aa4.49□□□□□ -1.69
CDH1-211ENST00000567320 MAPK10P53779 464 aa4.49□□□□□ -1.69
CDH1-211ENST00000567320 RPS7P62081 194 aaKnown RBP4.49□□□□□ -1.69
CDH1-211ENST00000567320 FOXF2Q12947 444 aa4.49□□□□□ -1.69
CDH1-211ENST00000567320 FAM153CQ494X1 144 aa4.49□□□□□ -1.69
CDH1-211ENST00000567320 VWA1Q6PCB0 445 aa4.49□□□□□ -1.69
CDH1-211ENST00000567320 ZNF788Q6ZQV5 615 aa4.49□□□□□ -1.69
CDH1-211ENST00000567320 LHFPL2Q6ZUX7 228 aa4.49□□□□□ -1.69
CDH1-211ENST00000567320 MIGA2Q7L4E1 593 aa4.49□□□□□ -1.69
CDH1-211ENST00000567320 AMIGO2Q86SJ2 522 aa4.49□□□□□ -1.69
CDH1-211ENST00000567320 AFAP1L2Q8N4X5 818 aa4.49□□□□□ -1.69
CDH1-211ENST00000567320 NSUN7Q8NE18 718 aaKnown RBP4.49□□□□□ -1.69
CDH1-211ENST00000567320 PACSIN1Q9BY11 444 aa4.49□□□□□ -1.69
CDH1-211ENST00000567320 ARPP21Q9UBL0 812 aaPredicted RBP4.49□□□□□ -1.69
CDH1-211ENST00000567320 NR2E3Q9Y5X4 410 aa4.49□□□□□ -1.69
CDH1-211ENST00000567320 PRAMEF33A0A0G2JMD5 474 aa4.48□□□□□ -1.69
CDH1-211ENST00000567320 MANSC4A6NHS7 340 aaPredicted RBP4.48□□□□□ -1.69
CDH1-211ENST00000567320 GRM6O15303 877 aa4.48□□□□□ -1.69
CDH1-211ENST00000567320 MPPED1O15442 326 aa4.48□□□□□ -1.69
CDH1-211ENST00000567320 PRAMEF10O60809 474 aa4.48□□□□□ -1.69
CDH1-211ENST00000567320 CLSTN1O94985 981 aa4.48□□□□□ -1.69
CDH1-211ENST00000567320 SRGNP10124 158 aa4.48□□□□□ -1.69
CDH1-211ENST00000567320 MTHFD1P11586 935 aaKnown RBP4.48□□□□□ -1.69
CDH1-211ENST00000567320 KCNA2P16389 499 aa4.48□□□□□ -1.69
CDH1-211ENST00000567320 GRIA3P42263 894 aa4.48□□□□□ -1.69
CDH1-211ENST00000567320 MASP1P48740 699 aa4.48□□□□□ -1.69
CDH1-211ENST00000567320 KRTAP10-11P60412 298 aa4.48□□□□□ -1.69
CDH1-211ENST00000567320 CTXN1P60606 82 aa4.48□□□□□ -1.69
CDH1-211ENST00000567320 ACAP2Q15057 778 aa4.48□□□□□ -1.69
CDH1-211ENST00000567320 DACT2Q5SW24 774 aa4.48□□□□□ -1.69
CDH1-211ENST00000567320 SPATS2Q86XZ4 545 aaKnown RBP4.48□□□□□ -1.69
CDH1-211ENST00000567320 B3GALNT2Q8NCR0 500 aa4.48□□□□□ -1.69
CDH1-211ENST00000567320 DDB2Q92466 427 aa4.48□□□□□ -1.69
CDH1-211ENST00000567320 LPIN2Q92539 896 aa4.48□□□□□ -1.69
CDH1-211ENST00000567320 IMPG2Q9BZV3 1241 aa4.48□□□□□ -1.69
CDH1-211ENST00000567320 KMT5AQ9NQR1 393 aa4.48□□□□□ -1.69
CDH1-211ENST00000567320 PCDHA13Q9Y5I0 950 aa4.48□□□□□ -1.69
CDH1-211ENST00000567320 ARHGEF17Q96PE2 2063 aaPredicted RBP4.47□□□□□ -1.69
CDH1-211ENST00000567320 A0A1W2PS29 197 aa4.47□□□□□ -1.69
CDH1-211ENST00000567320 TLDC2A0PJX2 215 aa4.47□□□□□ -1.69
CDH1-211ENST00000567320 GPR39O43194 453 aa4.47□□□□□ -1.69
CDH1-211ENST00000567320 AGXTP21549 392 aa4.47□□□□□ -1.69
CDH1-211ENST00000567320 GATA3P23771 443 aa4.47□□□□□ -1.69
CDH1-211ENST00000567320 ZNF81P51508 661 aa4.47□□□□□ -1.69
CDH1-211ENST00000567320 ATP8B2P98198 1209 aa4.47□□□□□ -1.69
CDH1-211ENST00000567320 SRSF7Q16629 238 aaKnown RBP eCLIP4.47□□□□□ -1.69
CDH1-211ENST00000567320 NBPF8Q3BBV2 869 aa4.47□□□□□ -1.69
CDH1-211ENST00000567320 SH2D3CQ8N5H7 860 aa4.47□□□□□ -1.69
CDH1-211ENST00000567320 AOPEPQ8N6M6 819 aa4.47□□□□□ -1.69
CDH1-211ENST00000567320 Q8NA96 180 aa4.47□□□□□ -1.69
CDH1-211ENST00000567320 SNX19Q92543 992 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms