RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 MARSP56192 900 aaKnown RBP21.92■■□□□ 1.1
RNF40-210ENST00000566811 CREMQ03060 361 aa21.92■■□□□ 1.1
RNF40-210ENST00000566811 TYRO3Q06418 890 aa21.92■■□□□ 1.1
RNF40-210ENST00000566811 SPAG1Q07617 926 aa21.92■■□□□ 1.1
RNF40-210ENST00000566811 TPD52L1Q16890 204 aaPredicted RBP21.92■■□□□ 1.1
RNF40-210ENST00000566811 C9orf57Q5W0N0 161 aa21.92■■□□□ 1.1
RNF40-210ENST00000566811 FAM114A1Q8IWE2 563 aa21.92■■□□□ 1.1
RNF40-210ENST00000566811 RNF168Q8IYW5 571 aaPredicted RBP21.92■■□□□ 1.1
RNF40-210ENST00000566811 POF1BQ8WVV4 589 aa21.92■■□□□ 1.1
RNF40-210ENST00000566811 CCDC127Q96BQ5 260 aa21.92■■□□□ 1.1
RNF40-210ENST00000566811 HERC2P3Q9BVR0 1158 aa21.92■■□□□ 1.1
RNF40-210ENST00000566811 MTMR12Q9C0I1 747 aa21.92■■□□□ 1.1
RNF40-210ENST00000566811 PRDM12Q9H4Q4 367 aa21.92■■□□□ 1.1
RNF40-210ENST00000566811 ARMCX3Q9UH62 379 aaPredicted RBP21.92■■□□□ 1.1
RNF40-210ENST00000566811 NUB1Q9Y5A7 615 aa21.92■■□□□ 1.1
RNF40-210ENST00000566811 SCN1AP35498 2009 aa21.92■■□□□ 1.1
RNF40-210ENST00000566811 VWA8A3KMH1 1905 aa21.92■■□□□ 1.1
RNF40-210ENST00000566811 EPOPA6NHQ4 379 aa21.91■■□□□ 1.1
RNF40-210ENST00000566811 PIRO00625 290 aa21.91■■□□□ 1.1
RNF40-210ENST00000566811 CAVIN2O95810 425 aa21.91■■□□□ 1.1
RNF40-210ENST00000566811 EFEMP2O95967 443 aa21.91■■□□□ 1.1
RNF40-210ENST00000566811 SV2CQ496J9 727 aa21.91■■□□□ 1.1
RNF40-210ENST00000566811 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.91■■□□□ 1.1
RNF40-210ENST00000566811 TMEM173Q86WV6 379 aaPredicted RBP21.91■■□□□ 1.1
RNF40-210ENST00000566811 C1orf127Q8N9H9 656 aa21.91■■□□□ 1.1
RNF40-210ENST00000566811 PPM1EQ8WY54 764 aa21.91■■□□□ 1.1
RNF40-210ENST00000566811 BORCS6Q96GS4 357 aa21.91■■□□□ 1.1
RNF40-210ENST00000566811 PAAF1Q9BRP4 392 aa21.91■■□□□ 1.1
RNF40-210ENST00000566811 TSC2P49815 1807 aa21.91■■□□□ 1.1
RNF40-210ENST00000566811 LRRIQ3A6PVS8 624 aaPredicted RBP21.9■■□□□ 1.1
RNF40-210ENST00000566811 TNFRSF10AO00220 468 aa21.9■■□□□ 1.1
RNF40-210ENST00000566811 SYN3O14994 580 aa21.9■■□□□ 1.1
RNF40-210ENST00000566811 GRM6O15303 877 aa21.9■■□□□ 1.1
RNF40-210ENST00000566811 LPXNO60711 386 aa21.9■■□□□ 1.1
RNF40-210ENST00000566811 AARSP49588 968 aaKnown RBP eCLIP21.9■■□□□ 1.1
RNF40-210ENST00000566811 TAF6P49848 677 aa21.9■■□□□ 1.1
RNF40-210ENST00000566811 WNT7BP56706 349 aa21.9■■□□□ 1.1
RNF40-210ENST00000566811 STX17P56962 302 aa21.9■■□□□ 1.1
RNF40-210ENST00000566811 RBP5P82980 135 aa21.9■■□□□ 1.1
RNF40-210ENST00000566811 MYO1EQ12965 1108 aa21.9■■□□□ 1.1
RNF40-210ENST00000566811 SMC1AQ14683 1233 aaKnown RBP21.9■■□□□ 1.1
RNF40-210ENST00000566811 USP41Q3LFD5 358 aa21.9■■□□□ 1.1
RNF40-210ENST00000566811 ENOX1Q8TC92 643 aaKnown RBP21.9■■□□□ 1.1
RNF40-210ENST00000566811 ZBP1Q9H171 429 aa21.9■■□□□ 1.1
RNF40-210ENST00000566811 THAP9Q9H5L6 903 aa21.9■■□□□ 1.1
RNF40-210ENST00000566811 ALG13Q9NP73 1137 aaKnown RBP21.9■■□□□ 1.1
RNF40-210ENST00000566811 IRAK3Q9Y616 596 aa21.9■■□□□ 1.1
RNF40-210ENST00000566811 MUC3AQ02505 3323 aa21.89■■□□□ 1.1
RNF40-210ENST00000566811 PTPRJQ12913 1337 aa21.89■■□□□ 1.1
RNF40-210ENST00000566811 ITGB3P05106 788 aa21.89■■□□□ 1.09
RNF40-210ENST00000566811 URODP06132 367 aa21.89■■□□□ 1.09
RNF40-210ENST00000566811 CTSAP10619 480 aa21.89■■□□□ 1.09
RNF40-210ENST00000566811 ATICP31939 592 aa21.89■■□□□ 1.09
RNF40-210ENST00000566811 CCDC40Q4G0X9 1142 aa21.89■■□□□ 1.09
RNF40-210ENST00000566811 TRAPPC11Q7Z392 1133 aa21.89■■□□□ 1.09
RNF40-210ENST00000566811 VPS52Q8N1B4 723 aa21.89■■□□□ 1.09
RNF40-210ENST00000566811 BCL7CQ8WUZ0 217 aaPredicted RBP21.89■■□□□ 1.09
RNF40-210ENST00000566811 SUSD3Q96L08 255 aa21.89■■□□□ 1.09
RNF40-210ENST00000566811 BPIFA3Q9BQP9 254 aa21.89■■□□□ 1.09
RNF40-210ENST00000566811 SRRTQ9BXP5 876 aaKnown RBP21.89■■□□□ 1.09
RNF40-210ENST00000566811 GZF1Q9H116 711 aaPredicted RBP21.89■■□□□ 1.09
RNF40-210ENST00000566811 ENTPD7Q9NQZ7 604 aa21.89■■□□□ 1.09
RNF40-210ENST00000566811 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.89■■□□□ 1.09
RNF40-210ENST00000566811 FSCN2O14926 492 aa21.88■■□□□ 1.09
RNF40-210ENST00000566811 STAU1O95793 577 aaKnown RBP21.88■■□□□ 1.09
RNF40-210ENST00000566811 POLR2BP30876 1174 aaKnown RBP21.88■■□□□ 1.09
RNF40-210ENST00000566811 GLUD2P49448 558 aa21.88■■□□□ 1.09
RNF40-210ENST00000566811 ADGRE1Q14246 886 aa21.88■■□□□ 1.09
RNF40-210ENST00000566811 ZACNQ401N2 412 aa21.88■■□□□ 1.09
RNF40-210ENST00000566811 TMC7Q7Z402 723 aa21.88■■□□□ 1.09
RNF40-210ENST00000566811 C3orf58Q8NDZ4 430 aa21.88■■□□□ 1.09
RNF40-210ENST00000566811 OR5B17Q8NGF7 314 aa21.88■■□□□ 1.09
RNF40-210ENST00000566811 TCF25Q9BQ70 676 aa21.88■■□□□ 1.09
RNF40-210ENST00000566811 TTPALQ9BTX7 342 aa21.88■■□□□ 1.09
RNF40-210ENST00000566811 OXCT2Q9BYC2 517 aaPredicted RBP21.88■■□□□ 1.09
RNF40-210ENST00000566811 TMEM8AQ9HCN3 771 aa21.88■■□□□ 1.09
RNF40-210ENST00000566811 MRPL17Q9NRX2 175 aaKnown RBP21.88■■□□□ 1.09
RNF40-210ENST00000566811 CHST7Q9NS84 486 aa21.88■■□□□ 1.09
RNF40-210ENST00000566811 M0QZQ0 153 aa21.87■■□□□ 1.09
RNF40-210ENST00000566811 N4BP1O75113 896 aaKnown RBP21.87■■□□□ 1.09
RNF40-210ENST00000566811 LILRA4P59901 499 aa21.87■■□□□ 1.09
RNF40-210ENST00000566811 MYL5Q02045 173 aa21.87■■□□□ 1.09
RNF40-210ENST00000566811 DSG1Q02413 1049 aa21.87■■□□□ 1.09
RNF40-210ENST00000566811 TRPC3Q13507 836 aa21.87■■□□□ 1.09
RNF40-210ENST00000566811 ZSCAN23Q3MJ62 389 aa21.87■■□□□ 1.09
RNF40-210ENST00000566811 KIAA1841Q6NSI8 718 aa21.87■■□□□ 1.09
RNF40-210ENST00000566811 APPL2Q8NEU8 664 aa21.87■■□□□ 1.09
RNF40-210ENST00000566811 CXorf38Q8TB03 319 aa21.87■■□□□ 1.09
RNF40-210ENST00000566811 SPATA18Q8TC71 538 aa21.87■■□□□ 1.09
RNF40-210ENST00000566811 PLEKHO2Q8TD55 490 aa21.87■■□□□ 1.09
RNF40-210ENST00000566811 TAF4BQ92750 862 aa21.87■■□□□ 1.09
RNF40-210ENST00000566811 EEF2KMTQ96G04 330 aa21.87■■□□□ 1.09
RNF40-210ENST00000566811 CDCA3Q99618 268 aaPredicted RBP21.87■■□□□ 1.09
RNF40-210ENST00000566811 NSUN3Q9H649 340 aaKnown RBP21.87■■□□□ 1.09
RNF40-210ENST00000566811 CACNG4Q9UBN1 327 aa21.87■■□□□ 1.09
RNF40-210ENST00000566811 DSEQ9UL01 958 aa21.87■■□□□ 1.09
RNF40-210ENST00000566811 AGAP1Q9UPQ3 857 aa21.87■■□□□ 1.09
RNF40-210ENST00000566811 SYCE3A1L190 88 aa21.86■■□□□ 1.09
RNF40-210ENST00000566811 TULP1O00294 542 aaPredicted RBP21.86■■□□□ 1.09
RNF40-210ENST00000566811 PMM2O15305 246 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms