RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 CXorf38Q8TB03 319 aa18.75■□□□□ 0.59
USB1-209ENST00000564387 RIN2Q8WYP3 895 aaPredicted RBP18.75■□□□□ 0.59
USB1-209ENST00000564387 FAM212AQ96EL1 285 aa18.75■□□□□ 0.59
USB1-209ENST00000564387 GTPBP4Q9BZE4 634 aaKnown RBP18.75■□□□□ 0.59
USB1-209ENST00000564387 VCANP13611 3396 aa18.74■□□□□ 0.59
USB1-209ENST00000564387 TBC1D4O60343 1298 aa18.74■□□□□ 0.59
USB1-209ENST00000564387 SMC2O95347 1197 aa18.74■□□□□ 0.59
USB1-209ENST00000564387 PAPLNO95428 1278 aa18.74■□□□□ 0.59
USB1-209ENST00000564387 GUCY2FP51841 1108 aa18.74■□□□□ 0.59
USB1-209ENST00000564387 SURF1Q15526 300 aa18.74■□□□□ 0.59
USB1-209ENST00000564387 SNRNP35Q16560 246 aaKnown RBP18.74■□□□□ 0.59
USB1-209ENST00000564387 PUS10Q3MIT2 529 aaKnown RBP18.74■□□□□ 0.59
USB1-209ENST00000564387 ZCWPW2Q504Y3 356 aa18.74■□□□□ 0.59
USB1-209ENST00000564387 TJAP1Q5JTD0 557 aa18.74■□□□□ 0.59
USB1-209ENST00000564387 ZNF658Q5TYW1 1059 aaPredicted RBP18.74■□□□□ 0.59
USB1-209ENST00000564387 LILRA6Q6PI73 481 aa18.74■□□□□ 0.59
USB1-209ENST00000564387 CASP10Q92851 521 aa18.74■□□□□ 0.59
USB1-209ENST00000564387 MFSD14AQ96MC6 490 aa18.74■□□□□ 0.59
USB1-209ENST00000564387 GZF1Q9H116 711 aaPredicted RBP18.74■□□□□ 0.59
USB1-209ENST00000564387 PDE11AQ9HCR9 933 aa18.74■□□□□ 0.59
USB1-209ENST00000564387 DPP3Q9NY33 737 aa18.74■□□□□ 0.59
USB1-209ENST00000564387 GRXCR2A6NFK2 248 aa18.73■□□□□ 0.59
USB1-209ENST00000564387 H3BQ06 376 aaPredicted RBP18.73■□□□□ 0.59
USB1-209ENST00000564387 C2CD2LO14523 706 aa18.73■□□□□ 0.59
USB1-209ENST00000564387 PPEF2O14830 753 aa18.73■□□□□ 0.59
USB1-209ENST00000564387 ADH1AP07327 375 aa18.73■□□□□ 0.59
USB1-209ENST00000564387 HOXB8P17481 243 aaPredicted RBP18.73■□□□□ 0.59
USB1-209ENST00000564387 TKTP29401 623 aaKnown RBP18.73■□□□□ 0.59
USB1-209ENST00000564387 NDUFV1P49821 464 aa18.73■□□□□ 0.59
USB1-209ENST00000564387 KCNQ1P51787 676 aa18.73■□□□□ 0.59
USB1-209ENST00000564387 LILRA4P59901 499 aa18.73■□□□□ 0.59
USB1-209ENST00000564387 MCCD1P59942 119 aaPredicted RBP18.73■□□□□ 0.59
USB1-209ENST00000564387 PSMD6Q15008 389 aa18.73■□□□□ 0.59
USB1-209ENST00000564387 ANKRD54Q6NXT1 300 aa18.73■□□□□ 0.59
USB1-209ENST00000564387 SYCE2Q6PIF2 218 aa18.73■□□□□ 0.59
USB1-209ENST00000564387 PRSS55Q6UWB4 352 aaPredicted RBP18.73■□□□□ 0.59
USB1-209ENST00000564387 SMRP1Q8NCR6 262 aa18.73■□□□□ 0.59
USB1-209ENST00000564387 SMARCE1Q969G3 411 aa18.73■□□□□ 0.59
USB1-209ENST00000564387 CLSTN3Q9BQT9 956 aa18.73■□□□□ 0.59
USB1-209ENST00000564387 S1PR5Q9H228 398 aa18.73■□□□□ 0.59
USB1-209ENST00000564387 MTRRQ9UBK8 725 aa18.73■□□□□ 0.59
USB1-209ENST00000564387 BARX2Q9UMQ3 279 aaPredicted RBP18.73■□□□□ 0.59
USB1-209ENST00000564387 BACE2Q9Y5Z0 518 aa18.73■□□□□ 0.59
USB1-209ENST00000564387 I3L4J1 428 aa18.72■□□□□ 0.59
USB1-209ENST00000564387 SRGAP2BP0DMP2 458 aa18.72■□□□□ 0.59
USB1-209ENST00000564387 KLRC2P26717 231 aa18.72■□□□□ 0.59
USB1-209ENST00000564387 CYP2J2P51589 502 aa18.72■□□□□ 0.59
USB1-209ENST00000564387 CLDN10P78369 228 aa18.72■□□□□ 0.59
USB1-209ENST00000564387 CYP24A1Q07973 514 aa18.72■□□□□ 0.59
USB1-209ENST00000564387 PSMD5Q16401 504 aa18.72■□□□□ 0.59
USB1-209ENST00000564387 ANKS3Q6ZW76 656 aa18.72■□□□□ 0.59
USB1-209ENST00000564387 C1orf127Q8N9H9 656 aa18.72■□□□□ 0.59
USB1-209ENST00000564387 HDAC7Q8WUI4 952 aa18.72■□□□□ 0.59
USB1-209ENST00000564387 CACTINQ8WUQ7 758 aaKnown RBP18.72■□□□□ 0.59
USB1-209ENST00000564387 ERCC4Q92889 916 aaPredicted RBP18.72■□□□□ 0.59
USB1-209ENST00000564387 BORCS6Q96GS4 357 aa18.72■□□□□ 0.59
USB1-209ENST00000564387 INTS13Q9NVM9 706 aa18.72■□□□□ 0.59
USB1-209ENST00000564387 CD207Q9UJ71 328 aa18.72■□□□□ 0.59
USB1-209ENST00000564387 PCDHB8Q9UN66 801 aa18.72■□□□□ 0.59
USB1-209ENST00000564387 NUB1Q9Y5A7 615 aa18.72■□□□□ 0.59
USB1-209ENST00000564387 PTPRJQ12913 1337 aa18.72■□□□□ 0.59
USB1-209ENST00000564387 MAPK13O15264 365 aa18.71■□□□□ 0.59
USB1-209ENST00000564387 SPTLC1O15269 473 aa18.71■□□□□ 0.59
USB1-209ENST00000564387 MBTPS2O43462 519 aa18.71■□□□□ 0.59
USB1-209ENST00000564387 EXOC3O60645 756 aa18.71■□□□□ 0.59
USB1-209ENST00000564387 NR3C1P04150 777 aa18.71■□□□□ 0.59
USB1-209ENST00000564387 EPCAMP16422 314 aa18.71■□□□□ 0.59
USB1-209ENST00000564387 MCM4P33991 863 aa18.71■□□□□ 0.59
USB1-209ENST00000564387 PRCPP42785 496 aa18.71■□□□□ 0.59
USB1-209ENST00000564387 CENPPQ6IPU0 288 aa18.71■□□□□ 0.59
USB1-209ENST00000564387 SLC8B1Q6J4K2 584 aa18.71■□□□□ 0.59
USB1-209ENST00000564387 CEP57Q86XR8 500 aa18.71■□□□□ 0.59
USB1-209ENST00000564387 WDR49Q8IV35 697 aa18.71■□□□□ 0.59
USB1-209ENST00000564387 SUSD6Q92537 303 aa18.71■□□□□ 0.59
USB1-209ENST00000564387 LMBRD1Q9NUN5 540 aa18.71■□□□□ 0.59
USB1-209ENST00000564387 DZANK1Q9NVP4 752 aa18.71■□□□□ 0.59
USB1-209ENST00000564387 MAPK8IP1Q9UQF2 711 aa18.71■□□□□ 0.59
USB1-209ENST00000564387 SCN1AP35498 2009 aa18.71■□□□□ 0.59
USB1-209ENST00000564387 CALUO43852 315 aaPredicted RBP18.7■□□□□ 0.58
USB1-209ENST00000564387 OAZ2O95190 189 aa18.7■□□□□ 0.58
USB1-209ENST00000564387 BMP6P22004 513 aa18.7■□□□□ 0.58
USB1-209ENST00000564387 CA8P35219 290 aa18.7■□□□□ 0.58
USB1-209ENST00000564387 PLXNA3P51805 1871 aa18.7■□□□□ 0.58
USB1-209ENST00000564387 TFAMQ00059 246 aaKnown RBP18.7■□□□□ 0.58
USB1-209ENST00000564387 SMAD4Q13485 552 aaKnown RBP18.7■□□□□ 0.58
USB1-209ENST00000564387 RAB33AQ14088 237 aa18.7■□□□□ 0.58
USB1-209ENST00000564387 EDRF1Q3B7T1 1238 aa18.7■□□□□ 0.58
USB1-209ENST00000564387 VARS2Q5ST30 1063 aaKnown RBP18.7■□□□□ 0.58
USB1-209ENST00000564387 PTCRAQ6ISU1 281 aaPredicted RBP18.7■□□□□ 0.58
USB1-209ENST00000564387 LLGL2Q6P1M3 1020 aa18.7■□□□□ 0.58
USB1-209ENST00000564387 RSPO2Q6UXX9 243 aaPredicted RBP18.7■□□□□ 0.58
USB1-209ENST00000564387 EP400NLQ6ZTU2 488 aa18.7■□□□□ 0.58
USB1-209ENST00000564387 SMYD4Q8IYR2 804 aaPredicted RBP18.7■□□□□ 0.58
USB1-209ENST00000564387 ADSSL1Q8N142 457 aa18.7■□□□□ 0.58
USB1-209ENST00000564387 RDH13Q8NBN7 331 aa18.7■□□□□ 0.58
USB1-209ENST00000564387 APPL2Q8NEU8 664 aa18.7■□□□□ 0.58
USB1-209ENST00000564387 SIX4Q9UIU6 781 aa18.7■□□□□ 0.58
USB1-209ENST00000564387 MAN1B1Q9UKM7 699 aa18.7■□□□□ 0.58
USB1-209ENST00000564387 ITGA11Q9UKX5 1188 aa18.7■□□□□ 0.58
USB1-209ENST00000564387 ADAM12O43184 909 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms