RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 CTNNB1P35222 781 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 PBX3P40426 434 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 OR1G1P47890 313 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 SLC11A1P49279 550 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 BCAR1P56945 870 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 ZNF445P59923 1031 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 DLG4P78352 724 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 ENPEPQ07075 957 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 ZBTB6Q15916 424 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 HSP90AA4PQ58FG1 418 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 FRMD5Q7Z6J6 570 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 CREBRFQ8IUR6 639 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 DHX40Q8IX18 779 aaKnown RBP12.4□□□□□ -0.42
KARS-207ENST00000566560 COLGALT1Q8NBJ5 622 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 OR5B17Q8NGF7 314 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 FAM200AQ8TCP9 573 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 PARD3BQ8TEW8 1205 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 CACTINQ8WUQ7 758 aaKnown RBP12.4□□□□□ -0.42
KARS-207ENST00000566560 CLP1Q92989 425 aaKnown RBP12.4□□□□□ -0.42
KARS-207ENST00000566560 BORCS6Q96GS4 357 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 UROC1Q96N76 676 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 ZNF558Q96NG5 402 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 POP1Q99575 1024 aaKnown RBP12.4□□□□□ -0.42
KARS-207ENST00000566560 MMRN2Q9H8L6 949 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 SAMSN1Q9NSI8 373 aaKnown RBP12.4□□□□□ -0.42
KARS-207ENST00000566560 INTS13Q9NVM9 706 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 MTUS1Q9ULD2 1270 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 ADGRG1Q9Y653 693 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 SCN1AP35498 2009 aa12.4□□□□□ -0.42
KARS-207ENST00000566560 TSC2P49815 1807 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 CARNS1A5YM72 827 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 BECN2A8MW95 431 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 KCNJ18B7U540 433 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 TK2O00142 265 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 PODXLO00592 558 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 IKBKBO14920 756 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 TRIM66O15016 1216 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 KIF4AO95239 1232 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 PPM1AP35813 382 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 ALDH7A1P49419 539 aaKnown RBP12.39□□□□□ -0.43
KARS-207ENST00000566560 AP3M2P53677 418 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 MARSP56192 900 aaKnown RBP12.39□□□□□ -0.43
KARS-207ENST00000566560 LSM11P83369 360 aaKnown RBP eCLIP12.39□□□□□ -0.43
KARS-207ENST00000566560 TAP1Q03518 808 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 BIRC3Q13489 604 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 KCNJ12Q14500 433 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 NCAPHQ15003 741 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 DUOXA2Q1HG44 320 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 KCNT2Q6UVM3 1135 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 SPRED2Q7Z698 418 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 TMEM130Q8N3G9 435 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 SAMD11Q96NU1 681 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 TGS1Q96RS0 853 aaKnown RBP12.39□□□□□ -0.43
KARS-207ENST00000566560 PAAF1Q9BRP4 392 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 C17orf80Q9BSJ5 609 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 SLC28A3Q9HAS3 691 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 CBX8Q9HC52 389 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 DPP3Q9NY33 737 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 ITGA11Q9UKX5 1188 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 PCDHB12Q9Y5F1 795 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 LAMA3Q16787 3333 aa12.39□□□□□ -0.43
KARS-207ENST00000566560 SMTNL1A8MU46 457 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 NT5C1B-RDH14C9J2C7 533 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 STX10O60499 249 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 CLSTN1O94985 981 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 ITGB3P05106 788 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 GALTP07902 379 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 KRT19P08727 400 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 EEF1GP26641 437 aaKnown RBP12.38□□□□□ -0.43
KARS-207ENST00000566560 LRPAP1P30533 357 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 POLR2BP30876 1174 aaKnown RBP12.38□□□□□ -0.43
KARS-207ENST00000566560 MTIF2P46199 727 aaKnown RBP12.38□□□□□ -0.43
KARS-207ENST00000566560 GCLMP48507 274 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 MXI1P50539 228 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 CLCNKBP51801 687 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 CLDN10P78369 228 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 UPP1Q16831 310 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 C1orf220Q5T0J3 134 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 CDKAL1Q5VV42 579 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 TDRD10Q5VZ19 366 aaKnown RBP12.38□□□□□ -0.43
KARS-207ENST00000566560 C9orf57Q5W0N0 161 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 TMEM173Q86WV6 379 aaPredicted RBP12.38□□□□□ -0.43
KARS-207ENST00000566560 IRF2BP1Q8IU81 584 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 TRIM59Q8IWR1 403 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 SLC39A11Q8N1S5 342 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 C1orf127Q8N9H9 656 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 HASPINQ8TF76 798 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 RABGGTAQ92696 567 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 SLC35C1Q96A29 364 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 ZNF560Q96MR9 790 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 FANCLQ9NW38 375 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 MARCH5Q9NX47 278 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 RABGEF1Q9UJ41 708 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 VPS9D1Q9Y2B5 631 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 FAN1Q9Y2M0 1017 aa12.38□□□□□ -0.43
KARS-207ENST00000566560 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.38□□□□□ -0.43
KARS-207ENST00000566560 MYO9BQ13459 2157 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 VWA8A3KMH1 1905 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 TMEM265A0A087WTH1 108 aa12.37□□□□□ -0.43
KARS-207ENST00000566560 F8W810 466 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms