RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 IL2RBP14784 551 aa5.65□□□□□ -1.5
CHD9-215ENST00000565442 HK3P52790 923 aa5.65□□□□□ -1.5
CHD9-215ENST00000565442 ATP8B2P98198 1209 aa5.65□□□□□ -1.5
CHD9-215ENST00000565442 MTM1Q13496 603 aa5.65□□□□□ -1.5
CHD9-215ENST00000565442 ELAVL1Q15717 326 aaKnown RBP5.65□□□□□ -1.5
CHD9-215ENST00000565442 FAM214AQ32MH5 1076 aa5.65□□□□□ -1.5
CHD9-215ENST00000565442 AFMIDQ63HM1 303 aa5.65□□□□□ -1.5
CHD9-215ENST00000565442 NPNTQ6UXI9 565 aa5.65□□□□□ -1.5
CHD9-215ENST00000565442 CCDC149Q6ZUS6 474 aa5.65□□□□□ -1.5
CHD9-215ENST00000565442 PDZD4Q76G19 769 aaPredicted RBP5.65□□□□□ -1.5
CHD9-215ENST00000565442 CHST15Q7LFX5 561 aaPredicted RBP5.65□□□□□ -1.5
CHD9-215ENST00000565442 ZNF572Q7Z3I7 529 aaPredicted RBP5.65□□□□□ -1.5
CHD9-215ENST00000565442 DAAM2Q86T65 1068 aa5.65□□□□□ -1.5
CHD9-215ENST00000565442 ADGRG3Q86Y34 549 aa5.65□□□□□ -1.5
CHD9-215ENST00000565442 ZNF276Q8N554 614 aa5.65□□□□□ -1.5
CHD9-215ENST00000565442 SH2D3CQ8N5H7 860 aa5.65□□□□□ -1.5
CHD9-215ENST00000565442 KLHDC4Q8TBB5 520 aa5.65□□□□□ -1.5
CHD9-215ENST00000565442 IL17RAQ96F46 866 aa5.65□□□□□ -1.5
CHD9-215ENST00000565442 TCF25Q9BQ70 676 aa5.65□□□□□ -1.5
CHD9-215ENST00000565442 POLHQ9Y253 713 aa5.65□□□□□ -1.5
CHD9-215ENST00000565442 GRID2IPA4D2P6 1211 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 FAM227AF5H4B4 570 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 ALOX15P16050 662 aaPredicted RBP5.64□□□□□ -1.51
CHD9-215ENST00000565442 ZNF37AP17032 561 aaPredicted RBP5.64□□□□□ -1.51
CHD9-215ENST00000565442 MALP21145 153 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 CD38P28907 300 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 ALDH1A3P47895 512 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 TLE1Q04724 770 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 MRPL49Q13405 166 aaKnown RBP5.64□□□□□ -1.51
CHD9-215ENST00000565442 RAB39AQ14964 217 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 PTPAQ15257 358 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 COBLL1Q53SF7 1204 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 RABL3Q5HYI8 236 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 LY6G5CQ5SRR4 150 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 CYB5RLQ6IPT4 315 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 HEATR3Q7Z4Q2 680 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 COL23A1Q86Y22 540 aaPredicted RBP5.64□□□□□ -1.51
CHD9-215ENST00000565442 FAM156AQ8NDB6 213 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 PLBD2Q8NHP8 589 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 PROKR1Q8TCW9 393 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 CDK5RAP3Q96JB5 506 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 NT5C1BQ96P26 610 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 MYOCQ99972 504 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 SARGQ9BW04 601 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 TMEM60Q9H2L4 133 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 MOCS1Q9NZB8 636 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 CALCOCO1Q9P1Z2 691 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 ABCF2Q9UG63 623 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 ATRNL1Q5VV63 1379 aa5.64□□□□□ -1.51
CHD9-215ENST00000565442 KLRG2A4D1S0 409 aaPredicted RBP5.63□□□□□ -1.51
CHD9-215ENST00000565442 H3BUI4 141 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 INO80B-WBP1J3KQ70 363 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 HOXA3O43365 443 aaPredicted RBP5.63□□□□□ -1.51
CHD9-215ENST00000565442 ERBB2P04626 1255 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 TRIM27P14373 513 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 RHCEP18577 417 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 SMARCA1P28370 1054 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 RABGGTBP53611 331 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 RHDQ02161 417 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 SP140Q13342 867 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 SNAPC2Q13487 334 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 KIAA0753Q2KHM9 967 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 ANO6Q4KMQ2 910 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 FAM47AQ5JRC9 791 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 ANKS6Q68DC2 871 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 FAM111BQ6SJ93 734 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 SRGAP1Q7Z6B7 1085 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 XYLT1Q86Y38 959 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 SLC35B2Q8TB61 432 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 CASKIN2Q8WXE0 1202 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 TTC17Q96AE7 1141 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 INO80BQ9C086 356 aaPredicted RBP5.63□□□□□ -1.51
CHD9-215ENST00000565442 LMBRD1Q9NUN5 540 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 STAP2Q9UGK3 403 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 FZD1Q9UP38 647 aa5.63□□□□□ -1.51
CHD9-215ENST00000565442 CAPN8A6NHC0 703 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 APAF1O14727 1248 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 PLIN1O60240 522 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 ABHD16AO95870 558 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 ZBED1O96006 694 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 ITGB1P05556 798 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 FLT3LGP49771 235 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 AGFG1P52594 562 aaKnown RBP5.62□□□□□ -1.51
CHD9-215ENST00000565442 CTXN1P60606 82 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 RAB1AP62820 205 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 NKX6-1P78426 367 aaPredicted RBP5.62□□□□□ -1.51
CHD9-215ENST00000565442 PLS1Q14651 629 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 FKBP15Q5T1M5 1219 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 STRIP1Q5VSL9 837 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 BHLHA9Q7RTU4 235 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 KIAA0319LQ8IZA0 1049 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 DCBLD1Q8N8Z6 715 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 PJA1Q8NG27 643 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 SLC35A4Q96G79 324 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 ZNF512Q96ME7 567 aaPredicted RBP5.62□□□□□ -1.51
CHD9-215ENST00000565442 MRI1Q9BV20 369 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 PCGF6Q9BYE7 350 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 KCNH6Q9H252 994 aa5.62□□□□□ -1.51
CHD9-215ENST00000565442 DDX21Q9NR30 783 aaKnown RBP eCLIP5.62□□□□□ -1.51
CHD9-215ENST00000565442 CHST12Q9NRB3 414 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms