RNA–Protein interactions for RNA: ENST00000563275.1

PKM-208, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 699 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-208ENST00000563275 GAP43P17677 238 aa13.66□□□□□ -0.22
PKM-208ENST00000563275 HOXD11P31277 338 aaPredicted RBP13.66□□□□□ -0.22
PKM-208ENST00000563275 VCPP55072 806 aaKnown RBP13.66□□□□□ -0.22
PKM-208ENST00000563275 SPAG1Q07617 926 aa13.66□□□□□ -0.22
PKM-208ENST00000563275 KCNA1Q09470 495 aa13.66□□□□□ -0.22
PKM-208ENST00000563275 HTR4Q13639 388 aa13.66□□□□□ -0.22
PKM-208ENST00000563275 SLFN12LQ6IEE8 588 aa13.66□□□□□ -0.22
PKM-208ENST00000563275 CRELD2Q6UXH1 353 aaPredicted RBP13.66□□□□□ -0.22
PKM-208ENST00000563275 DYMQ7RTS9 669 aa13.66□□□□□ -0.22
PKM-208ENST00000563275 GRASPQ7Z6J2 395 aaPredicted RBP13.66□□□□□ -0.22
PKM-208ENST00000563275 BEST2Q8NFU1 509 aa13.66□□□□□ -0.22
PKM-208ENST00000563275 NXPE3Q969Y0 559 aa13.66□□□□□ -0.22
PKM-208ENST00000563275 RPF1Q9H9Y2 349 aaKnown RBP13.66□□□□□ -0.22
PKM-208ENST00000563275 PIDD1Q9HB75 910 aa13.66□□□□□ -0.22
PKM-208ENST00000563275 KBTBD4Q9NVX7 518 aa13.66□□□□□ -0.22
PKM-208ENST00000563275 DERAQ9Y315 318 aa13.66□□□□□ -0.22
PKM-208ENST00000563275 NUB1Q9Y5A7 615 aa13.66□□□□□ -0.22
PKM-208ENST00000563275 ZFP37Q9Y6Q3 630 aaPredicted RBP13.66□□□□□ -0.22
PKM-208ENST00000563275 DOCK6Q96HP0 2047 aa13.66□□□□□ -0.22
PKM-208ENST00000563275 NOTCH4Q99466 2003 aa13.66□□□□□ -0.22
PKM-208ENST00000563275 MYH15Q9Y2K3 1946 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 ANO9A1A5B4 782 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 H7C4K7 107 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 NFICP08651 508 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 ATF2P15336 505 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 AVPR2P30518 371 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 MCM4P33991 863 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 STAT6P42226 847 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 MATR3P43243 847 aaKnown RBP eCLIP13.65□□□□□ -0.22
PKM-208ENST00000563275 CASP5P51878 434 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 NTHL1P78549 312 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 L1TD1Q5T7N2 865 aaKnown RBP13.65□□□□□ -0.22
PKM-208ENST00000563275 TPGS2Q68CL5 300 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 CNNM4Q6P4Q7 775 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 HSCBQ8IWL3 235 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 SUGP1Q8IWZ8 645 aaKnown RBP13.65□□□□□ -0.22
PKM-208ENST00000563275 TCEAL8Q8IYN2 117 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 APPL2Q8NEU8 664 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 PRSS33Q8NF86 280 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 RSAD2Q8WXG1 361 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 FGFBP2Q9BYJ0 223 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 ASB7Q9H672 318 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 AVENQ9NQS1 362 aaPredicted RBP13.65□□□□□ -0.22
PKM-208ENST00000563275 TFIP11Q9UBB9 837 aaKnown RBP13.65□□□□□ -0.22
PKM-208ENST00000563275 CDH7Q9ULB5 785 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 KCNH3Q9ULD8 1083 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 MAFFQ9ULX9 164 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 C2CD2Q9Y426 696 aa13.65□□□□□ -0.22
PKM-208ENST00000563275 PIRO00625 290 aa13.64□□□□□ -0.23
PKM-208ENST00000563275 PPEF2O14830 753 aa13.64□□□□□ -0.23
PKM-208ENST00000563275 CCL16O15467 120 aa13.64□□□□□ -0.23
PKM-208ENST00000563275 XPOTO43592 962 aaKnown RBP13.64□□□□□ -0.23
PKM-208ENST00000563275 XYLBO75191 536 aa13.64□□□□□ -0.23
PKM-208ENST00000563275 ZSCAN22P10073 491 aaPredicted RBP13.64□□□□□ -0.23
PKM-208ENST00000563275 FSHRP23945 695 aa13.64□□□□□ -0.23
PKM-208ENST00000563275 GBP2P32456 591 aaPredicted RBP13.64□□□□□ -0.23
PKM-208ENST00000563275 ACOT2P49753 483 aa13.64□□□□□ -0.23
PKM-208ENST00000563275 GUCY2FP51841 1108 aa13.64□□□□□ -0.23
PKM-208ENST00000563275 NHLH1Q02575 133 aa13.64□□□□□ -0.23
PKM-208ENST00000563275 PKP1Q13835 747 aa13.64□□□□□ -0.23
PKM-208ENST00000563275 STK38Q15208 465 aa13.64□□□□□ -0.23
PKM-208ENST00000563275 JADE1Q6IE81 842 aa13.64□□□□□ -0.23
PKM-208ENST00000563275 ZNF280DQ6N043 979 aa13.64□□□□□ -0.23
PKM-208ENST00000563275 SHC4Q6S5L8 630 aa13.64□□□□□ -0.23
PKM-208ENST00000563275 GET4Q7L5D6 327 aaPredicted RBP13.64□□□□□ -0.23
PKM-208ENST00000563275 SLC44A3Q8N4M1 653 aa13.64□□□□□ -0.23
PKM-208ENST00000563275 FGF13Q92913 245 aa13.64□□□□□ -0.23
PKM-208ENST00000563275 ZNF396Q96N95 335 aaPredicted RBP13.64□□□□□ -0.23
PKM-208ENST00000563275 PANK2Q9BZ23 570 aa13.64□□□□□ -0.23
PKM-208ENST00000563275 TNMDQ9H2S6 317 aa13.64□□□□□ -0.23
PKM-208ENST00000563275 CUEDC2Q9H467 287 aa13.64□□□□□ -0.23
PKM-208ENST00000563275 MRPL44Q9H9J2 332 aaKnown RBP13.64□□□□□ -0.23
PKM-208ENST00000563275 DNMT3BQ9UBC3 853 aaKnown RBP13.64□□□□□ -0.23
PKM-208ENST00000563275 AGO2Q9UKV8 859 aaKnown RBP13.64□□□□□ -0.23
PKM-208ENST00000563275 SPTLC1O15269 473 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 NARSO43776 548 aaKnown RBP13.63□□□□□ -0.23
PKM-208ENST00000563275 CUTAO60888 179 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 SEC24AO95486 1093 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 VNN2O95498 520 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 F13A1P00488 732 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 NPR3P17342 541 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 TYMPP19971 482 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 PAX3P23760 479 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 NUBP1P53384 320 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 LILRA4P59901 499 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 TCF15Q12870 199 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 ALCAMQ13740 583 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 POSTNQ15063 836 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 CTXN3Q4LDR2 81 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 C9orf57Q5W0N0 161 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 CWF19L1Q69YN2 538 aaKnown RBP13.63□□□□□ -0.23
PKM-208ENST00000563275 ADALQ6DHV7 355 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 POTEHQ6S545 545 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 TMEM105Q8N8V8 129 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 ITFG1Q8TB96 612 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 PRRX2Q99811 253 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 OXCT2Q9BYC2 517 aaPredicted RBP13.63□□□□□ -0.23
PKM-208ENST00000563275 TRIM9Q9C026 710 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 HCFC1R1Q9NWW0 138 aa13.63□□□□□ -0.23
PKM-208ENST00000563275 WNT16Q9UBV4 365 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms