RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 HIC2Q96JB3 615 aa13.49□□□□□ -0.25
CCDC187-201ENST00000563590 NDNQ99608 321 aa13.49□□□□□ -0.25
CCDC187-201ENST00000563590 ZSWIM1Q9BR11 485 aa13.49□□□□□ -0.25
CCDC187-201ENST00000563590 MARCOQ9UEW3 520 aaPredicted RBP13.49□□□□□ -0.25
CCDC187-201ENST00000563590 IKBKGQ9Y6K9 419 aa13.49□□□□□ -0.25
CCDC187-201ENST00000563590 MYO3BQ8WXR4 1341 aa13.49□□□□□ -0.25
CCDC187-201ENST00000563590 PDXKO00764 312 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 ENO1P06733 434 aaKnown RBP13.48□□□□□ -0.25
CCDC187-201ENST00000563590 SMARCA1P28370 1054 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 SERPINB3P29508 390 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 CCNFP41002 786 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 CRKP46108 304 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 BTKQ06187 659 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 MAP7Q14244 749 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 RBM41Q96IZ5 413 aaKnown RBP13.48□□□□□ -0.25
CCDC187-201ENST00000563590 RBM15Q96T37 977 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCDC187-201ENST00000563590 UBE2OQ9C0C9 1292 aaKnown RBP13.48□□□□□ -0.25
CCDC187-201ENST00000563590 CHST7Q9NS84 486 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 WDR35Q9P2L0 1181 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 hCG_1984214I3L0E3 225 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 STK10O94804 968 aaKnown RBP13.48□□□□□ -0.25
CCDC187-201ENST00000563590 TTC4O95801 387 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 NT5C2P49902 561 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 PPP2R5CQ13362 524 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 LMBRD2Q68DH5 695 aaPredicted RBP13.48□□□□□ -0.25
CCDC187-201ENST00000563590 RHOT2Q8IXI1 618 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 ZNF713Q8N859 430 aaPredicted RBP13.48□□□□□ -0.25
CCDC187-201ENST00000563590 ASAP3Q8TDY4 903 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 TMEM109Q9BVC6 243 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 RUSC1Q9BVN2 902 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 ROPN1BQ9BZX4 212 aaPredicted RBP13.48□□□□□ -0.25
CCDC187-201ENST00000563590 INTS2Q9H0H0 1204 aaKnown RBP13.48□□□□□ -0.25
CCDC187-201ENST00000563590 ROPN1Q9HAT0 212 aaPredicted RBP13.48□□□□□ -0.25
CCDC187-201ENST00000563590 ANAPC7Q9UJX3 599 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 LIN7AO14910 233 aaPredicted RBP13.48□□□□□ -0.25
CCDC187-201ENST00000563590 HNRNPCP07910 306 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCDC187-201ENST00000563590 MKRN3Q13064 507 aaKnown RBP13.48□□□□□ -0.25
CCDC187-201ENST00000563590 TNFAIP8L3Q5GJ75 292 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 CATSPER3Q86XQ3 398 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCDC187-201ENST00000563590 OPTNQ96CV9 577 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 SNF8Q96H20 258 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 AGPAT1Q99943 283 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 TYW1Q9NV66 732 aaKnown RBP13.48□□□□□ -0.25
CCDC187-201ENST00000563590 PPARGC1AQ9UBK2 798 aaKnown RBP13.48□□□□□ -0.25
CCDC187-201ENST00000563590 WASF2Q9Y6W5 498 aa13.48□□□□□ -0.25
CCDC187-201ENST00000563590 MIF4GDA9UHW6 222 aaKnown RBP13.47□□□□□ -0.25
CCDC187-201ENST00000563590 H3BRJ5 948 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 ECE2O60344 883 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 GJB6O95452 261 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 HSPA6P17066 643 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 EIF2AK2P19525 551 aaKnown RBP13.47□□□□□ -0.25
CCDC187-201ENST00000563590 MAPK4P31152 587 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 EPHB1P54762 984 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 ARHGAP4P98171 946 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 C1orf146Q5VVC0 180 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 IRGCQ6NXR0 463 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 SPATA24Q86W54 205 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 FAM178BQ8IXR5 827 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 SLC5A5Q92911 643 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 GRAMD1AQ96CP6 724 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 CENPKQ9BS16 269 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 FBXO6Q9NRD1 293 aaPredicted RBP13.47□□□□□ -0.25
CCDC187-201ENST00000563590 PCMTD2Q9NV79 361 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 ZNF711Q9Y462 761 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 PCDHA3Q9Y5H8 950 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 PNMA6FA0A0J9YX94 578 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 ARHGEF35A5YM69 484 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 MAGEA13PA6NCF6 341 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 TISP43B9A030 160 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 HNRNPRO43390 633 aaKnown RBP13.47□□□□□ -0.25
CCDC187-201ENST00000563590 TPP2P29144 1249 aaPredicted RBP13.47□□□□□ -0.25
CCDC187-201ENST00000563590 SERPINB6P35237 376 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 RPA3P35244 121 aaPredicted RBP13.47□□□□□ -0.25
CCDC187-201ENST00000563590 IRX4P78413 519 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 PKN2Q16513 984 aaKnown RBP13.47□□□□□ -0.25
CCDC187-201ENST00000563590 ASRGL1Q7L266 308 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 EEPD1Q7L9B9 569 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 ZBED8Q8IZ13 594 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 ACER1Q8TDN7 264 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 THTPAQ9BU02 230 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 SHCBP1LQ9BZQ2 653 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 ATP8B3O60423 1300 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 USP1O94782 785 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 LMNAP02545 664 aaKnown RBP13.47□□□□□ -0.25
CCDC187-201ENST00000563590 ARFIP2P53365 341 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 PPP4CP60510 307 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 NOP14P78316 857 aaKnown RBP13.47□□□□□ -0.25
CCDC187-201ENST00000563590 MFSD5Q6N075 450 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 PPP1R14CQ8TAE6 165 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 PIP4K2CQ8TBX8 421 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 MIPOL1Q8TD10 442 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 STK33Q9BYT3 514 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 DDX18Q9NVP1 670 aaKnown RBP13.47□□□□□ -0.25
CCDC187-201ENST00000563590 GALNT8Q9NY28 637 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 NINJ2Q9NZG7 142 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 PCYOX1Q9UHG3 505 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 RABGAP1Q9Y3P9 1069 aa13.47□□□□□ -0.25
CCDC187-201ENST00000563590 CCDC195A0A1B0GUA6 201 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 PI4K2BG5E9Z4 385 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms