RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 TYMPP19971 482 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 SYT1P21579 422 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 ELF1P32519 619 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 LIG4P49917 911 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 EPHA5P54756 1037 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 STARD6P59095 220 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 KARSQ15046 597 aaKnown RBP16.52■□□□□ 0.24
CMTM3-212ENST00000566121 PABPC1LQ4VXU2 614 aaKnown RBP16.52■□□□□ 0.24
CMTM3-212ENST00000566121 SPATA1Q5VX52 437 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 ZNF280DQ6N043 979 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 ZNF720Q7Z2F6 126 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 SIX5Q8N196 739 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 DDX12PQ92771 950 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 SHDQ96IW2 340 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 PLIN2Q99541 437 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 DDX23Q9BUQ8 820 aaKnown RBP16.52■□□□□ 0.24
CMTM3-212ENST00000566121 OSBPL6Q9BZF3 934 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 ANKFY1Q9P2R3 1169 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 CCDC39Q9UFE4 941 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 FBXL21Q9UKT6 434 aa16.52■□□□□ 0.24
CMTM3-212ENST00000566121 KRBA1A5PL33 1030 aa16.51■□□□□ 0.23
CMTM3-212ENST00000566121 ZNF197O14709 1029 aa16.51■□□□□ 0.23
CMTM3-212ENST00000566121 CCL16O15467 120 aa16.51■□□□□ 0.23
CMTM3-212ENST00000566121 NARSO43776 548 aaKnown RBP16.51■□□□□ 0.23
CMTM3-212ENST00000566121 ECI2O75521 394 aa16.51■□□□□ 0.23
CMTM3-212ENST00000566121 PPP1R37O75864 691 aa16.51■□□□□ 0.23
CMTM3-212ENST00000566121 MARCKSP29966 332 aaPredicted RBP16.51■□□□□ 0.23
CMTM3-212ENST00000566121 PFKPQ01813 784 aa16.51■□□□□ 0.23
CMTM3-212ENST00000566121 PRKCQQ04759 706 aa16.51■□□□□ 0.23
CMTM3-212ENST00000566121 GRIN1Q05586 938 aa16.51■□□□□ 0.23
CMTM3-212ENST00000566121 PPP2R3AQ06190 1150 aa16.51■□□□□ 0.23
CMTM3-212ENST00000566121 RESTQ13127 1097 aa16.51■□□□□ 0.23
CMTM3-212ENST00000566121 MCM6Q14566 821 aa16.51■□□□□ 0.23
CMTM3-212ENST00000566121 SLC39A14Q15043 492 aa16.51■□□□□ 0.23
CMTM3-212ENST00000566121 ENOX2Q16206 610 aaKnown RBP16.51■□□□□ 0.23
CMTM3-212ENST00000566121 GET4Q7L5D6 327 aaPredicted RBP16.51■□□□□ 0.23
CMTM3-212ENST00000566121 NT5DC4Q86YG4 428 aa16.51■□□□□ 0.23
CMTM3-212ENST00000566121 KRI1Q8N9T8 703 aaKnown RBP16.51■□□□□ 0.23
CMTM3-212ENST00000566121 RSAD2Q8WXG1 361 aa16.51■□□□□ 0.23
CMTM3-212ENST00000566121 ATOH1Q92858 354 aaPredicted RBP16.51■□□□□ 0.23
CMTM3-212ENST00000566121 RPF1Q9H9Y2 349 aaKnown RBP16.51■□□□□ 0.23
CMTM3-212ENST00000566121 FBXO2Q9UK22 296 aaPredicted RBP16.51■□□□□ 0.23
CMTM3-212ENST00000566121 C2CD2Q9Y426 696 aa16.51■□□□□ 0.23
CMTM3-212ENST00000566121 NUMBLQ9Y6R0 609 aa16.51■□□□□ 0.23
CMTM3-212ENST00000566121 SPTBN4Q9H254 2564 aa16.51■□□□□ 0.23
CMTM3-212ENST00000566121 PDCD11Q14690 1871 aaKnown RBP16.5■□□□□ 0.23
CMTM3-212ENST00000566121 OR6C75A6NL08 312 aa16.5■□□□□ 0.23
CMTM3-212ENST00000566121 LACTBL1A8MY62 500 aa16.5■□□□□ 0.23
CMTM3-212ENST00000566121 TBCAO75347 108 aaKnown RBP16.5■□□□□ 0.23
CMTM3-212ENST00000566121 CXCL8P10145 99 aa16.5■□□□□ 0.23
CMTM3-212ENST00000566121 GAP43P17677 238 aa16.5■□□□□ 0.23
CMTM3-212ENST00000566121 MYBPC2Q14324 1141 aa16.5■□□□□ 0.23
CMTM3-212ENST00000566121 POSTNQ15063 836 aa16.5■□□□□ 0.23
CMTM3-212ENST00000566121 SLC39A4Q6P5W5 647 aa16.5■□□□□ 0.23
CMTM3-212ENST00000566121 PARM1Q6UWI2 310 aa16.5■□□□□ 0.23
CMTM3-212ENST00000566121 NPAS3Q8IXF0 933 aa16.5■□□□□ 0.23
CMTM3-212ENST00000566121 DTWD2Q8NBA8 298 aa16.5■□□□□ 0.23
CMTM3-212ENST00000566121 ITFG1Q8TB96 612 aa16.5■□□□□ 0.23
CMTM3-212ENST00000566121 FGF14Q92915 247 aa16.5■□□□□ 0.23
CMTM3-212ENST00000566121 BICD1Q96G01 975 aa16.5■□□□□ 0.23
CMTM3-212ENST00000566121 SEMA4AQ9H3S1 761 aa16.5■□□□□ 0.23
CMTM3-212ENST00000566121 OLFML3Q9NRN5 406 aa16.5■□□□□ 0.23
CMTM3-212ENST00000566121 F5P12259 2224 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 ANO9A1A5B4 782 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 FRMD3A2A2Y4 597 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 I3L4J1 428 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 K7ENM7 598 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 PIRO00625 290 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 PI15O43692 258 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 LRG1P02750 347 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 CYP11A1P05108 521 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 RHOP08100 348 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 MYBP10242 640 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 MCM4P33991 863 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 LILRA4P59901 499 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 GPR17Q13304 367 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 ALCAMQ13740 583 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 CTXN3Q4LDR2 81 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 PRSS36Q5K4E3 855 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 CCDC73Q6ZRK6 1079 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 FLCNQ8NFG4 579 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 GPR152Q8TDT2 470 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 ELSPBP1Q96BH3 223 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 DNAJC19Q96DA6 116 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 KIF12Q96FN5 646 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 EPSTI1Q96J88 318 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 MSTO1Q9BUK6 570 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 GPR88Q9GZN0 384 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 TRPV4Q9HBA0 871 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 TRPV5Q9NQA5 729 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 ARHGEF3Q9NR81 526 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 DLGAP2Q9P1A6 1054 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 TUBGCP4Q9UGJ1 667 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 MRPS23Q9Y3D9 190 aaKnown RBP16.49■□□□□ 0.23
CMTM3-212ENST00000566121 CLIC4Q9Y696 253 aa16.49■□□□□ 0.23
CMTM3-212ENST00000566121 EP300Q09472 2414 aaPredicted RBP16.49■□□□□ 0.23
CMTM3-212ENST00000566121 VPS37CA5D8V6 355 aaPredicted RBP16.48■□□□□ 0.23
CMTM3-212ENST00000566121 H0Y858 1186 aa16.48■□□□□ 0.23
CMTM3-212ENST00000566121 KRT18P05783 430 aaKnown RBP16.48■□□□□ 0.23
CMTM3-212ENST00000566121 HARSP12081 509 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms