RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 LRRC43Q8N309 656 aa16.48■□□□□ 0.23
KNOP1-203ENST00000565844 DPP3Q9NY33 737 aa16.48■□□□□ 0.23
KNOP1-203ENST00000565844 MTCH2Q9Y6C9 303 aa16.48■□□□□ 0.23
KNOP1-203ENST00000565844 ATG2AQ2TAZ0 1938 aa16.47■□□□□ 0.23
KNOP1-203ENST00000565844 GOLGA6L3A6NEY3 463 aa16.47■□□□□ 0.23
KNOP1-203ENST00000565844 LRRC10BA6NIK2 292 aa16.47■□□□□ 0.23
KNOP1-203ENST00000565844 LGALS16A8MUM7 142 aa16.47■□□□□ 0.23
KNOP1-203ENST00000565844 TFF2Q03403 129 aa16.47■□□□□ 0.23
KNOP1-203ENST00000565844 SOX4Q06945 474 aaPredicted RBP16.47■□□□□ 0.23
KNOP1-203ENST00000565844 NAB2Q15742 525 aa16.47■□□□□ 0.23
KNOP1-203ENST00000565844 UVSSAQ2YD98 709 aa16.47■□□□□ 0.23
KNOP1-203ENST00000565844 ZACNQ401N2 412 aa16.47■□□□□ 0.23
KNOP1-203ENST00000565844 FILIP1LQ4L180 1135 aa16.47■□□□□ 0.23
KNOP1-203ENST00000565844 FKBP15Q5T1M5 1219 aa16.47■□□□□ 0.23
KNOP1-203ENST00000565844 KRT39Q6A163 491 aa16.47■□□□□ 0.23
KNOP1-203ENST00000565844 C15orf39Q6ZRI6 1047 aa16.47■□□□□ 0.23
KNOP1-203ENST00000565844 TRAPPC11Q7Z392 1133 aa16.47■□□□□ 0.23
KNOP1-203ENST00000565844 TMEM130Q8N3G9 435 aa16.47■□□□□ 0.23
KNOP1-203ENST00000565844 ZNF689Q96CS4 500 aaPredicted RBP16.47■□□□□ 0.23
KNOP1-203ENST00000565844 FAM193BQ96PV7 902 aaPredicted RBP16.47■□□□□ 0.23
KNOP1-203ENST00000565844 RC3H2Q9HBD1 1191 aaKnown RBP16.47■□□□□ 0.23
KNOP1-203ENST00000565844 GOLGA2P5Q9HBQ8 144 aa16.47■□□□□ 0.23
KNOP1-203ENST00000565844 ITGA11Q9UKX5 1188 aa16.47■□□□□ 0.23
KNOP1-203ENST00000565844 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.47■□□□□ 0.23
KNOP1-203ENST00000565844 C4BPAP04003 597 aaKnown RBP16.46■□□□□ 0.23
KNOP1-203ENST00000565844 ITGB3P05106 788 aa16.46■□□□□ 0.23
KNOP1-203ENST00000565844 KRT19P08727 400 aa16.46■□□□□ 0.23
KNOP1-203ENST00000565844 CYP3A5P20815 502 aa16.46■□□□□ 0.23
KNOP1-203ENST00000565844 PIK3CAP42336 1068 aa16.46■□□□□ 0.23
KNOP1-203ENST00000565844 TUSC3Q13454 348 aa16.46■□□□□ 0.23
KNOP1-203ENST00000565844 BTG3Q14201 252 aaPredicted RBP16.46■□□□□ 0.23
KNOP1-203ENST00000565844 TJAP1Q5JTD0 557 aa16.46■□□□□ 0.23
KNOP1-203ENST00000565844 ZNF280BQ86YH2 543 aa16.46■□□□□ 0.23
KNOP1-203ENST00000565844 CMTR2Q8IYT2 770 aaKnown RBP16.46■□□□□ 0.23
KNOP1-203ENST00000565844 C1orf127Q8N9H9 656 aa16.46■□□□□ 0.23
KNOP1-203ENST00000565844 IFNKQ9P0W0 207 aa16.46■□□□□ 0.23
KNOP1-203ENST00000565844 CACNG4Q9UBN1 327 aa16.46■□□□□ 0.23
KNOP1-203ENST00000565844 TTC28Q96AY4 2481 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 BRWD1Q9NSI6 2320 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 A0A1B0GTH6 734 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 LINC01553A4QN01 128 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 CASTOR2A6NHX0 329 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 B4GALT3O60512 393 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 LPXNO60711 386 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 DDHD2O94830 711 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 VNN1O95497 513 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 POLR2BP30876 1174 aaKnown RBP16.45■□□□□ 0.22
KNOP1-203ENST00000565844 UBASH3AP57075 661 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 HTRA4P83105 476 aaPredicted RBP16.45■□□□□ 0.22
KNOP1-203ENST00000565844 DSC1Q08554 894 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 CETN1Q12798 172 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 TRPC3Q13507 836 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 GSE1Q14687 1217 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 FBXL13Q8NEE6 735 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 TAS1R2Q8TE23 839 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 NAP1L5Q96NT1 182 aaPredicted RBP16.45■□□□□ 0.22
KNOP1-203ENST00000565844 RAD9AQ99638 391 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 RTN4Q9NQC3 1192 aaKnown RBP16.45■□□□□ 0.22
KNOP1-203ENST00000565844 HCSTQ9UBK5 93 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 DNAJB4Q9UDY4 337 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 SIX4Q9UIU6 781 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 R3HCC1Q9Y3T6 440 aaKnown RBP16.45■□□□□ 0.22
KNOP1-203ENST00000565844 INSL6Q9Y581 213 aa16.45■□□□□ 0.22
KNOP1-203ENST00000565844 SCN1AP35498 2009 aa16.44■□□□□ 0.22
KNOP1-203ENST00000565844 FSD2A1L4K1 749 aa16.44■□□□□ 0.22
KNOP1-203ENST00000565844 PMM2O15305 246 aa16.44■□□□□ 0.22
KNOP1-203ENST00000565844 P4HA2O15460 535 aa16.44■□□□□ 0.22
KNOP1-203ENST00000565844 ZC3H11AO75152 810 aaKnown RBP eCLIP16.44■□□□□ 0.22
KNOP1-203ENST00000565844 CLSTN1O94985 981 aa16.44■□□□□ 0.22
KNOP1-203ENST00000565844 HLA-DRAP01903 254 aa16.44■□□□□ 0.22
KNOP1-203ENST00000565844 LRPAP1P30533 357 aa16.44■□□□□ 0.22
KNOP1-203ENST00000565844 UBXN1Q04323 297 aa16.44■□□□□ 0.22
KNOP1-203ENST00000565844 NCOA4Q13772 614 aa16.44■□□□□ 0.22
KNOP1-203ENST00000565844 C9orf57Q5W0N0 161 aa16.44■□□□□ 0.22
KNOP1-203ENST00000565844 SARM1Q6SZW1 724 aa16.44■□□□□ 0.22
KNOP1-203ENST00000565844 COLGALT2Q8IYK4 626 aa16.44■□□□□ 0.22
KNOP1-203ENST00000565844 RABGGTAQ92696 567 aa16.44■□□□□ 0.22
KNOP1-203ENST00000565844 UROC1Q96N76 676 aa16.44■□□□□ 0.22
KNOP1-203ENST00000565844 C17orf80Q9BSJ5 609 aa16.44■□□□□ 0.22
KNOP1-203ENST00000565844 NRDE2Q9H7Z3 1164 aa16.44■□□□□ 0.22
KNOP1-203ENST00000565844 GCNT4Q9P109 453 aa16.44■□□□□ 0.22
KNOP1-203ENST00000565844 AGAP1Q9UPQ3 857 aa16.44■□□□□ 0.22
KNOP1-203ENST00000565844 GTPBP10A4D1E9 387 aaKnown RBP16.43■□□□□ 0.22
KNOP1-203ENST00000565844 PODXLO00592 558 aa16.43■□□□□ 0.22
KNOP1-203ENST00000565844 PPEF2O14830 753 aa16.43■□□□□ 0.22
KNOP1-203ENST00000565844 AP5Z1O43299 807 aa16.43■□□□□ 0.22
KNOP1-203ENST00000565844 CBFA2T2O43439 604 aa16.43■□□□□ 0.22
KNOP1-203ENST00000565844 TPM3P06753 285 aa16.43■□□□□ 0.22
KNOP1-203ENST00000565844 RPL9P32969 192 aaKnown RBP16.43■□□□□ 0.22
KNOP1-203ENST00000565844 OR1G1P47890 313 aa16.43■□□□□ 0.22
KNOP1-203ENST00000565844 CLCNKBP51801 687 aa16.43■□□□□ 0.22
KNOP1-203ENST00000565844 MYL6P60660 151 aa16.43■□□□□ 0.22
KNOP1-203ENST00000565844 RBP5P82980 135 aa16.43■□□□□ 0.22
KNOP1-203ENST00000565844 EPC2Q52LR7 807 aa16.43■□□□□ 0.22
KNOP1-203ENST00000565844 SPOUT1Q5T280 376 aaKnown RBP16.43■□□□□ 0.22
KNOP1-203ENST00000565844 SCARA3Q6AZY7 606 aa16.43■□□□□ 0.22
KNOP1-203ENST00000565844 GBP6Q6ZN66 633 aa16.43■□□□□ 0.22
KNOP1-203ENST00000565844 CXorf38Q8TB03 319 aa16.43■□□□□ 0.22
KNOP1-203ENST00000565844 DDX27Q96GQ7 796 aaKnown RBP16.43■□□□□ 0.22
KNOP1-203ENST00000565844 ASB2Q96Q27 587 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms