RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 CCNE1P24864 410 aa18.87■□□□□ 0.61
CCNDBP1-204ENST00000563065 TKTP29401 623 aaKnown RBP18.87■□□□□ 0.61
CCNDBP1-204ENST00000563065 GLUD2P49448 558 aa18.87■□□□□ 0.61
CCNDBP1-204ENST00000563065 DSG1Q02413 1049 aa18.87■□□□□ 0.61
CCNDBP1-204ENST00000563065 STIM1Q13586 685 aa18.87■□□□□ 0.61
CCNDBP1-204ENST00000563065 EDRF1Q3B7T1 1238 aa18.87■□□□□ 0.61
CCNDBP1-204ENST00000563065 PDE12Q6L8Q7 609 aaKnown RBP18.87■□□□□ 0.61
CCNDBP1-204ENST00000563065 KIAA1841Q6NSI8 718 aa18.87■□□□□ 0.61
CCNDBP1-204ENST00000563065 CSGALNACT2Q8N6G5 542 aa18.87■□□□□ 0.61
CCNDBP1-204ENST00000563065 TRIML1Q8N9V2 468 aa18.87■□□□□ 0.61
CCNDBP1-204ENST00000563065 CXorf38Q8TB03 319 aa18.87■□□□□ 0.61
CCNDBP1-204ENST00000563065 CACTINQ8WUQ7 758 aaKnown RBP18.87■□□□□ 0.61
CCNDBP1-204ENST00000563065 RIN2Q8WYP3 895 aaPredicted RBP18.87■□□□□ 0.61
CCNDBP1-204ENST00000563065 FNBP1Q96RU3 617 aa18.87■□□□□ 0.61
CCNDBP1-204ENST00000563065 MRPL17Q9NRX2 175 aaKnown RBP18.87■□□□□ 0.61
CCNDBP1-204ENST00000563065 SIX4Q9UIU6 781 aa18.87■□□□□ 0.61
CCNDBP1-204ENST00000563065 FRMD4BQ9Y2L6 1034 aa18.87■□□□□ 0.61
CCNDBP1-204ENST00000563065 SCN1AP35498 2009 aa18.86■□□□□ 0.61
CCNDBP1-204ENST00000563065 PSMA7O14818 248 aa18.86■□□□□ 0.61
CCNDBP1-204ENST00000563065 MBD3O95983 291 aa18.86■□□□□ 0.61
CCNDBP1-204ENST00000563065 ITGB3P05106 788 aa18.86■□□□□ 0.61
CCNDBP1-204ENST00000563065 URODP06132 367 aa18.86■□□□□ 0.61
CCNDBP1-204ENST00000563065 TMEM191BP0C7N4 346 aa18.86■□□□□ 0.61
CCNDBP1-204ENST00000563065 RPL17P18621 184 aaKnown RBP18.86■□□□□ 0.61
CCNDBP1-204ENST00000563065 RPL13P26373 211 aaKnown RBP18.86■□□□□ 0.61
CCNDBP1-204ENST00000563065 POLR2BP30876 1174 aaKnown RBP18.86■□□□□ 0.61
CCNDBP1-204ENST00000563065 LILRA4P59901 499 aa18.86■□□□□ 0.61
CCNDBP1-204ENST00000563065 SURF1Q15526 300 aa18.86■□□□□ 0.61
CCNDBP1-204ENST00000563065 NT5DC4Q86YG4 428 aa18.86■□□□□ 0.61
CCNDBP1-204ENST00000563065 PARD3BQ8TEW8 1205 aa18.86■□□□□ 0.61
CCNDBP1-204ENST00000563065 TSG101Q99816 390 aa18.86■□□□□ 0.61
CCNDBP1-204ENST00000563065 DUSP9Q99956 384 aaKnown RBP18.86■□□□□ 0.61
CCNDBP1-204ENST00000563065 TTPALQ9BTX7 342 aa18.86■□□□□ 0.61
CCNDBP1-204ENST00000563065 AGAP1Q9UPQ3 857 aa18.86■□□□□ 0.61
CCNDBP1-204ENST00000563065 VWA8A3KMH1 1905 aa18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 LRRIQ3A6PVS8 624 aaPredicted RBP18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 KRT19P08727 400 aa18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 CNPP09543 421 aaKnown RBP18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 FGFR3P22607 806 aa18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 DUSP6Q16828 381 aa18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 DUOXA2Q1HG44 320 aa18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 C1orf220Q5T0J3 134 aa18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 TTI2Q6NXR4 508 aa18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 EP400NLQ6ZTU2 488 aa18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 WDR49Q8IV35 697 aa18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 GLYCTKQ8IVS8 523 aa18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 FAM186BQ8IYM0 893 aa18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 VN1R2Q8NFZ6 395 aa18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 LNX1Q8TBB1 728 aaPredicted RBP18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 ANKRD36BP1Q96IX9 119 aa18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 CGRRF1Q99675 332 aa18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 TMEM63CQ9P1W3 806 aa18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 TIMM13Q9Y5L4 95 aaPredicted RBP18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 IRAK3Q9Y616 596 aa18.85■□□□□ 0.61
CCNDBP1-204ENST00000563065 CETN3O15182 167 aa18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 TRAPPC3O43617 180 aa18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 CLASP2O75122 1294 aaKnown RBP18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 CST3P01034 146 aaPredicted RBP18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 PSMC2P35998 433 aaKnown RBP18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 ELAVL2Q12926 359 aaKnown RBP18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 BMS1Q14692 1282 aaKnown RBP18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 DPCR1Q3MIW9 517 aa18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 LLGL2Q6P1M3 1020 aa18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 ZC3H3Q8IXZ2 948 aaKnown RBP18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 SUSD3Q96L08 255 aa18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 KLHL5Q96PQ7 755 aa18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 MED15Q96RN5 788 aa18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 CLDND1Q9NY35 253 aa18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 STK39Q9UEW8 545 aa18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 UNC80Q8N2C7 3258 aa18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 TEX28O15482 410 aa18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 ADAM12O43184 909 aa18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 TNNC2P02585 160 aa18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 AARSP49588 968 aaKnown RBP eCLIP18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 FKBP3Q00688 224 aaKnown RBP18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 LRRC63Q05C16 580 aa18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 DLX2Q07687 328 aaPredicted RBP18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 PAK1Q13153 545 aa18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 RSPO2Q6UXX9 243 aaPredicted RBP18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 DSTYKQ6XUX3 929 aa18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 RBM43Q6ZSC3 357 aaKnown RBP18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 TRAPPC11Q7Z392 1133 aa18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 ELMO3Q96BJ8 720 aa18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 BORCS6Q96GS4 357 aa18.84■□□□□ 0.61
CCNDBP1-204ENST00000563065 BRWD1Q9NSI6 2320 aa18.83■□□□□ 0.61
CCNDBP1-204ENST00000563065 M0QZQ0 153 aa18.83■□□□□ 0.6
CCNDBP1-204ENST00000563065 GLP2RO95838 553 aa18.83■□□□□ 0.6
CCNDBP1-204ENST00000563065 TRIM49P0CI25 452 aa18.83■□□□□ 0.6
CCNDBP1-204ENST00000563065 TRIM49CP0CI26 452 aa18.83■□□□□ 0.6
CCNDBP1-204ENST00000563065 KLRC2P26717 231 aa18.83■□□□□ 0.6
CCNDBP1-204ENST00000563065 LTBRP36941 435 aa18.83■□□□□ 0.6
CCNDBP1-204ENST00000563065 PPP1R2P41236 205 aa18.83■□□□□ 0.6
CCNDBP1-204ENST00000563065 VAMP7P51809 220 aa18.83■□□□□ 0.6
CCNDBP1-204ENST00000563065 NLRP12P59046 1061 aa18.83■□□□□ 0.6
CCNDBP1-204ENST00000563065 ADAM15Q13444 863 aa18.83■□□□□ 0.6
CCNDBP1-204ENST00000563065 PPP2R3CQ969Q6 453 aa18.83■□□□□ 0.6
CCNDBP1-204ENST00000563065 SENP8Q96LD8 212 aa18.83■□□□□ 0.6
CCNDBP1-204ENST00000563065 CLSTN3Q9BQT9 956 aa18.83■□□□□ 0.6
CCNDBP1-204ENST00000563065 RXFP1Q9HBX9 757 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms