RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ROM1Q03395 351 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 FOXO1Q12778 655 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 KIF22Q14807 665 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 NOLC1Q14978 699 aaKnown RBP eCLIP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 RAB30Q15771 203 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 TSTQ16762 297 aaKnown RBP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 CNKSR3Q6P9H4 555 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 BTNL9Q6UXG8 535 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 FAM47EQ6ZV65 393 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 GAREM2Q75VX8 874 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 BEND5Q7L4P6 421 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 PRRT2Q7Z6L0 340 aaPredicted RBP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 TSPYL5Q86VY4 417 aaPredicted RBP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 FAM129CQ86XR2 697 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 RIOX2Q8IUF8 465 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 TMEM151BQ8IW70 566 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 TDRD7Q8NHU6 1098 aaKnown RBP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 PIWIL2Q8TC59 973 aaKnown RBP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 GAB3Q8WWW8 586 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 RSPH1Q8WYR4 309 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 RADILQ96JH8 1075 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 SNX22Q96L94 193 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 HEXIM2Q96MH2 286 aaKnown RBP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 COG8Q96MW5 612 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 SAMD11Q96NU1 681 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 PRPF18Q99633 342 aaKnown RBP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 PTPN18Q99952 460 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 DUSP15Q9H1R2 295 aaPredicted RBP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 MTG2Q9H4K7 406 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 JMJD4Q9H9V9 463 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 PREBQ9HCU5 417 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 SEPSECSQ9HD40 501 aaKnown RBP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 ZCCHC17Q9NP64 241 aaKnown RBP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 SLAMF7Q9NQ25 335 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 SERHLQ9NQF3 203 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 UCKL1Q9NWZ5 548 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 ERVK13-1Q9NX77 482 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 CWC25Q9NXE8 425 aaPredicted RBP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 NSMCE4AQ9NXX6 385 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 MYOTQ9UBF9 498 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 SRRDQ9UH36 339 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 SRP68Q9UHB9 627 aaKnown RBP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 DUSP13Q9UII6 198 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 VPS28Q9UK41 221 aa3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.78□□□□□ -1.8
HERPUD1-211ENST00000566550 A0A087X0M5 115 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 A0A1B0GX30 115 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 TMEM82A0PJX8 343 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 FAM171A2A8MVW0 826 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 RFXAPO00287 272 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 HNRNPDLO14979 420 aaKnown RBP3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 PSPNO60542 156 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 USO1O60763 962 aaKnown RBP3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 PPP1R11O60927 126 aaPredicted RBP3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 USP1O94782 785 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 AHSGP02765 367 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 APOA4P06727 396 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 ANXA2P07355 339 aaKnown RBP3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 RARBP10826 455 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 ALOX15P16050 662 aaPredicted RBP3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 ADSLP30566 484 aaPredicted RBP3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 POLD2P49005 469 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 RNASE9P60153 205 aaKnown RBP3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 ARF3P61204 181 aaPredicted RBP3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 HTRA4P83105 476 aaPredicted RBP3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 ARF1P84077 181 aaKnown RBP3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 PLIN5Q00G26 463 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 UBE3AQ05086 875 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 PPP3CAQ08209 521 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 MGAT5Q09328 741 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 CUL4BQ13620 913 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 PTK2BQ14289 1009 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 ZNF385BQ569K4 471 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 MROH9Q5TGP6 573 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 TCERG1LQ5VWI1 586 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 CYP4F22Q6NT55 531 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 RNF111Q6ZNA4 994 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 UNC13DQ70J99 1090 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 B4GALNT4Q76KP1 1039 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 RNF44Q7L0R7 432 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 Q8N1Y9 231 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 MPP5Q8N3R9 675 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 ZNF713Q8N859 430 aaPredicted RBP3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 CCDC150Q8NCX0 1101 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 STT3BQ8TCJ2 826 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 CCHCR1Q8TD31 782 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 TNPO1Q92973 898 aaKnown RBP3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 FOXRED1Q96CU9 486 aaPredicted RBP3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 SUCLG2Q96I99 432 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 PKNOX2Q96KN3 472 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 SLF1Q9BQI6 1058 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 NOL10Q9BSC4 688 aaKnown RBP3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 LSM14BQ9BX40 385 aaKnown RBP3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 PAIP1Q9H074 479 aaKnown RBP3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 CCDC68Q9H2F9 335 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 RETREG1Q9H6L5 497 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 SAYSD1Q9NPB0 183 aa3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 RBM12Q9NTZ6 932 aaKnown RBP3.77□□□□□ -1.81
HERPUD1-211ENST00000566550 PIH1D1Q9NWS0 290 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms