RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 DAAM1Q9Y4D1 1078 aa13.91□□□□□ -0.18
SPG7-209ENST00000564047 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.91□□□□□ -0.182e-9■■■■□ 26
SPG7-209ENST00000564047 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.91□□□□□ -0.18
SPG7-209ENST00000564047 SCN5AQ14524 2016 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 CST3P01034 146 aaPredicted RBP13.9□□□□□ -0.18
SPG7-209ENST00000564047 AMHP03971 560 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 ITGB3P05106 788 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 FGFR1P11362 822 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 KLK7P49862 253 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 AFF1P51825 1210 aaKnown RBP13.9□□□□□ -0.18
SPG7-209ENST00000564047 TERF1P54274 439 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 RBP5P82980 135 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 TRPC3Q13507 836 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 TRIM14Q14142 442 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 NAB2Q15742 525 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 NOMO2Q5JPE7 1267 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 CLLU1OSQ5K130 101 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 DPY19L2P1Q6NXN4 242 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 PSRC1Q6PGN9 363 aaPredicted RBP13.9□□□□□ -0.18
SPG7-209ENST00000564047 TRIM65Q6PJ69 517 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 CXorf38Q8TB03 319 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 URGCPQ8TCY9 931 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 ATXN2LQ8WWM7 1075 aaKnown RBP13.9□□□□□ -0.18
SPG7-209ENST00000564047 TAF4BQ92750 862 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 C18orf25Q96B23 403 aaPredicted RBP13.9□□□□□ -0.18
SPG7-209ENST00000564047 EDEM3Q9BZQ6 932 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 SIX2Q9NPC8 291 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 IMPACTQ9P2X3 320 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 TUBGCP4Q9UGJ1 667 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 SIX4Q9UIU6 781 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 PLAGL2Q9UPG8 496 aa13.9□□□□□ -0.18
SPG7-209ENST00000564047 RALGAPA2Q2PPJ7 1873 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 STAU1O95793 577 aaKnown RBP13.89□□□□□ -0.19
SPG7-209ENST00000564047 ASS1P00966 412 aaKnown RBP13.89□□□□□ -0.19
SPG7-209ENST00000564047 TRIM21P19474 475 aaKnown RBP13.89□□□□□ -0.19
SPG7-209ENST00000564047 LRPAP1P30533 357 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 HOXD11P31277 338 aaPredicted RBP13.89□□□□□ -0.19
SPG7-209ENST00000564047 ATICP31939 592 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 WDR5P61964 334 aaKnown RBP13.89□□□□□ -0.19
SPG7-209ENST00000564047 TBX2Q13207 712 aaPredicted RBP13.89□□□□□ -0.19
SPG7-209ENST00000564047 GRIN2CQ14957 1233 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 SGSM1Q2NKQ1 1148 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 WDR44Q5JSH3 913 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 TMEM240Q5SV17 173 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 KLHDC7AQ5VTJ3 777 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 ZNF365Q70YC5 407 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 ABI1Q8IZP0 508 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 CCDC150Q8NCX0 1101 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 HELQQ8TDG4 1101 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 TOP1MTQ969P6 601 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 IMPG2Q9BZV3 1241 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 TTYH3Q9C0H2 523 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 GANQ9H2C0 597 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 FAM207AQ9NSI2 230 aaPredicted RBP13.89□□□□□ -0.19
SPG7-209ENST00000564047 APEX2Q9UBZ4 518 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 FBXL5Q9UKA1 691 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 INPP5FQ9Y2H2 1132 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 R3HCC1Q9Y3T6 440 aaKnown RBP13.89□□□□□ -0.19
SPG7-209ENST00000564047 CHD9Q3L8U1 2897 aa13.89□□□□□ -0.19
SPG7-209ENST00000564047 A0A1W2PQJ5 194 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 ANO9A1A5B4 782 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 LRRN2O75325 713 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 NOL4O94818 638 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 POMCP01189 267 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 KRT19P08727 400 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 RFX1P22670 979 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 DNAJB2P25686 324 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 POLR2BP30876 1174 aaKnown RBP13.88□□□□□ -0.19
SPG7-209ENST00000564047 RPL9P32969 192 aaKnown RBP13.88□□□□□ -0.19
SPG7-209ENST00000564047 KCNJ6P48051 423 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 GUCY2FP51841 1108 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 EPHB4P54760 987 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 MYL6P60660 151 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 SOX4Q06945 474 aaPredicted RBP13.88□□□□□ -0.19
SPG7-209ENST00000564047 TUSC3Q13454 348 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 C9orf57Q5W0N0 161 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 OTOP2Q7RTS6 562 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 PPFIBP1Q86W92 1011 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 LRRC52Q8N7C0 313 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 SPC24Q8NBT2 197 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 FAXDC2Q96IV6 333 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 FAM81BQ96LP2 452 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 UROC1Q96N76 676 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 NT5C1BQ96P26 610 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 CASD1Q96PB1 797 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 GAS2L1Q99501 681 aaPredicted RBP13.88□□□□□ -0.19
SPG7-209ENST00000564047 MRPL9Q9BYD2 267 aaKnown RBP13.88□□□□□ -0.19
SPG7-209ENST00000564047 XYLT2Q9H1B5 865 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 VRTNQ9H8Y1 702 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 CEP72Q9P209 647 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 THEGQ9P2T0 379 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 AGAP1Q9UPQ3 857 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 REV3LO60673 3130 aa13.88□□□□□ -0.19
SPG7-209ENST00000564047 PIRO00625 290 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 EPHB6O15197 1021 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 DGKIO75912 1065 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 GYPCP04921 128 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 TPM1P09493 284 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 UCHL3P15374 230 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 PNPLA4P41247 253 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms