RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ITFG1Q8TB96 612 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 GPR152Q8TDT2 470 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 DDX12PQ92771 950 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 BORCS6Q96GS4 357 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 REEP2Q9BRK0 252 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 SEMA4AQ9H3S1 761 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 ST6GALNAC4Q9H4F1 302 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 TBC1D17Q9HA65 648 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 ARHGEF3Q9NR81 526 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 CCDC39Q9UFE4 941 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 FBXL5Q9UKA1 691 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 MRPS23Q9Y3D9 190 aaKnown RBP13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 SIT1Q9Y3P8 196 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 DOCK6Q96HP0 2047 aa13.27□□□□□ -0.29
GTF3C1-204ENST00000564664 A0A0B4J269 797 aa13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 WDR27A2RRH5 827 aa13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 HNRNPDLO14979 420 aaKnown RBP13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 MEFVO15553 781 aaPredicted RBP13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 ECI2O75521 394 aa13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 RHOP08100 348 aa13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 GPC5P78333 572 aa13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 GTF2BQ00403 316 aa13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 PRKCQQ04759 706 aa13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 PPP2R3AQ06190 1150 aa13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 KRI1Q8N9T8 703 aaKnown RBP13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 LARP4BQ92615 738 aaKnown RBP13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 FGF14Q92915 247 aa13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 KIF12Q96FN5 646 aa13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 OSBPL6Q9BZF3 934 aa13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 RPF1Q9H9Y2 349 aaKnown RBP13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 CYP4F11Q9HBI6 524 aa13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 FAM86C1Q9NVL1 165 aa13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 CA14Q9ULX7 337 aa13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 DERAQ9Y315 318 aa13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 MORC2Q9Y6X9 1032 aaPredicted RBP13.26□□□□□ -0.29
GTF3C1-204ENST00000564664 RIF1Q5UIP0 2472 aaKnown RBP13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 OR6C75A6NL08 312 aa13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 LACTBL1A8MY62 500 aa13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 K7ENM7 598 aa13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 TBCAO75347 108 aaKnown RBP13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 CXCL8P10145 99 aa13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 PLCG1P19174 1290 aa13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 AARSP49588 968 aaKnown RBP eCLIP13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 YWHAHQ04917 246 aaPredicted RBP13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 MCM6Q14566 821 aa13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 KARSQ15046 597 aaKnown RBP13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 ANGPT1Q15389 498 aa13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 SLC44A4Q53GD3 710 aa13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 CYP4A22Q5TCH4 519 aa13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 IQCEQ6IPM2 695 aa13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 NPAS3Q8IXF0 933 aa13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 ELSPBP1Q96BH3 223 aa13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 INTS4Q96HW7 963 aaKnown RBP13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 ZNF512Q96ME7 567 aaPredicted RBP13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 NELL2Q99435 816 aa13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 RPP25Q9BUL9 199 aaKnown RBP13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 HAPLN2Q9GZV7 340 aa13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 ASB7Q9H672 318 aa13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 HCFC1R1Q9NWW0 138 aa13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 STK17AQ9UEE5 414 aa13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 SRPRBQ9Y5M8 271 aaKnown RBP13.25□□□□□ -0.29
GTF3C1-204ENST00000564664 FAM189A1O60320 539 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 TYMPP19971 482 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 MAGEA9P43362 315 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 ARPP19P56211 112 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 CACNB1Q02641 598 aaPredicted RBP13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 ADCY1Q08828 1119 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 PLD1Q13393 1074 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 MYBPC2Q14324 1141 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 DHX8Q14562 1220 aaKnown RBP13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 POSTNQ15063 836 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 ENOX2Q16206 610 aaKnown RBP13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 SEZ6Q53EL9 994 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 SPATA1Q5VX52 437 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 USP37Q86T82 979 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 MAP4K3Q8IVH8 894 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 BEST2Q8NFU1 509 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 NKD2Q969F2 451 aaPredicted RBP13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 HVCN1Q96D96 273 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 FIZ1Q96SL8 496 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 MSTO1Q9BUK6 570 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 DDX23Q9BUQ8 820 aaKnown RBP13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 GPR88Q9GZN0 384 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 HSFX1Q9UBD0 423 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 SEL1LQ9UBV2 794 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 TUBGCP4Q9UGJ1 667 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 CPSF3Q9UKF6 684 aaKnown RBP13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 INSL5Q9Y5Q6 135 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 STYXL1Q9Y6J8 313 aa13.24□□□□□ -0.29
GTF3C1-204ENST00000564664 NOTCH4Q99466 2003 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 KANSL1LA0AUZ9 987 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 VPS37CA5D8V6 355 aaPredicted RBP13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 SEC24AO95486 1093 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 TXLNAP40222 546 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 TNFSF9P41273 254 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 EPHA5P54756 1037 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 LILRA4P59901 499 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 GPR17Q13304 367 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 PTPAQ15257 358 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 MLF2Q15773 248 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms