RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 ITGB8P26012 769 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 SOX5P35711 763 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 MLH1P40692 756 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 STAT1P42224 750 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 AFF1P51825 1210 aaKnown RBP10.93□□□□□ -0.66
SMG1-208ENST00000563448 CDK17Q00537 523 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 GCNT1Q02742 428 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 SOX4Q06945 474 aaPredicted RBP10.93□□□□□ -0.66
SMG1-208ENST00000563448 ASIC2Q16515 512 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 CYP26C1Q6V0L0 522 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 SLC24A5Q71RS6 500 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 IRF2BP2Q7Z5L9 587 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 TMTC1Q8IUR5 882 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 RNF169Q8NCN4 708 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 BEST2Q8NFU1 509 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 SEPT8Q92599 483 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 APBB2Q92870 758 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 TRIM43Q96BQ3 446 aaPredicted RBP10.93□□□□□ -0.66
SMG1-208ENST00000563448 PGBD4Q96DM1 585 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 PPP1R10Q96QC0 940 aaKnown RBP10.93□□□□□ -0.66
SMG1-208ENST00000563448 ARID3AQ99856 593 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 RSAD1Q9HA92 442 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 ZNHIT6Q9NWK9 470 aaKnown RBP10.93□□□□□ -0.66
SMG1-208ENST00000563448 ARHGAP20Q9P2F6 1191 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 AGAP1Q9UPQ3 857 aa10.93□□□□□ -0.66
SMG1-208ENST00000563448 ARL5CA6NH57 179 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 PPEF2O14830 753 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 NRDCO43847 1150 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 GFPT2O94808 682 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 CYP3A5P20815 502 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 RBP5P82980 135 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 ARID5AQ03989 594 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 CUL2Q13617 745 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 NAB2Q15742 525 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 ZNF699Q32M78 642 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 DEFB128Q7Z7B8 93 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 ZSCAN30Q86W11 494 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 SHC3Q92529 594 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 TAF4BQ92750 862 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 VWCEQ96DN2 955 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 IMPG2Q9BZV3 1241 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 ANO9A1A5B4 782 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 KIAA0355O15063 1070 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 EVI5O60447 810 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 EOMESO95936 686 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 TIMP1P01033 207 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 SERPING1P05155 500 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 ATICP31939 592 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 PRKCIP41743 596 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 SCNN1GP51170 649 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 C9orf57Q5W0N0 161 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 UBR7Q8N806 425 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 KIAA1524Q8TCG1 905 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 FAM81BQ96LP2 452 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 RPS6KC1Q96S38 1066 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 VRTNQ9H8Y1 702 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 NHEJ1Q9H9Q4 299 aaPredicted RBP10.92□□□□□ -0.66
SMG1-208ENST00000563448 GOLGA2P5Q9HBQ8 144 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 PRDM5Q9NQX1 630 aaPredicted RBP10.92□□□□□ -0.66
SMG1-208ENST00000563448 POLIQ9UNA4 740 aa10.92□□□□□ -0.66
SMG1-208ENST00000563448 MYH10P35580 1976 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 KIAA1671Q9BY89 1806 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 PIRO00625 290 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 XPOTO43592 962 aaKnown RBP10.91□□□□□ -0.66
SMG1-208ENST00000563448 OFD1O75665 1012 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 CLSTN1O94985 981 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 STAU1O95793 577 aaKnown RBP10.91□□□□□ -0.66
SMG1-208ENST00000563448 THP07101 528 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 FERP16591 822 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 ACO1P21399 889 aaKnown RBP10.91□□□□□ -0.66
SMG1-208ENST00000563448 TBXAS1P24557 533 aaPredicted RBP10.91□□□□□ -0.66
SMG1-208ENST00000563448 ASPAP45381 313 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 MAPK8IP2Q13387 824 aaPredicted RBP10.91□□□□□ -0.66
SMG1-208ENST00000563448 FAM43BQ6ZT52 329 aaPredicted RBP10.91□□□□□ -0.66
SMG1-208ENST00000563448 ENOSF1Q7L5Y1 443 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 FAM71AQ8IYT1 594 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 HPDLQ96IR7 371 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 NIF3L1Q9GZT8 377 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 HAUS4Q9H6D7 363 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 UBN1Q9NPG3 1134 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 PCDH10Q9P2E7 1040 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.91□□□□□ -0.66
SMG1-208ENST00000563448 INPPL1O15357 1258 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 LRPAP1P30533 357 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 RFC2P35250 354 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 CLCN1P35523 988 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 EIF4A3P38919 411 aaKnown RBP10.91□□□□□ -0.66
SMG1-208ENST00000563448 KCNJ6P48051 423 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 KLHL30Q0D2K2 578 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 ASTE1Q2TB18 679 aaPredicted RBP10.91□□□□□ -0.66
SMG1-208ENST00000563448 WDR72Q3MJ13 1102 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 TDRD12Q587J7 1177 aaKnown RBP10.91□□□□□ -0.66
SMG1-208ENST00000563448 ZNF667Q5HYK9 610 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 TOGARAM2Q6ZUX3 1019 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 JAKMIP2Q96AA8 810 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 ELAC1Q9H777 363 aaKnown RBP10.91□□□□□ -0.66
SMG1-208ENST00000563448 TMEM161AQ9NX61 479 aa10.91□□□□□ -0.66
SMG1-208ENST00000563448 NXF1Q9UBU9 619 aaKnown RBP10.91□□□□□ -0.66
SMG1-208ENST00000563448 EPN1Q9Y6I3 576 aaPredicted RBP10.91□□□□□ -0.66
SMG1-208ENST00000563448 SSU72P8A0A1W2PR75 194 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms