RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 CEP112Q8N8E3 955 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 TC2NQ8N9U0 490 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 C3orf20Q8ND61 904 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 EZH1Q92800 747 aaPredicted RBP5.55□□□□□ -1.52
CAPN3-214ENST00000565274 WNT8BQ93098 351 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 DHX58Q96C10 678 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 SYTL4Q96C24 671 aaPredicted RBP5.55□□□□□ -1.52
CAPN3-214ENST00000565274 HIC2Q96JB3 615 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 CNDP1Q96KN2 507 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 CTAGE1Q96RT6 745 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 WDR24Q96S15 920 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 PHF20Q9BVI0 1012 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 RTFDC1Q9BY42 306 aaPredicted RBP5.55□□□□□ -1.52
CAPN3-214ENST00000565274 PARD6BQ9BYG5 372 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 GBP3Q9H0R5 595 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 NRDE2Q9H7Z3 1164 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 GJB4Q9NTQ9 266 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 TUBA8Q9NY65 449 aaPredicted RBP5.55□□□□□ -1.52
CAPN3-214ENST00000565274 SNTG2Q9NY99 539 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 MAN1B1Q9UKM7 699 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 AGO2Q9UKV8 859 aaKnown RBP5.55□□□□□ -1.52
CAPN3-214ENST00000565274 HIF3AQ9Y2N7 669 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 AFG3L2Q9Y4W6 797 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 TIMM22Q9Y584 194 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 ANKRD36CQ5JPF3 1778 aa5.55□□□□□ -1.52
CAPN3-214ENST00000565274 ITIH6Q6UXX5 1313 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 PLCH1Q4KWH8 1693 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 SYNJ2BP-COX16A0A087WUM0 186 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 CYP2D7A0A087X1C5 515 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 C17orf113A0A1B0GUU1 675 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 ERICH2A1L162 156 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 TRIM75PA6NK02 468 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 PDLIM1O00151 329 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 TTI1O43156 1089 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 HOXC11O43248 304 aaPredicted RBP5.54□□□□□ -1.52
CAPN3-214ENST00000565274 TOM1O60784 492 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 DIAPH2O60879 1101 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 ATP6V1G1O75348 118 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 KATNA1O75449 491 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 DDAH1O94760 285 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 CAMTA2O94983 1202 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 MBD4O95243 580 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 NTSR2O95665 410 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 CAPNS1P04632 268 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 PGRP06401 933 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 PCNAP12004 261 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 MUTP22033 750 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 NF2P35240 595 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 KRT20P35900 424 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 STAT3P40763 770 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 NR2C2P49116 596 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 LMAN1P49257 510 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 CHMP4BP1P59074 171 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 ARPC4P59998 168 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 PURAQ00577 322 aaKnown RBP5.54□□□□□ -1.52
CAPN3-214ENST00000565274 CD83Q01151 205 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 GBE1Q04446 702 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 PPARAQ07869 468 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 C19orf57Q0VDD7 668 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 TROAPQ12815 778 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 PNOCQ13519 176 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 DPYSQ14117 519 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 BTG3Q14201 252 aaPredicted RBP5.54□□□□□ -1.52
CAPN3-214ENST00000565274 MLC1Q15049 377 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 KRT71Q3SY84 523 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 SBK1Q52WX2 424 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 BEND6Q5SZJ8 279 aaPredicted RBP5.54□□□□□ -1.52
CAPN3-214ENST00000565274 GPATCH4Q5T3I0 446 aaKnown RBP5.54□□□□□ -1.52
CAPN3-214ENST00000565274 INTS11Q5TA45 600 aaKnown RBP5.54□□□□□ -1.52
CAPN3-214ENST00000565274 SUSD4Q5VX71 490 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 ARL6IP4Q66PJ3 421 aaKnown RBP5.54□□□□□ -1.52
CAPN3-214ENST00000565274 POMZP3Q6PJE2 187 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 TOGARAM2Q6ZUX3 1019 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 HDXQ7Z353 690 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 LRRTM3Q86VH5 581 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 OSTM1Q86WC4 334 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 ZNF654Q8IZM8 581 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 SYNE4Q8N205 404 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 MAGEB6Q8N7X4 407 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 ZNF540Q8NDQ6 660 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 IPMKQ8NFU5 416 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 RASSF8Q8NHQ8 419 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 FAM71BQ8TC56 605 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 CCDC12Q8WUD4 166 aaPredicted RBP5.54□□□□□ -1.52
CAPN3-214ENST00000565274 EDEM1Q92611 657 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 ESR2Q92731 530 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 DPF3Q92784 378 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 PHKBQ93100 1093 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 CCDC114Q96M63 670 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 AIFM3Q96NN9 605 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 CLIC6Q96NY7 704 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 MED15Q96RN5 788 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 RIOK1Q9BRS2 568 aaKnown RBP5.54□□□□□ -1.52
CAPN3-214ENST00000565274 SLC26A6Q9BXS9 759 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 KIAA1586Q9HCI6 787 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 NLRC4Q9NPP4 1024 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 RASSF1Q9NS23 344 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 CCDC87Q9NVE4 849 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 DZANK1Q9NVP4 752 aa5.54□□□□□ -1.52
CAPN3-214ENST00000565274 IL1RAPL1Q9NZN1 696 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms