RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 NSUN6Q8TEA1 469 aaKnown RBP6.36□□□□□ -1.39
UBR1-205ENST00000564540 TLR10Q9BXR5 811 aa6.36□□□□□ -1.39
UBR1-205ENST00000564540 KCNE5Q9UJ90 142 aa6.36□□□□□ -1.39
UBR1-205ENST00000564540 SLC45A2Q9UMX9 530 aa6.36□□□□□ -1.39
UBR1-205ENST00000564540 MTO1Q9Y2Z2 717 aaKnown RBP6.36□□□□□ -1.39
UBR1-205ENST00000564540 LUC7L2Q9Y383 392 aaKnown RBP6.36□□□□□ -1.39
UBR1-205ENST00000564540 SPEF1Q9Y4P9 236 aa6.36□□□□□ -1.39
UBR1-205ENST00000564540 EPN1Q9Y6I3 576 aaPredicted RBP6.36□□□□□ -1.39
UBR1-205ENST00000564540 ERN1O75460 977 aaKnown RBP6.35□□□□□ -1.39
UBR1-205ENST00000564540 SNUPNO95149 360 aaKnown RBP6.35□□□□□ -1.39
UBR1-205ENST00000564540 MTHFD1P11586 935 aaKnown RBP6.35□□□□□ -1.39
UBR1-205ENST00000564540 INHBEP58166 350 aa6.35□□□□□ -1.39
UBR1-205ENST00000564540 CYP2A13Q16696 494 aa6.35□□□□□ -1.39
UBR1-205ENST00000564540 ABHD17BQ5VST6 288 aa6.35□□□□□ -1.39
UBR1-205ENST00000564540 PPP4R3AQ6IN85 833 aa6.35□□□□□ -1.39
UBR1-205ENST00000564540 ARMC6Q6NXE6 501 aa6.35□□□□□ -1.39
UBR1-205ENST00000564540 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.35□□□□□ -1.39
UBR1-205ENST00000564540 IL17RDQ8NFM7 739 aa6.35□□□□□ -1.39
UBR1-205ENST00000564540 PNKPQ96T60 521 aa6.35□□□□□ -1.39
UBR1-205ENST00000564540 TOR3AQ9H497 397 aa6.35□□□□□ -1.39
UBR1-205ENST00000564540 VSX1Q9NZR4 365 aaPredicted RBP6.35□□□□□ -1.39
UBR1-205ENST00000564540 CFAP20Q9Y6A4 193 aaKnown RBP6.35□□□□□ -1.39
UBR1-205ENST00000564540 PURAQ00577 322 aaKnown RBP6.34□□□□□ -1.39
UBR1-205ENST00000564540 TAP1Q03518 808 aa6.34□□□□□ -1.39
UBR1-205ENST00000564540 FOXI1Q12951 378 aa6.34□□□□□ -1.39
UBR1-205ENST00000564540 SMN1Q16637 294 aaKnown RBP6.34□□□□□ -1.39
UBR1-205ENST00000564540 KHDC1Q4VXA5 237 aaKnown RBP6.34□□□□□ -1.39
UBR1-205ENST00000564540 FAM43AQ8N2R8 423 aa6.34□□□□□ -1.39
UBR1-205ENST00000564540 SLC44A3Q8N4M1 653 aa6.34□□□□□ -1.39
UBR1-205ENST00000564540 SUPT20HQ8NEM7 779 aa6.34□□□□□ -1.39
UBR1-205ENST00000564540 LINC00476Q8WZB0 136 aa6.34□□□□□ -1.39
UBR1-205ENST00000564540 CAVIN3Q969G5 261 aa6.34□□□□□ -1.39
UBR1-205ENST00000564540 BOD1Q96IK1 185 aa6.34□□□□□ -1.39
UBR1-205ENST00000564540 PACSIN1Q9BY11 444 aa6.34□□□□□ -1.39
UBR1-205ENST00000564540 WDR26Q9H7D7 661 aa6.34□□□□□ -1.39
UBR1-205ENST00000564540 GALNT9Q9HCQ5 603 aa6.34□□□□□ -1.39
UBR1-205ENST00000564540 TMEM74BQ9NUR3 256 aa6.34□□□□□ -1.39
UBR1-205ENST00000564540 JKAMPQ9P055 326 aa6.34□□□□□ -1.39
UBR1-205ENST00000564540 CALCOCO1Q9P1Z2 691 aa6.34□□□□□ -1.39
UBR1-205ENST00000564540 TESQ9UGI8 421 aaKnown RBP6.34□□□□□ -1.39
UBR1-205ENST00000564540 CDYLQ9Y232 598 aa6.34□□□□□ -1.39
UBR1-205ENST00000564540 hCG_2014768A0A024R1R8 64 aa6.33□□□□□ -1.4
UBR1-205ENST00000564540 SLC43A1O75387 559 aa6.33□□□□□ -1.4
UBR1-205ENST00000564540 RHOBTB3O94955 611 aa6.33□□□□□ -1.4
UBR1-205ENST00000564540 HKR1P10072 659 aa6.33□□□□□ -1.4
UBR1-205ENST00000564540 MALP21145 153 aa6.33□□□□□ -1.4
UBR1-205ENST00000564540 TGM1P22735 817 aa6.33□□□□□ -1.4
UBR1-205ENST00000564540 FXR1P51114 621 aaKnown RBP eCLIP6.33□□□□□ -1.4
UBR1-205ENST00000564540 SEC24CP53992 1094 aa6.33□□□□□ -1.4
UBR1-205ENST00000564540 EXOSC10Q01780 885 aaKnown RBP6.33□□□□□ -1.4
UBR1-205ENST00000564540 SNAPC2Q13487 334 aa6.33□□□□□ -1.4
UBR1-205ENST00000564540 GEN1Q17RS7 908 aa6.33□□□□□ -1.4
UBR1-205ENST00000564540 TTC7BQ86TV6 843 aa6.33□□□□□ -1.4
UBR1-205ENST00000564540 ZBTB46Q86UZ6 589 aa6.33□□□□□ -1.4
UBR1-205ENST00000564540 CPA6Q8N4T0 437 aa6.33□□□□□ -1.4
UBR1-205ENST00000564540 TMIEQ8NEW7 156 aa6.33□□□□□ -1.4
UBR1-205ENST00000564540 CHMP4CQ96CF2 233 aa6.33□□□□□ -1.4
UBR1-205ENST00000564540 Q96MF0 132 aa6.33□□□□□ -1.4
UBR1-205ENST00000564540 KLHL32Q96NJ5 620 aa6.33□□□□□ -1.4
UBR1-205ENST00000564540 UNKLQ9H9P5 680 aaKnown RBP6.33□□□□□ -1.4
UBR1-205ENST00000564540 PDCP20941 246 aa6.32□□□□□ -1.4
UBR1-205ENST00000564540 BMP5P22003 454 aa6.32□□□□□ -1.4
UBR1-205ENST00000564540 FDXRP22570 491 aa6.32□□□□□ -1.4
UBR1-205ENST00000564540 PLA2G5P39877 138 aa6.32□□□□□ -1.4
UBR1-205ENST00000564540 AVPR1BP47901 424 aa6.32□□□□□ -1.4
UBR1-205ENST00000564540 VAV2P52735 878 aa6.32□□□□□ -1.4
UBR1-205ENST00000564540 ZNF365Q70YC5 407 aa6.32□□□□□ -1.4
UBR1-205ENST00000564540 CATIPQ7Z7H3 387 aa6.32□□□□□ -1.4
UBR1-205ENST00000564540 Q8NA96 180 aa6.32□□□□□ -1.4
UBR1-205ENST00000564540 NSUN7Q8NE18 718 aaKnown RBP6.32□□□□□ -1.4
UBR1-205ENST00000564540 STAG1Q8WVM7 1258 aa6.32□□□□□ -1.4
UBR1-205ENST00000564540 FUBP1Q96AE4 644 aaKnown RBP6.32□□□□□ -1.4
UBR1-205ENST00000564540 ZG16BQ96DA0 208 aa6.32□□□□□ -1.4
UBR1-205ENST00000564540 COQ10AQ96MF6 247 aa6.32□□□□□ -1.4
UBR1-205ENST00000564540 NT5C1B-RDH14C9J2C7 533 aa6.31□□□□□ -1.4
UBR1-205ENST00000564540 F2RL2O00254 374 aa6.31□□□□□ -1.4
UBR1-205ENST00000564540 IL33O95760 270 aa6.31□□□□□ -1.4
UBR1-205ENST00000564540 RPLP2P05387 115 aaKnown RBP6.31□□□□□ -1.4
UBR1-205ENST00000564540 NEK2P51955 445 aa6.31□□□□□ -1.4
UBR1-205ENST00000564540 ANAPC15P60006 121 aa6.31□□□□□ -1.4
UBR1-205ENST00000564540 TMEM240Q5SV17 173 aa6.31□□□□□ -1.4
UBR1-205ENST00000564540 SLC4A10Q6U841 1118 aa6.31□□□□□ -1.4
UBR1-205ENST00000564540 OLFML1Q6UWY5 402 aa6.31□□□□□ -1.4
UBR1-205ENST00000564540 HOOK2Q96ED9 719 aa6.31□□□□□ -1.4
UBR1-205ENST00000564540 HSPBAP1Q96EW2 488 aa6.31□□□□□ -1.4
UBR1-205ENST00000564540 PTCD3Q96EY7 689 aaKnown RBP6.31□□□□□ -1.4
UBR1-205ENST00000564540 MED15Q96RN5 788 aa6.31□□□□□ -1.4
UBR1-205ENST00000564540 IMPG2Q9BZV3 1241 aa6.31□□□□□ -1.4
UBR1-205ENST00000564540 TBCCD1Q9NVR7 557 aa6.31□□□□□ -1.4
UBR1-205ENST00000564540 PCDHA3Q9Y5H8 950 aa6.31□□□□□ -1.4
UBR1-205ENST00000564540 SALL3Q9BXA9 1300 aa6.3□□□□□ -1.4
UBR1-205ENST00000564540 LOC105371045A0A1W2PR82 267 aa6.3□□□□□ -1.4
UBR1-205ENST00000564540 MYADML2A6NDP7 307 aa6.3□□□□□ -1.4
UBR1-205ENST00000564540 LMNAP02545 664 aaKnown RBP6.3□□□□□ -1.4
UBR1-205ENST00000564540 TYRP1P17643 537 aa6.3□□□□□ -1.4
UBR1-205ENST00000564540 MPLP40238 635 aa6.3□□□□□ -1.4
UBR1-205ENST00000564540 BLOC1S1P78537 153 aa6.3□□□□□ -1.4
UBR1-205ENST00000564540 USP45Q70EL2 814 aa6.3□□□□□ -1.4
UBR1-205ENST00000564540 PRR18Q8N4B5 295 aa6.3□□□□□ -1.4
UBR1-205ENST00000564540 PDPRQ8NCN5 879 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms