RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 NCANO14594 1321 aa12.38□□□□□ -0.43
SPG7-216ENST00000567138 ARHGEF37A1IGU5 675 aa12.37□□□□□ -0.43
SPG7-216ENST00000567138 MAN2B1O00754 1011 aa12.37□□□□□ -0.43
SPG7-216ENST00000567138 RETP07949 1114 aa12.37□□□□□ -0.43
SPG7-216ENST00000567138 ATP2B1P20020 1258 aa12.37□□□□□ -0.43
SPG7-216ENST00000567138 GDI1P31150 447 aa12.37□□□□□ -0.43
SPG7-216ENST00000567138 ELF1P32519 619 aa12.37□□□□□ -0.43
SPG7-216ENST00000567138 CCR3P51677 355 aa12.37□□□□□ -0.43
SPG7-216ENST00000567138 PPP2R5DQ14738 602 aa12.37□□□□□ -0.43
SPG7-216ENST00000567138 MAPK6Q16659 721 aa12.37□□□□□ -0.43
SPG7-216ENST00000567138 VITQ6UXI7 678 aa12.37□□□□□ -0.43
SPG7-216ENST00000567138 PRR23CQ6ZRP0 262 aa12.37□□□□□ -0.43
SPG7-216ENST00000567138 ANKS3Q6ZW76 656 aa12.37□□□□□ -0.43
SPG7-216ENST00000567138 RTL10Q7L3V2 364 aa12.37□□□□□ -0.43
SPG7-216ENST00000567138 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.37□□□□□ -0.43
SPG7-216ENST00000567138 CELF5Q8N6W0 485 aaKnown RBP12.37□□□□□ -0.43
SPG7-216ENST00000567138 MCPH1Q8NEM0 835 aa12.37□□□□□ -0.43
SPG7-216ENST00000567138 ASB16Q96NS5 453 aa12.37□□□□□ -0.43
SPG7-216ENST00000567138 PPP1R10Q96QC0 940 aaKnown RBP12.37□□□□□ -0.43
SPG7-216ENST00000567138 KIFC3Q9BVG8 833 aa12.37□□□□□ -0.43
SPG7-216ENST00000567138 CCDC113Q9H0I3 377 aa12.37□□□□□ -0.43
SPG7-216ENST00000567138 C2orf40Q9H1Z8 148 aa12.37□□□□□ -0.43
SPG7-216ENST00000567138 SEMA4GQ9NTN9 838 aa12.37□□□□□ -0.43
SPG7-216ENST00000567138 ZNF638Q14966 1978 aaKnown RBP12.37□□□□□ -0.43
SPG7-216ENST00000567138 CHURC1-FNTBB4DL54 471 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 GDF9O60383 454 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 NEMFO60524 1076 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 SEC24AO95486 1093 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 HSP90AA1P07900 732 aaKnown RBP12.36□□□□□ -0.43
SPG7-216ENST00000567138 FNTBP49356 437 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 GUCY1B3Q02153 619 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 SOX4Q06945 474 aaPredicted RBP12.36□□□□□ -0.43
SPG7-216ENST00000567138 TRIM29Q14134 588 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 SIM2Q14190 667 aaPredicted RBP12.36□□□□□ -0.43
SPG7-216ENST00000567138 GAS6Q14393 721 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 UPP1Q16831 310 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 DCAF4L1Q3SXM0 396 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 PDZD4Q76G19 769 aaPredicted RBP12.36□□□□□ -0.43
SPG7-216ENST00000567138 MAP4K3Q8IVH8 894 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 DEPTORQ8TB45 409 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 IRF7Q92985 503 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 TNFRSF25Q93038 417 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 C8orf76Q96K31 380 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 ZSWIM3Q96MP5 696 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 IER2Q9BTL4 223 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 CYP4F11Q9HBI6 524 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 ZNF334Q9HCZ1 680 aaPredicted RBP12.36□□□□□ -0.43
SPG7-216ENST00000567138 KIF3AQ9Y496 699 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 INSL5Q9Y5Q6 135 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 ZFHX4Q86UP3 3567 aa12.36□□□□□ -0.43
SPG7-216ENST00000567138 ACKR2O00590 384 aa12.35□□□□□ -0.43
SPG7-216ENST00000567138 TRAPPC3O43617 180 aa12.35□□□□□ -0.43
SPG7-216ENST00000567138 LRP3O75074 770 aa12.35□□□□□ -0.43
SPG7-216ENST00000567138 MED24O75448 989 aa12.35□□□□□ -0.43
SPG7-216ENST00000567138 SPATA31C1P0DKV0 1188 aa12.35□□□□□ -0.43
SPG7-216ENST00000567138 GJA1P17302 382 aa12.35□□□□□ -0.43
SPG7-216ENST00000567138 CCNE1P24864 410 aa12.35□□□□□ -0.43
SPG7-216ENST00000567138 ANP32AP39687 249 aaKnown RBP12.35□□□□□ -0.43
SPG7-216ENST00000567138 VIPR2P41587 438 aa12.35□□□□□ -0.43
SPG7-216ENST00000567138 HEATR6Q6AI08 1181 aaKnown RBP12.35□□□□□ -0.43
SPG7-216ENST00000567138 SLC8B1Q6J4K2 584 aa12.35□□□□□ -0.43
SPG7-216ENST00000567138 CEP120Q8N960 986 aa12.35□□□□□ -0.43
SPG7-216ENST00000567138 ZNF461Q8TAF7 563 aa12.35□□□□□ -0.43
SPG7-216ENST00000567138 UROC1Q96N76 676 aa12.35□□□□□ -0.43
SPG7-216ENST00000567138 POLD4Q9HCU8 107 aa12.35□□□□□ -0.43
SPG7-216ENST00000567138 RBM12Q9NTZ6 932 aaKnown RBP12.35□□□□□ -0.43
SPG7-216ENST00000567138 RBM19Q9Y4C8 960 aaKnown RBP12.35□□□□□ -0.43
SPG7-216ENST00000567138 DENND4CQ5VZ89 1909 aa12.34□□□□□ -0.43
SPG7-216ENST00000567138 BTBD18B2RXH4 712 aa12.34□□□□□ -0.43
SPG7-216ENST00000567138 ZNF197O14709 1029 aa12.34□□□□□ -0.43
SPG7-216ENST00000567138 HRO43593 1189 aa12.34□□□□□ -0.43
SPG7-216ENST00000567138 MOSPD3O75425 235 aa12.34□□□□□ -0.43
SPG7-216ENST00000567138 ABLIM3O94929 683 aa12.34□□□□□ -0.43
SPG7-216ENST00000567138 CHRNB1P11230 501 aa12.34□□□□□ -0.43
SPG7-216ENST00000567138 MYL4P12829 197 aa12.34□□□□□ -0.43
SPG7-216ENST00000567138 ATF2P15336 505 aa12.34□□□□□ -0.43
SPG7-216ENST00000567138 PSMC3P17980 439 aa12.34□□□□□ -0.43
SPG7-216ENST00000567138 NAMPTP43490 491 aa12.34□□□□□ -0.43
SPG7-216ENST00000567138 CXCL12P48061 93 aa12.34□□□□□ -0.43
SPG7-216ENST00000567138 NT5DC1Q5TFE4 455 aa12.34□□□□□ -0.43
SPG7-216ENST00000567138 ATF7IP2Q5U623 682 aa12.34□□□□□ -0.43
SPG7-216ENST00000567138 LARP1BQ659C4 914 aaKnown RBP12.34□□□□□ -0.43
SPG7-216ENST00000567138 FBXO18Q8NFZ0 1043 aa12.34□□□□□ -0.43
SPG7-216ENST00000567138 DEPDC1BQ8WUY9 529 aa12.34□□□□□ -0.43
SPG7-216ENST00000567138 SMARCD2Q92925 531 aa12.34□□□□□ -0.43
SPG7-216ENST00000567138 TMEM60Q9H2L4 133 aa12.34□□□□□ -0.43
SPG7-216ENST00000567138 RALYQ9UKM9 306 aaKnown RBP12.34□□□□□ -0.43
SPG7-216ENST00000567138 TSC2P49815 1807 aa12.33□□□□□ -0.43
SPG7-216ENST00000567138 SMIM28A0A1B0GU29 152 aa12.33□□□□□ -0.44
SPG7-216ENST00000567138 ARHGEF35A5YM69 484 aa12.33□□□□□ -0.44
SPG7-216ENST00000567138 SLC38A8A6NNN8 435 aa12.33□□□□□ -0.44
SPG7-216ENST00000567138 PODXLO00592 558 aa12.33□□□□□ -0.44
SPG7-216ENST00000567138 ZNF263O14978 683 aa12.33□□□□□ -0.44
SPG7-216ENST00000567138 XRCC6P12956 609 aaKnown RBP eCLIP12.33□□□□□ -0.44
SPG7-216ENST00000567138 HOXC13P31276 330 aa12.33□□□□□ -0.44
SPG7-216ENST00000567138 SOX9P48436 509 aa12.33□□□□□ -0.44
SPG7-216ENST00000567138 OSTNP61366 133 aa12.33□□□□□ -0.44
SPG7-216ENST00000567138 TWF1Q12792 350 aa12.33□□□□□ -0.44
SPG7-216ENST00000567138 TEAD2Q15562 447 aa12.33□□□□□ -0.44
SPG7-216ENST00000567138 CSRP2Q16527 193 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms