RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 HSPH1Q92598 858 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 HSD17B14Q9BPX1 270 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 HESX1Q9UBX0 185 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 AGAP1Q9UPQ3 857 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 ARL2BPQ9Y2Y0 163 aa11.08□□□□□ -0.64
RNF40-204ENST00000563683 MYH7BA7E2Y1 1941 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 GTPBP10A4D1E9 387 aaKnown RBP11.07□□□□□ -0.64
RNF40-204ENST00000563683 VIL1P09327 827 aaKnown RBP11.07□□□□□ -0.64
RNF40-204ENST00000563683 CIITAP33076 1130 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 ANGEL2Q5VTE6 544 aaKnown RBP11.07□□□□□ -0.64
RNF40-204ENST00000563683 NT5DC3Q86UY8 548 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 KCTD17Q8N5Z5 321 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 SLC5A5Q92911 643 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 TMEM109Q9BVC6 243 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 UVRAGQ9P2Y5 699 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 ADAMTSL3P82987 1691 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 ANKRD33BA6NCL7 494 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 TJP3O95049 919 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 FESP07332 822 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 CYP11B1P15538 503 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 STAT5BP51692 787 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 PPP3CAQ08209 521 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 GPS1Q13098 491 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 MAPK7Q13164 816 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 TFDP1Q14186 410 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 ZNF699Q32M78 642 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 ZNF568Q3ZCX4 644 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 C6orf163Q5TEZ5 329 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 DUPD1Q68J44 220 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 SV2AQ7L0J3 742 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 SH3BP5LQ7L8J4 393 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 DEFB132Q7Z7B7 95 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 ZNF354CQ86Y25 554 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 RBM46Q8TBY0 533 aaKnown RBP11.07□□□□□ -0.64
RNF40-204ENST00000563683 PSPC1Q8WXF1 523 aaKnown RBP11.07□□□□□ -0.64
RNF40-204ENST00000563683 AKT1S1Q96B36 256 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 NAF1Q96HR8 494 aaKnown RBP11.07□□□□□ -0.64
RNF40-204ENST00000563683 OSBPL1AQ9BXW6 950 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 NGRNQ9NPE2 291 aaKnown RBP11.07□□□□□ -0.64
RNF40-204ENST00000563683 ARHGEF3Q9NR81 526 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 E7ENQ6 273 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 ABLIM1O14639 778 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 CALCAP01258 141 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 SHBGP04278 402 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 PPP2R5CQ13362 524 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 GALNTL6Q49A17 601 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 ZNF667Q5HYK9 610 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 PHLDB3Q6NSJ2 640 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 ZBTB10Q96DT7 871 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 CFAP57Q96MR6 1250 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 TSC22D3Q99576 134 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 ZSWIM1Q9BR11 485 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 PDCD2LQ9BRP1 358 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 RPF1Q9H9Y2 349 aaKnown RBP11.07□□□□□ -0.64
RNF40-204ENST00000563683 STXBP5LQ9Y2K9 1186 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 TTLL3Q9Y4R7 772 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 ZNF142P52746 1687 aaPredicted RBP11.07□□□□□ -0.64
RNF40-204ENST00000563683 RREB1Q92766 1687 aa11.07□□□□□ -0.64
RNF40-204ENST00000563683 UBE4BO95155 1302 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 WNT10BO00744 389 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 ITGB5P18084 799 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 GMPSP49915 693 aaPredicted RBP11.06□□□□□ -0.64
RNF40-204ENST00000563683 ZCWPW2Q504Y3 356 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 NBPF12Q5TAG4 269 aaPredicted RBP11.06□□□□□ -0.64
RNF40-204ENST00000563683 IZUMO3Q5VZ72 239 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 ENOSF1Q7L5Y1 443 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 SLC13A5Q86YT5 568 aaPredicted RBP11.06□□□□□ -0.64
RNF40-204ENST00000563683 PYROXD1Q8WU10 500 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 FAM149B1Q96BN6 582 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 HES6Q96HZ4 224 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 FAM84AQ96KN4 292 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 RXFP1Q9HBX9 757 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 PCDHB2Q9Y5E7 798 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 CASZ1Q86V15 1759 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 PIK3R2O00459 728 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 VCAM1P19320 739 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 SKIV2L2P42285 1042 aaKnown RBP11.06□□□□□ -0.64
RNF40-204ENST00000563683 SYCP2LQ5T4T6 812 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 SPOPLQ6IQ16 392 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 TATDN1Q6P1N9 297 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 DARS2Q6PI48 645 aaKnown RBP11.06□□□□□ -0.64
RNF40-204ENST00000563683 IL31RAQ8NI17 732 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 OTUD5Q96G74 571 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 ROPN1BQ9BZX4 212 aaPredicted RBP11.06□□□□□ -0.64
RNF40-204ENST00000563683 ROPN1Q9HAT0 212 aaPredicted RBP11.06□□□□□ -0.64
RNF40-204ENST00000563683 AGO4Q9HCK5 861 aaKnown RBP11.06□□□□□ -0.64
RNF40-204ENST00000563683 ATP5HO75947 161 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 WEE2P0C1S8 567 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 PRKCIP41743 596 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 CLK2P49760 499 aaKnown RBP11.06□□□□□ -0.64
RNF40-204ENST00000563683 ACTR2P61160 394 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 MRPS35P82673 323 aaKnown RBP11.06□□□□□ -0.64
RNF40-204ENST00000563683 NCOA4Q13772 614 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 EMC2Q15006 297 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 CNGA2Q16280 664 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 WDR72Q3MJ13 1102 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 TTC16Q8NEE8 873 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 ATL2Q8NHH9 583 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 MORC4Q8TE76 937 aa11.06□□□□□ -0.64
RNF40-204ENST00000563683 ATP8B4Q8TF62 1192 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms