RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 ADGRA3Q8IWK6 1321 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 DYNC1LI2O43237 492 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 GAP43P17677 238 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 SOX10P56693 466 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 GUCY1A3Q02108 690 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 COL9A3Q14050 684 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 PFKFB3Q16875 520 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 BEND6Q5SZJ8 279 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 TMCO4Q5TGY1 634 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 DACT3Q96B18 629 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 CPB2Q96IY4 423 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 ZBED2Q9BTP6 218 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 NRBP1Q9UHY1 535 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 LZTS1Q9Y250 596 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 CCDC88AQ3V6T2 1871 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 ENTPD3O75355 529 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 LSP1P33241 339 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 LIFRP42702 1097 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 STXBP2Q15833 593 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 LUZP2Q86TE4 346 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 MGARPQ8TDB4 240 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 ELMO3Q96BJ8 720 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 SLITRK6Q9H5Y7 841 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 ZNF302Q9NR11 478 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 PKD2L2Q9NZM6 624 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 PCDH10Q9P2E7 1040 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 RWDD2AQ9UIY3 292 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 SAC3D1A6NKF1 404 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 SNTNA6NMZ2 147 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 ZBBXA8MT70 800 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 PODXLO00592 558 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 CAPN9O14815 690 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 IRF6O14896 467 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 PGM3O95394 542 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 XIAPP98170 497 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 DEFB115Q30KQ5 88 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 PPP6R3Q5H9R7 873 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 B3GNT6Q6ZMB0 384 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 GALNT15Q8N3T1 639 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 LRRC39Q96DD0 335 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 B3GALT6Q96L58 329 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 NFIBO00712 420 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 AXIN1O15169 862 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 S100A5P33763 92 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 SCTRP47872 440 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 CARSP49589 748 aaKnown RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 ADKP55263 362 aaKnown RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 EIF2B5Q13144 721 aaKnown RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 GPATCH4Q5T3I0 446 aaKnown RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 PLA2G4FQ68DD2 849 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 CENPSQ8N2Z9 138 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 DPF3Q92784 378 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 P2RX7Q99572 595 aaKnown RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 RANBP17Q9H2T7 1088 aaKnown RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 ACAD9Q9H845 621 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 RNF19AQ9NV58 838 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 AGTPBP1Q9UPW5 1226 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 FAM187AA6NFU0 413 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 HNRNPRO43390 633 aaKnown RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 CNOT3O75175 753 aaKnown RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 AARSP49588 968 aaKnown RBP eCLIP6.3□□□□□ -1.44e-11■■□□□ 13.1
CNOT1-211ENST00000567188 BEX3Q00994 111 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 RBM20Q5T481 1227 aaKnown RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 RBBP8NLQ8NC74 664 aaPredicted RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 DGCR14Q96DF8 476 aaKnown RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 SRPK1Q96SB4 655 aaKnown RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 DCDC2Q9UHG0 476 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 HERC5Q9UII4 1024 aaKnown RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 LRFN2Q9ULH4 789 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 WBP11Q9Y2W2 641 aaKnown RBP6.3□□□□□ -1.4
CNOT1-211ENST00000567188 TIAM2Q8IVF5 1701 aa6.3□□□□□ -1.4
CNOT1-211ENST00000567188 GNB5O14775 395 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 FOSL1P15407 271 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 ELNP15502 786 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 COPB2P35606 906 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 C15orf59Q2T9L4 293 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-211ENST00000567188 LONP2Q86WA8 852 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 PM20D2Q8IYS1 436 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 MMGT1Q8N4V1 131 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 ZBTB8BQ8NAP8 495 aaPredicted RBP6.29□□□□□ -1.4
CNOT1-211ENST00000567188 DEPTORQ8TB45 409 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 SEPT1Q8WYJ6 367 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 JADE3Q92613 823 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 RBM41Q96IZ5 413 aaKnown RBP6.29□□□□□ -1.4
CNOT1-211ENST00000567188 NDNQ99608 321 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 DESI2Q9BSY9 194 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 INPP5FQ9Y2H2 1132 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 FKBP6O75344 327 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 PSMC6P62333 389 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 DNAJC3Q13217 504 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 PRR23CQ6ZRP0 262 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 PARD3BQ8TEW8 1205 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 SH3TC2Q8TF17 1288 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 GINS4Q9BRT9 223 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 CNPY3Q9BT09 278 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 VPS16Q9H269 839 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.29□□□□□ -1.4
CNOT1-211ENST00000567188 GABBR1Q9UBS5 961 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 CNTNAP1P78357 1384 aa6.29□□□□□ -1.4
CNOT1-211ENST00000567188 H0Y3Z8 333 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms