RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 IKBKBO14920 756 aa8.82□□□□□ -1
CDH13-208ENST00000566333 SPTLC1O15269 473 aa8.82□□□□□ -1
CDH13-208ENST00000566333 GRM6O15303 877 aa8.82□□□□□ -1
CDH13-208ENST00000566333 XPOTO43592 962 aaKnown RBP8.82□□□□□ -1
CDH13-208ENST00000566333 FGF18O76093 207 aa8.82□□□□□ -1
CDH13-208ENST00000566333 C4BPAP04003 597 aaKnown RBP8.82□□□□□ -1
CDH13-208ENST00000566333 ITGB3P05106 788 aa8.82□□□□□ -1
CDH13-208ENST00000566333 TMEM191BP0C7N4 346 aa8.82□□□□□ -1
CDH13-208ENST00000566333 TNNI1P19237 187 aa8.82□□□□□ -1
CDH13-208ENST00000566333 POLR2BP30876 1174 aaKnown RBP8.82□□□□□ -1
CDH13-208ENST00000566333 ALDH7A1P49419 539 aaKnown RBP8.82□□□□□ -1
CDH13-208ENST00000566333 ZNF445P59923 1031 aa8.82□□□□□ -1
CDH13-208ENST00000566333 IQCB1Q15051 598 aa8.82□□□□□ -1
CDH13-208ENST00000566333 CBWD6Q4V339 395 aa8.82□□□□□ -1
CDH13-208ENST00000566333 HSP90AA4PQ58FG1 418 aa8.82□□□□□ -1
CDH13-208ENST00000566333 DCAF17Q5H9S7 520 aaPredicted RBP8.82□□□□□ -1
CDH13-208ENST00000566333 CBWD3Q5JTY5 395 aa8.82□□□□□ -1
CDH13-208ENST00000566333 CBWD5Q5RIA9 395 aa8.82□□□□□ -1
CDH13-208ENST00000566333 SPOUT1Q5T280 376 aaKnown RBP8.82□□□□□ -1
CDH13-208ENST00000566333 GPR153Q6NV75 609 aa8.82□□□□□ -1
CDH13-208ENST00000566333 LRSAM1Q6UWE0 723 aa8.82□□□□□ -1
CDH13-208ENST00000566333 Q7L0L9 218 aa8.82□□□□□ -1
CDH13-208ENST00000566333 ANKRD36BP1Q96IX9 119 aa8.82□□□□□ -1
CDH13-208ENST00000566333 FAM193BQ96PV7 902 aaPredicted RBP8.82□□□□□ -1
CDH13-208ENST00000566333 FNBP1Q96RU3 617 aa8.82□□□□□ -1
CDH13-208ENST00000566333 C11orf84Q9BUA3 381 aaPredicted RBP8.82□□□□□ -1
CDH13-208ENST00000566333 GPR62Q9BZJ7 368 aa8.82□□□□□ -1
CDH13-208ENST00000566333 XYLT2Q9H1B5 865 aa8.82□□□□□ -1
CDH13-208ENST00000566333 SPG21Q9NZD8 308 aa8.82□□□□□ -1
CDH13-208ENST00000566333 ARMCX3Q9UH62 379 aaPredicted RBP8.82□□□□□ -1
CDH13-208ENST00000566333 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.82□□□□□ -1
CDH13-208ENST00000566333 MYH10P35580 1976 aa8.82□□□□□ -1
CDH13-208ENST00000566333 SF3B1O75533 1304 aaKnown RBP eCLIP8.81□□□□□ -1
CDH13-208ENST00000566333 CARNS1A5YM72 827 aa8.81□□□□□ -1
CDH13-208ENST00000566333 I3L4J1 428 aa8.81□□□□□ -1
CDH13-208ENST00000566333 RFXAPO00287 272 aa8.81□□□□□ -1
CDH13-208ENST00000566333 FSCN2O14926 492 aa8.81□□□□□ -1
CDH13-208ENST00000566333 B3GAT3O94766 335 aa8.81□□□□□ -1
CDH13-208ENST00000566333 GNA14O95837 355 aa8.81□□□□□ -1
CDH13-208ENST00000566333 TNNC2P02585 160 aa8.81□□□□□ -1
CDH13-208ENST00000566333 RB1P06400 928 aa8.81□□□□□ -1
CDH13-208ENST00000566333 KRT13P13646 458 aa8.81□□□□□ -1
CDH13-208ENST00000566333 RPL9P32969 192 aaKnown RBP8.81□□□□□ -1
CDH13-208ENST00000566333 BRCC3P46736 316 aa8.81□□□□□ -1
CDH13-208ENST00000566333 GCLMP48507 274 aa8.81□□□□□ -1
CDH13-208ENST00000566333 ZNF165P49910 485 aa8.81□□□□□ -1
CDH13-208ENST00000566333 MXI1P50539 228 aa8.81□□□□□ -1
CDH13-208ENST00000566333 PLCB3Q01970 1234 aa8.81□□□□□ -1
CDH13-208ENST00000566333 GRIN2CQ14957 1233 aa8.81□□□□□ -1
CDH13-208ENST00000566333 DUOXA2Q1HG44 320 aa8.81□□□□□ -1
CDH13-208ENST00000566333 CCDC40Q4G0X9 1142 aa8.81□□□□□ -1
CDH13-208ENST00000566333 MIIPQ5JXC2 388 aa8.81□□□□□ -1
CDH13-208ENST00000566333 ZNF697Q5TEC3 545 aa8.81□□□□□ -1
CDH13-208ENST00000566333 FUT10Q6P4F1 479 aa8.81□□□□□ -1
CDH13-208ENST00000566333 SV2AQ7L0J3 742 aa8.81□□□□□ -1
CDH13-208ENST00000566333 APTXQ7Z2E3 356 aaKnown RBP8.81□□□□□ -1
CDH13-208ENST00000566333 TRAPPC11Q7Z392 1133 aa8.81□□□□□ -1
CDH13-208ENST00000566333 LRRC52Q8N7C0 313 aa8.81□□□□□ -1
CDH13-208ENST00000566333 SPPL3Q8TCT6 385 aa8.81□□□□□ -1
CDH13-208ENST00000566333 TAS1R2Q8TE23 839 aa8.81□□□□□ -1
CDH13-208ENST00000566333 ELMO3Q96BJ8 720 aa8.81□□□□□ -1
CDH13-208ENST00000566333 DDX27Q96GQ7 796 aaKnown RBP8.81□□□□□ -1
CDH13-208ENST00000566333 TMEM169Q96HH4 297 aa8.81□□□□□ -1
CDH13-208ENST00000566333 B3GALT6Q96L58 329 aa8.81□□□□□ -1
CDH13-208ENST00000566333 HERC2P3Q9BVR0 1158 aa8.81□□□□□ -1
CDH13-208ENST00000566333 ZBP1Q9H171 429 aa8.81□□□□□ -1
CDH13-208ENST00000566333 CBX8Q9HC52 389 aa8.81□□□□□ -1
CDH13-208ENST00000566333 METTL14Q9HCE5 456 aaKnown RBP8.81□□□□□ -1
CDH13-208ENST00000566333 TMEM8AQ9HCN3 771 aa8.81□□□□□ -1
CDH13-208ENST00000566333 ALG13Q9NP73 1137 aaKnown RBP8.81□□□□□ -1
CDH13-208ENST00000566333 AAASQ9NRG9 546 aa8.81□□□□□ -1
CDH13-208ENST00000566333 FANCLQ9NW38 375 aa8.81□□□□□ -1
CDH13-208ENST00000566333 LZTS1Q9Y250 596 aa8.81□□□□□ -1
CDH13-208ENST00000566333 FAN1Q9Y2M0 1017 aa8.81□□□□□ -1
CDH13-208ENST00000566333 PCDHB12Q9Y5F1 795 aa8.81□□□□□ -1
CDH13-208ENST00000566333 PCDHGC5Q9Y5F6 944 aa8.81□□□□□ -1
CDH13-208ENST00000566333 GREB1Q4ZG55 1949 aa8.81□□□□□ -1
CDH13-208ENST00000566333 DOCK6Q96HP0 2047 aa8.81□□□□□ -1
CDH13-208ENST00000566333 OBSL1O75147 1896 aa8.81□□□□□ -1
CDH13-208ENST00000566333 DENND4AQ7Z401 1863 aa8.81□□□□□ -1
CDH13-208ENST00000566333 KCNJ18B7U540 433 aa8.8□□□□□ -1
CDH13-208ENST00000566333 M0QZQ0 153 aa8.8□□□□□ -1
CDH13-208ENST00000566333 PMM2O15305 246 aa8.8□□□□□ -1
CDH13-208ENST00000566333 LRRN2O75325 713 aa8.8□□□□□ -1
CDH13-208ENST00000566333 STAU1O95793 577 aaKnown RBP8.8□□□□□ -1
CDH13-208ENST00000566333 CST3P01034 146 aaPredicted RBP8.8□□□□□ -1
CDH13-208ENST00000566333 HLA-DRAP01903 254 aa8.8□□□□□ -1
CDH13-208ENST00000566333 SOD2P04179 222 aa8.8□□□□□ -1
CDH13-208ENST00000566333 ALDH2P05091 517 aa8.8□□□□□ -1
CDH13-208ENST00000566333 ATP1A3P13637 1013 aa8.8□□□□□ -1
CDH13-208ENST00000566333 GTF2H1P32780 548 aa8.8□□□□□ -1
CDH13-208ENST00000566333 IRS1P35568 1242 aa8.8□□□□□ -1
CDH13-208ENST00000566333 FMO5P49326 533 aa8.8□□□□□ -1
CDH13-208ENST00000566333 TAF6P49848 677 aa8.8□□□□□ -1
CDH13-208ENST00000566333 AP3M2P53677 418 aa8.8□□□□□ -1
CDH13-208ENST00000566333 LILRA4P59901 499 aa8.8□□□□□ -1
CDH13-208ENST00000566333 MYL7Q01449 175 aa8.8□□□□□ -1
CDH13-208ENST00000566333 UBE3AQ05086 875 aa8.8□□□□□ -1
CDH13-208ENST00000566333 GPM6BQ13491 265 aa8.8□□□□□ -1
CDH13-208ENST00000566333 NCOA4Q13772 614 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms