RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 TXLNAP40222 546 aa21.63■■□□□ 1.05
CLN6-206ENST00000565471 ENOX2Q16206 610 aaKnown RBP21.63■■□□□ 1.05
CLN6-206ENST00000565471 CTXN3Q4LDR2 81 aa21.63■■□□□ 1.05
CLN6-206ENST00000565471 PABPC1LQ4VXU2 614 aaKnown RBP21.63■■□□□ 1.05
CLN6-206ENST00000565471 TPGS2Q68CL5 300 aa21.63■■□□□ 1.05
CLN6-206ENST00000565471 FAM173BQ6P4H8 233 aa21.63■■□□□ 1.05
CLN6-206ENST00000565471 SLC39A4Q6P5W5 647 aa21.63■■□□□ 1.05
CLN6-206ENST00000565471 CD302Q8IX05 232 aa21.63■■□□□ 1.05
CLN6-206ENST00000565471 TCEAL8Q8IYN2 117 aa21.63■■□□□ 1.05
CLN6-206ENST00000565471 FLCNQ8NFG4 579 aa21.63■■□□□ 1.05
CLN6-206ENST00000565471 DDX12PQ92771 950 aa21.63■■□□□ 1.05
CLN6-206ENST00000565471 FGF13Q92913 245 aa21.63■■□□□ 1.05
CLN6-206ENST00000565471 MSTO1Q9BUK6 570 aa21.63■■□□□ 1.05
CLN6-206ENST00000565471 AVENQ9NQS1 362 aaPredicted RBP21.63■■□□□ 1.05
CLN6-206ENST00000565471 DNMT3BQ9UBC3 853 aaKnown RBP21.63■■□□□ 1.05
CLN6-206ENST00000565471 MAFFQ9ULX9 164 aa21.63■■□□□ 1.05
CLN6-206ENST00000565471 MTMR6Q9Y217 621 aa21.63■■□□□ 1.05
CLN6-206ENST00000565471 M0QZQ0 153 aa21.62■■□□□ 1.05
CLN6-206ENST00000565471 CFHP08603 1231 aa21.62■■□□□ 1.05
CLN6-206ENST00000565471 AARSP49588 968 aaKnown RBP eCLIP21.62■■□□□ 1.051e-7■■■■■ 41.2
CLN6-206ENST00000565471 SPAG1Q07617 926 aa21.62■■□□□ 1.05
CLN6-206ENST00000565471 ZBTB41Q5SVQ8 909 aa21.62■■□□□ 1.05
CLN6-206ENST00000565471 MTSS1LQ765P7 747 aa21.62■■□□□ 1.05
CLN6-206ENST00000565471 HVCN1Q96D96 273 aa21.62■■□□□ 1.05
CLN6-206ENST00000565471 RTP3Q9BQQ7 232 aa21.62■■□□□ 1.05
CLN6-206ENST00000565471 ZSCAN16Q9H4T2 348 aaPredicted RBP21.62■■□□□ 1.05
CLN6-206ENST00000565471 SLC2A4RGQ9NR83 387 aa21.62■■□□□ 1.05
CLN6-206ENST00000565471 HCFC1R1Q9NWW0 138 aa21.62■■□□□ 1.05
CLN6-206ENST00000565471 CPSF3Q9UKF6 684 aaKnown RBP21.62■■□□□ 1.05
CLN6-206ENST00000565471 NOTCH4Q99466 2003 aa21.62■■□□□ 1.05
CLN6-206ENST00000565471 PRRG1O14668 218 aa21.61■■□□□ 1.05
CLN6-206ENST00000565471 LRG1P02750 347 aa21.61■■□□□ 1.05
CLN6-206ENST00000565471 SLC39A14Q15043 492 aa21.61■■□□□ 1.05
CLN6-206ENST00000565471 RRAGBQ5VZM2 374 aa21.61■■□□□ 1.05
CLN6-206ENST00000565471 SLFN12LQ6IEE8 588 aa21.61■■□□□ 1.05
CLN6-206ENST00000565471 ITFG1Q8TB96 612 aa21.61■■□□□ 1.05
CLN6-206ENST00000565471 CLIC6Q96NY7 704 aa21.61■■□□□ 1.05
CLN6-206ENST00000565471 PHOX2BQ99453 314 aa21.61■■□□□ 1.05
CLN6-206ENST00000565471 OXCT2Q9BYC2 517 aaPredicted RBP21.61■■□□□ 1.05
CLN6-206ENST00000565471 SEL1LQ9UBV2 794 aa21.61■■□□□ 1.05
CLN6-206ENST00000565471 STYXL1Q9Y6J8 313 aa21.61■■□□□ 1.05
CLN6-206ENST00000565471 KRBA1A5PL33 1030 aa21.6■■□□□ 1.05
CLN6-206ENST00000565471 STX6O43752 255 aa21.6■■□□□ 1.05
CLN6-206ENST00000565471 OAZ2O95190 189 aa21.6■■□□□ 1.05
CLN6-206ENST00000565471 ARPP19P56211 112 aa21.6■■□□□ 1.05
CLN6-206ENST00000565471 CEBPZQ03701 1054 aaKnown RBP21.6■■□□□ 1.05
CLN6-206ENST00000565471 ZC2HC1CQ53FD0 456 aaPredicted RBP21.6■■□□□ 1.05
CLN6-206ENST00000565471 SPATA1Q5VX52 437 aa21.6■■□□□ 1.05
CLN6-206ENST00000565471 PARM1Q6UWI2 310 aa21.6■■□□□ 1.05
CLN6-206ENST00000565471 SV2BQ7L1I2 683 aa21.6■■□□□ 1.05
CLN6-206ENST00000565471 DYMQ7RTS9 669 aa21.6■■□□□ 1.05
CLN6-206ENST00000565471 ZNF720Q7Z2F6 126 aa21.6■■□□□ 1.05
CLN6-206ENST00000565471 SFR1Q86XK3 245 aa21.6■■□□□ 1.05
CLN6-206ENST00000565471 NPAS3Q8IXF0 933 aa21.6■■□□□ 1.05
CLN6-206ENST00000565471 FGF14Q92915 247 aa21.6■■□□□ 1.05
CLN6-206ENST00000565471 USP28Q96RU2 1077 aa21.6■■□□□ 1.05
CLN6-206ENST00000565471 CYP4F11Q9HBI6 524 aa21.6■■□□□ 1.05
CLN6-206ENST00000565471 AFF4Q9UHB7 1163 aaKnown RBP21.6■■□□□ 1.05
CLN6-206ENST00000565471 DERAQ9Y315 318 aa21.6■■□□□ 1.05
CLN6-206ENST00000565471 MRPS23Q9Y3D9 190 aaKnown RBP21.6■■□□□ 1.05
CLN6-206ENST00000565471 INSL5Q9Y5Q6 135 aa21.6■■□□□ 1.05
CLN6-206ENST00000565471 ANKRD63C9JTQ0 380 aa21.59■■□□□ 1.05
CLN6-206ENST00000565471 H0Y858 1186 aa21.59■■□□□ 1.05
CLN6-206ENST00000565471 PPP1R37O75864 691 aa21.59■■□□□ 1.05
CLN6-206ENST00000565471 RHOP08100 348 aa21.59■■□□□ 1.05
CLN6-206ENST00000565471 GAP43P17677 238 aa21.59■■□□□ 1.05
CLN6-206ENST00000565471 PTPN2P17706 415 aa21.59■■□□□ 1.05
CLN6-206ENST00000565471 PAX3P23760 479 aa21.59■■□□□ 1.05
CLN6-206ENST00000565471 POU5F1Q01860 360 aaKnown RBP21.59■■□□□ 1.05
CLN6-206ENST00000565471 YWHAHQ04917 246 aaPredicted RBP21.59■■□□□ 1.05
CLN6-206ENST00000565471 CCDC73Q6ZRK6 1079 aa21.59■■□□□ 1.05
CLN6-206ENST00000565471 TMEM130Q8N3G9 435 aa21.59■■□□□ 1.05
CLN6-206ENST00000565471 BEST2Q8NFU1 509 aa21.59■■□□□ 1.05
CLN6-206ENST00000565471 GPR152Q8TDT2 470 aa21.59■■□□□ 1.05
CLN6-206ENST00000565471 ATOH1Q92858 354 aaPredicted RBP21.59■■□□□ 1.05
CLN6-206ENST00000565471 ASB7Q9H672 318 aa21.59■■□□□ 1.05
CLN6-206ENST00000565471 CACNA1HO95180 2353 aa21.59■■□□□ 1.05
CLN6-206ENST00000565471 MYMKA6NI61 221 aa21.58■■□□□ 1.05
CLN6-206ENST00000565471 PI15O43692 258 aa21.58■■□□□ 1.05
CLN6-206ENST00000565471 SEC24AO95486 1093 aa21.58■■□□□ 1.05
CLN6-206ENST00000565471 NASPP49321 788 aaPredicted RBP21.58■■□□□ 1.05
CLN6-206ENST00000565471 ADALQ6DHV7 355 aa21.58■■□□□ 1.05
CLN6-206ENST00000565471 JADE1Q6IE81 842 aa21.58■■□□□ 1.05
CLN6-206ENST00000565471 CCDC105Q8IYK2 499 aa21.58■■□□□ 1.05
CLN6-206ENST00000565471 DNAJC19Q96DA6 116 aa21.58■■□□□ 1.05
CLN6-206ENST00000565471 RPP25Q9BUL9 199 aaKnown RBP21.58■■□□□ 1.05
CLN6-206ENST00000565471 STRA6Q9BX79 667 aa21.58■■□□□ 1.05
CLN6-206ENST00000565471 ARHGEF3Q9NR81 526 aa21.58■■□□□ 1.05
CLN6-206ENST00000565471 FOXD4L1Q9NU39 408 aa21.58■■□□□ 1.05
CLN6-206ENST00000565471 GDE1Q9NZC3 331 aa21.58■■□□□ 1.05
CLN6-206ENST00000565471 CA14Q9ULX7 337 aa21.58■■□□□ 1.05
CLN6-206ENST00000565471 MYH15Q9Y2K3 1946 aa21.57■■□□□ 1.04
CLN6-206ENST00000565471 CPB1P15086 417 aa21.57■■□□□ 1.04
CLN6-206ENST00000565471 TYMPP19971 482 aa21.57■■□□□ 1.04
CLN6-206ENST00000565471 GUCY2FP51841 1108 aa21.57■■□□□ 1.04
CLN6-206ENST00000565471 ADCY1Q08828 1119 aa21.57■■□□□ 1.04
CLN6-206ENST00000565471 TMEM132DQ14C87 1099 aa21.57■■□□□ 1.04
CLN6-206ENST00000565471 SLC5A9Q2M3M2 681 aa21.57■■□□□ 1.04
CLN6-206ENST00000565471 PHLDB3Q6NSJ2 640 aa21.57■■□□□ 1.04
CLN6-206ENST00000565471 DSTYKQ6XUX3 929 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms