RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 ERCC5P28715 1186 aaPredicted RBP18.03■□□□□ 0.48
RNF40-206ENST00000564260 GTF2H1P32780 548 aa18.03■□□□□ 0.48
RNF40-206ENST00000564260 ERVFC1P60507 584 aa18.03■□□□□ 0.48
RNF40-206ENST00000564260 RBP5P82980 135 aa18.03■□□□□ 0.48
RNF40-206ENST00000564260 TFAMQ00059 246 aaKnown RBP18.03■□□□□ 0.48
RNF40-206ENST00000564260 PTPN14Q15678 1187 aa18.03■□□□□ 0.48
RNF40-206ENST00000564260 SKOR2Q2VWA4 1001 aaPredicted RBP18.03■□□□□ 0.48
RNF40-206ENST00000564260 KIAA0319Q5VV43 1072 aa18.03■□□□□ 0.48
RNF40-206ENST00000564260 CEP135Q66GS9 1140 aa18.03■□□□□ 0.48
RNF40-206ENST00000564260 FAM186BQ8IYM0 893 aa18.03■□□□□ 0.48
RNF40-206ENST00000564260 ZSWIM2Q8NEG5 633 aa18.03■□□□□ 0.48
RNF40-206ENST00000564260 MAFAQ8NHW3 353 aaPredicted RBP18.03■□□□□ 0.48
RNF40-206ENST00000564260 NOC3LQ8WTT2 800 aaKnown RBP18.03■□□□□ 0.48
RNF40-206ENST00000564260 PIK3R5Q8WYR1 880 aa18.03■□□□□ 0.48
RNF40-206ENST00000564260 VN1R3Q9BXE9 311 aa18.03■□□□□ 0.48
RNF40-206ENST00000564260 GPR62Q9BZJ7 368 aa18.03■□□□□ 0.48
RNF40-206ENST00000564260 GOLGA2P5Q9HBQ8 144 aa18.03■□□□□ 0.48
RNF40-206ENST00000564260 DSEQ9UL01 958 aa18.03■□□□□ 0.48
RNF40-206ENST00000564260 PDCD11Q14690 1871 aaKnown RBP18.03■□□□□ 0.48
RNF40-206ENST00000564260 C2orf71A6NGG8 1288 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 BIN1O00499 593 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 AKAP3O75969 853 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 LETM1O95202 739 aaPredicted RBP18.02■□□□□ 0.48
RNF40-206ENST00000564260 CXCL14O95715 111 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 STAU1O95793 577 aaKnown RBP18.02■□□□□ 0.48
RNF40-206ENST00000564260 TNNI1P19237 187 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 TYMPP19971 482 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 TAF6P49848 677 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 NLRP12P59046 1061 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 LILRA4P59901 499 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 MYO1EQ12965 1108 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 SV2CQ496J9 727 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 ANKRD40Q6AI12 368 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 TTI2Q6NXR4 508 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 ELMSAN1Q6PJG2 1045 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 CD300LGQ6UXG3 332 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 ANKS3Q6ZW76 656 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 FILIP1Q7Z7B0 1213 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 C1orf127Q8N9H9 656 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 RDH13Q8NBN7 331 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 C3orf58Q8NDZ4 430 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 NELFBQ8WX92 580 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 PCDHB8Q9UN66 801 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 COG5Q9UP83 839 aa18.02■□□□□ 0.48
RNF40-206ENST00000564260 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.01■□□□□ 0.47
RNF40-206ENST00000564260 ADH1AP07327 375 aa18.01■□□□□ 0.47
RNF40-206ENST00000564260 FAM163BP0C2L3 166 aa18.01■□□□□ 0.47
RNF40-206ENST00000564260 DLATP10515 647 aaKnown RBP18.01■□□□□ 0.47
RNF40-206ENST00000564260 CD44P16070 742 aaKnown RBP18.01■□□□□ 0.47
RNF40-206ENST00000564260 ATICP31939 592 aa18.01■□□□□ 0.47
RNF40-206ENST00000564260 IRS1P35568 1242 aa18.01■□□□□ 0.47
RNF40-206ENST00000564260 SPAG1Q07617 926 aa18.01■□□□□ 0.47
RNF40-206ENST00000564260 BFSP1Q12934 665 aa18.01■□□□□ 0.47
RNF40-206ENST00000564260 DUSP6Q16828 381 aa18.01■□□□□ 0.47
RNF40-206ENST00000564260 FAM171A1Q5VUB5 890 aa18.01■□□□□ 0.47
RNF40-206ENST00000564260 PLPP4Q5VZY2 271 aa18.01■□□□□ 0.47
RNF40-206ENST00000564260 TMEM184AQ6ZMB5 413 aa18.01■□□□□ 0.47
RNF40-206ENST00000564260 RTL10Q7L3V2 364 aa18.01■□□□□ 0.47
RNF40-206ENST00000564260 FRMD5Q7Z6J6 570 aa18.01■□□□□ 0.47
RNF40-206ENST00000564260 EFHBQ8N7U6 833 aa18.01■□□□□ 0.47
RNF40-206ENST00000564260 CXorf38Q8TB03 319 aa18.01■□□□□ 0.47
RNF40-206ENST00000564260 CCDC127Q96BQ5 260 aa18.01■□□□□ 0.47
RNF40-206ENST00000564260 MTMR12Q9C0I1 747 aa18.01■□□□□ 0.47
RNF40-206ENST00000564260 TLE6Q9H808 572 aa18.01■□□□□ 0.47
RNF40-206ENST00000564260 BACE2Q9Y5Z0 518 aa18.01■□□□□ 0.47
RNF40-206ENST00000564260 H7C4K7 107 aa18■□□□□ 0.47
RNF40-206ENST00000564260 ODC1P11926 461 aa18■□□□□ 0.47
RNF40-206ENST00000564260 NDUFV1P49821 464 aa18■□□□□ 0.47
RNF40-206ENST00000564260 VAMP7P51809 220 aa18■□□□□ 0.47
RNF40-206ENST00000564260 WNT7BP56706 349 aa18■□□□□ 0.47
RNF40-206ENST00000564260 CTC1Q2NKJ3 1217 aa18■□□□□ 0.47
RNF40-206ENST00000564260 TCEAL5Q5H9L2 206 aa18■□□□□ 0.47
RNF40-206ENST00000564260 ISM2Q6H9L7 571 aa18■□□□□ 0.47
RNF40-206ENST00000564260 DPH6Q7L8W6 267 aa18■□□□□ 0.47
RNF40-206ENST00000564260 TRAPPC11Q7Z392 1133 aa18■□□□□ 0.47
RNF40-206ENST00000564260 CSGALNACT2Q8N6G5 542 aa18■□□□□ 0.47
RNF40-206ENST00000564260 HDAC7Q8WUI4 952 aa18■□□□□ 0.47
RNF40-206ENST00000564260 PABPC5Q96DU9 382 aaKnown RBP18■□□□□ 0.47
RNF40-206ENST00000564260 FAXDC2Q96IV6 333 aa18■□□□□ 0.47
RNF40-206ENST00000564260 VRTNQ9H8Y1 702 aa18■□□□□ 0.47
RNF40-206ENST00000564260 GDAP2Q9NXN4 497 aa18■□□□□ 0.47
RNF40-206ENST00000564260 MAFFQ9ULX9 164 aa18■□□□□ 0.47
RNF40-206ENST00000564260 PLXNA4Q9HCM2 1894 aa18■□□□□ 0.47
RNF40-206ENST00000564260 F8W810 466 aa17.99■□□□□ 0.47
RNF40-206ENST00000564260 OAZ2O95190 189 aa17.99■□□□□ 0.47
RNF40-206ENST00000564260 ITGB3P05106 788 aa17.99■□□□□ 0.47
RNF40-206ENST00000564260 CYP11A1P05108 521 aa17.99■□□□□ 0.47
RNF40-206ENST00000564260 CASP4P49662 377 aa17.99■□□□□ 0.47
RNF40-206ENST00000564260 PMS1P54277 932 aaKnown RBP17.99■□□□□ 0.47
RNF40-206ENST00000564260 MARSP56192 900 aaKnown RBP17.99■□□□□ 0.47
RNF40-206ENST00000564260 MRPL58Q14197 206 aaKnown RBP17.99■□□□□ 0.47
RNF40-206ENST00000564260 ZACNQ401N2 412 aa17.99■□□□□ 0.47
RNF40-206ENST00000564260 KLHL10Q6JEL2 608 aa17.99■□□□□ 0.47
RNF40-206ENST00000564260 SASS6Q6UVJ0 657 aa17.99■□□□□ 0.47
RNF40-206ENST00000564260 TAF4BQ92750 862 aa17.99■□□□□ 0.47
RNF40-206ENST00000564260 BORCS6Q96GS4 357 aa17.99■□□□□ 0.47
RNF40-206ENST00000564260 GZF1Q9H116 711 aaPredicted RBP17.99■□□□□ 0.47
RNF40-206ENST00000564260 ANO10Q9NW15 660 aa17.99■□□□□ 0.47
RNF40-206ENST00000564260 MTRRQ9UBK8 725 aa17.99■□□□□ 0.47
RNF40-206ENST00000564260 CACNG4Q9UBN1 327 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms