RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 KIF12Q96FN5 646 aa17.05■□□□□ 0.32
CDH3-204ENST00000565453 TSPAN18Q96SJ8 248 aa17.05■□□□□ 0.32
CDH3-204ENST00000565453 MFSD1Q9H3U5 465 aa17.05■□□□□ 0.32
CDH3-204ENST00000565453 FOXD4L1Q9NU39 408 aa17.05■□□□□ 0.32
CDH3-204ENST00000565453 WNT16Q9UBV4 365 aa17.05■□□□□ 0.32
CDH3-204ENST00000565453 CCDC39Q9UFE4 941 aa17.05■□□□□ 0.32
CDH3-204ENST00000565453 POLIQ9UNA4 740 aa17.05■□□□□ 0.32
CDH3-204ENST00000565453 STYXL1Q9Y6J8 313 aa17.05■□□□□ 0.32
CDH3-204ENST00000565453 NUMBLQ9Y6R0 609 aa17.05■□□□□ 0.32
CDH3-204ENST00000565453 KRBA1A5PL33 1030 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 MYMKA6NI61 221 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 TISP43B9A030 160 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 STX6O43752 255 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 PPP1R37O75864 691 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 SEC24AO95486 1093 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 CFHP08603 1231 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 ATF2P15336 505 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 GUCY2FP51841 1108 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 CEBPZQ03701 1054 aaKnown RBP17.04■□□□□ 0.32
CDH3-204ENST00000565453 SLC39A14Q15043 492 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 CTXN3Q4LDR2 81 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 RRAGBQ5VZM2 374 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 ZNF280DQ6N043 979 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 PARM1Q6UWI2 310 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 DYMQ7RTS9 669 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 ZNF720Q7Z2F6 126 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 SFR1Q86XK3 245 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 TCEAL8Q8IYN2 117 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 SIX5Q8N196 739 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 KRI1Q8N9T8 703 aaKnown RBP17.04■□□□□ 0.32
CDH3-204ENST00000565453 APPL2Q8NEU8 664 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 FLCNQ8NFG4 579 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 ST13P5Q8NFI4 369 aaPredicted RBP17.04■□□□□ 0.32
CDH3-204ENST00000565453 FGF14Q92915 247 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 DNAJC19Q96DA6 116 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 MSTO1Q9BUK6 570 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 RPP25Q9BUL9 199 aaKnown RBP17.04■□□□□ 0.32
CDH3-204ENST00000565453 STRA6Q9BX79 667 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 ZSCAN16Q9H4T2 348 aaPredicted RBP17.04■□□□□ 0.32
CDH3-204ENST00000565453 RPF1Q9H9Y2 349 aaKnown RBP17.04■□□□□ 0.32
CDH3-204ENST00000565453 AVENQ9NQS1 362 aaPredicted RBP17.04■□□□□ 0.32
CDH3-204ENST00000565453 FBXL21Q9UKT6 434 aa17.04■□□□□ 0.32
CDH3-204ENST00000565453 A0A087X0B3 334 aa17.03■□□□□ 0.32
CDH3-204ENST00000565453 PPEF2O14830 753 aa17.03■□□□□ 0.32
CDH3-204ENST00000565453 PI15O43692 258 aa17.03■□□□□ 0.32
CDH3-204ENST00000565453 AOC1P19801 751 aa17.03■□□□□ 0.32
CDH3-204ENST00000565453 NASPP49321 788 aaPredicted RBP17.03■□□□□ 0.32
CDH3-204ENST00000565453 ARPP19P56211 112 aa17.03■□□□□ 0.32
CDH3-204ENST00000565453 SLC5A9Q2M3M2 681 aa17.03■□□□□ 0.32
CDH3-204ENST00000565453 PABPC1LQ4VXU2 614 aaKnown RBP17.03■□□□□ 0.32
CDH3-204ENST00000565453 SPATA1Q5VX52 437 aa17.03■□□□□ 0.32
CDH3-204ENST00000565453 TPGS2Q68CL5 300 aa17.03■□□□□ 0.32
CDH3-204ENST00000565453 POTEHQ6S545 545 aa17.03■□□□□ 0.32
CDH3-204ENST00000565453 CD302Q8IX05 232 aa17.03■□□□□ 0.32
CDH3-204ENST00000565453 NPAS3Q8IXF0 933 aa17.03■□□□□ 0.32
CDH3-204ENST00000565453 IKZF4Q9H2S9 585 aa17.03■□□□□ 0.32
CDH3-204ENST00000565453 SLC2A4RGQ9NR83 387 aa17.03■□□□□ 0.32
CDH3-204ENST00000565453 KCNH3Q9ULD8 1083 aa17.03■□□□□ 0.32
CDH3-204ENST00000565453 XPOTO43592 962 aaKnown RBP17.02■□□□□ 0.32
CDH3-204ENST00000565453 OAZ2O95190 189 aa17.02■□□□□ 0.32
CDH3-204ENST00000565453 RHOP08100 348 aa17.02■□□□□ 0.32
CDH3-204ENST00000565453 JADE1Q6IE81 842 aa17.02■□□□□ 0.32
CDH3-204ENST00000565453 SV2BQ7L1I2 683 aa17.02■□□□□ 0.32
CDH3-204ENST00000565453 BEST2Q8NFU1 509 aa17.02■□□□□ 0.32
CDH3-204ENST00000565453 GPR152Q8TDT2 470 aa17.02■□□□□ 0.32
CDH3-204ENST00000565453 SNX21Q969T3 373 aa17.02■□□□□ 0.32
CDH3-204ENST00000565453 HVCN1Q96D96 273 aa17.02■□□□□ 0.32
CDH3-204ENST00000565453 CYP4F11Q9HBI6 524 aa17.02■□□□□ 0.32
CDH3-204ENST00000565453 FAM86C1Q9NVL1 165 aa17.02■□□□□ 0.32
CDH3-204ENST00000565453 SEL1LQ9UBV2 794 aa17.02■□□□□ 0.32
CDH3-204ENST00000565453 AFF4Q9UHB7 1163 aaKnown RBP17.02■□□□□ 0.32
CDH3-204ENST00000565453 PIEZO1Q92508 2521 aa17.02■□□□□ 0.31
CDH3-204ENST00000565453 WDFY4Q6ZS81 3184 aa17.01■□□□□ 0.31
CDH3-204ENST00000565453 ANK1P16157 1881 aa17.01■□□□□ 0.31
CDH3-204ENST00000565453 FRMD3A2A2Y4 597 aa17.01■□□□□ 0.31
CDH3-204ENST00000565453 H0Y858 1186 aa17.01■□□□□ 0.31
CDH3-204ENST00000565453 VNN2O95498 520 aa17.01■□□□□ 0.31
CDH3-204ENST00000565453 LRG1P02750 347 aa17.01■□□□□ 0.31
CDH3-204ENST00000565453 NFICP08651 508 aa17.01■□□□□ 0.31
CDH3-204ENST00000565453 ELF1P32519 619 aa17.01■□□□□ 0.31
CDH3-204ENST00000565453 TXLNAP40222 546 aa17.01■□□□□ 0.31
CDH3-204ENST00000565453 ACOT2P49753 483 aa17.01■□□□□ 0.31
CDH3-204ENST00000565453 PRSS36Q5K4E3 855 aa17.01■□□□□ 0.31
CDH3-204ENST00000565453 SLFN12LQ6IEE8 588 aa17.01■□□□□ 0.31
CDH3-204ENST00000565453 CRELD2Q6UXH1 353 aaPredicted RBP17.01■□□□□ 0.31
CDH3-204ENST00000565453 IRF2BPLQ9H1B7 796 aa17.01■□□□□ 0.31
CDH3-204ENST00000565453 CA14Q9ULX7 337 aa17.01■□□□□ 0.31
CDH3-204ENST00000565453 MAFFQ9ULX9 164 aa17.01■□□□□ 0.31
CDH3-204ENST00000565453 DERAQ9Y315 318 aa17.01■□□□□ 0.31
CDH3-204ENST00000565453 TIMM13Q9Y5L4 95 aaPredicted RBP17.01■□□□□ 0.31
CDH3-204ENST00000565453 INSL5Q9Y5Q6 135 aa17.01■□□□□ 0.31
CDH3-204ENST00000565453 MYH15Q9Y2K3 1946 aa17■□□□□ 0.31
CDH3-204ENST00000565453 ANO9A1A5B4 782 aa17■□□□□ 0.31
CDH3-204ENST00000565453 PIRO00625 290 aa17■□□□□ 0.31
CDH3-204ENST00000565453 PRRG1O14668 218 aa17■□□□□ 0.31
CDH3-204ENST00000565453 SPTLC1O15269 473 aa17■□□□□ 0.31
CDH3-204ENST00000565453 GAP43P17677 238 aa17■□□□□ 0.31
CDH3-204ENST00000565453 PTPN2P17706 415 aa17■□□□□ 0.31
CDH3-204ENST00000565453 TYMPP19971 482 aa17■□□□□ 0.31
CDH3-204ENST00000565453 ADSSP30520 456 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms