RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 SLC43A1O75387 559 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 HAUS5O94927 633 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 ESRRBO95718 433 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 GPANK1O95872 356 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 HKR1P10072 659 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 ITGAMP11215 1152 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 FCER1AP12319 257 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 CLK3P49761 638 aaKnown RBP3.13□□□□□ -1.91
CHD9-204ENST00000561869 VAV2P52735 878 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 USP14P54578 494 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 BLOC1S1P78537 153 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 HNRNPA0Q13151 305 aaKnown RBP3.13□□□□□ -1.91
CHD9-204ENST00000561869 PABPC1LQ4VXU2 614 aaKnown RBP3.13□□□□□ -1.91
CHD9-204ENST00000561869 BRDTQ58F21 947 aaPredicted RBP3.13□□□□□ -1.91
CHD9-204ENST00000561869 DNAJC10Q8IXB1 793 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 TBC1D15Q8TC07 691 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 ZG16BQ96DA0 208 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 CLPTM1LQ96KA5 538 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 PNKPQ96T60 521 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 TLR10Q9BXR5 811 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 UNKLQ9H9P5 680 aaKnown RBP3.13□□□□□ -1.91
CHD9-204ENST00000561869 RNF181Q9P0P0 153 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 CALCOCO1Q9P1Z2 691 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 SLC45A2Q9UMX9 530 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 SPEF1Q9Y4P9 236 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 TNFRSF18Q9Y5U5 241 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 MRFAP1Q9Y605 127 aa3.13□□□□□ -1.91
CHD9-204ENST00000561869 NT5C1B-RDH14C9J2C7 533 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 AGFG2O95081 481 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 MTHFD1P11586 935 aaKnown RBP3.12□□□□□ -1.91
CHD9-204ENST00000561869 BMP5P22003 454 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 FDXRP22570 491 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 AVPR1BP47901 424 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 MXRA7P84157 204 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 CREMQ03060 361 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 SNAPC2Q13487 334 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 RAB39AQ14964 217 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 PTPROQ16827 1216 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 GEN1Q17RS7 908 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 SPDYE7PQ495Y7 208 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 UTP14CQ5TAP6 766 aaKnown RBP3.12□□□□□ -1.91
CHD9-204ENST00000561869 EFCAB2Q5VUJ9 269 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 RSPH3Q86UC2 560 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 PRR18Q8N4B5 295 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 SUPT20HQ8NEM7 779 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 NLGN4YQ8NFZ3 816 aaPredicted RBP3.12□□□□□ -1.91
CHD9-204ENST00000561869 RNF31Q96EP0 1072 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 LRIG1Q96JA1 1093 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 Q96MF0 132 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 KLHL32Q96NJ5 620 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 MED15Q96RN5 788 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 JKAMPQ9P055 326 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 CTTNBP2NLQ9P2B4 639 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 NOX1Q9Y5S8 564 aa3.12□□□□□ -1.91
CHD9-204ENST00000561869 CFAP20Q9Y6A4 193 aaKnown RBP3.12□□□□□ -1.91
CHD9-204ENST00000561869 A0A1W2PS29 197 aa3.11□□□□□ -1.91
CHD9-204ENST00000561869 PRSS29PA6NIE9 313 aa3.11□□□□□ -1.91
CHD9-204ENST00000561869 F2RL2O00254 374 aa3.11□□□□□ -1.91
CHD9-204ENST00000561869 ERN1O75460 977 aaKnown RBP3.11□□□□□ -1.91
CHD9-204ENST00000561869 CD1AP06126 327 aa3.11□□□□□ -1.91
CHD9-204ENST00000561869 MALP21145 153 aa3.11□□□□□ -1.91
CHD9-204ENST00000561869 PLA2G5P39877 138 aa3.11□□□□□ -1.91
CHD9-204ENST00000561869 FXR1P51114 621 aaKnown RBP eCLIP3.11□□□□□ -1.91
CHD9-204ENST00000561869 ATP2B3Q16720 1220 aa3.11□□□□□ -1.91
CHD9-204ENST00000561869 UAP1L1Q3KQV9 507 aa3.11□□□□□ -1.91
CHD9-204ENST00000561869 KHDC1Q4VXA5 237 aaKnown RBP3.11□□□□□ -1.91
CHD9-204ENST00000561869 PRR16Q569H4 304 aa3.11□□□□□ -1.91
CHD9-204ENST00000561869 SP5Q6BEB4 398 aaPredicted RBP3.11□□□□□ -1.91
CHD9-204ENST00000561869 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.11□□□□□ -1.91
CHD9-204ENST00000561869 Q6ZNX1 250 aa3.11□□□□□ -1.91
CHD9-204ENST00000561869 ZNF365Q70YC5 407 aa3.11□□□□□ -1.91
CHD9-204ENST00000561869 TMPRSS9Q7Z410 1059 aa3.11□□□□□ -1.91
CHD9-204ENST00000561869 PNMA8AQ86V59 439 aaPredicted RBP3.11□□□□□ -1.91
CHD9-204ENST00000561869 PRIMA1Q86XR5 153 aa3.11□□□□□ -1.91
CHD9-204ENST00000561869 LNX2Q8N448 690 aa3.11□□□□□ -1.91
CHD9-204ENST00000561869 FAM98AQ8NCA5 519 aaKnown RBP3.11□□□□□ -1.91
CHD9-204ENST00000561869 NTN5Q8WTR8 489 aaPredicted RBP3.11□□□□□ -1.91
CHD9-204ENST00000561869 CRAMP1Q96RY5 1269 aa3.11□□□□□ -1.91
CHD9-204ENST00000561869 SMAD5Q99717 465 aaKnown RBP3.11□□□□□ -1.91
CHD9-204ENST00000561869 VRK1Q99986 396 aaPredicted RBP3.11□□□□□ -1.91
CHD9-204ENST00000561869 HOMER2Q9NSB8 354 aa3.11□□□□□ -1.91
CHD9-204ENST00000561869 FOXJ2Q9P0K8 574 aa3.11□□□□□ -1.91
CHD9-204ENST00000561869 MTO1Q9Y2Z2 717 aaKnown RBP3.11□□□□□ -1.91
CHD9-204ENST00000561869 POLR2AP24928 1970 aaKnown RBP3.11□□□□□ -1.91
CHD9-204ENST00000561869 COL11A2P13942 1736 aaPredicted RBP3.1□□□□□ -1.91
CHD9-204ENST00000561869 LRRC14BA6NHZ5 514 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 ZAR1LA6NP61 321 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 E9PLN8 166 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 KIAA0355O15063 1070 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 NUDT3O95989 172 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 PDCP20941 246 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 RECQLP46063 649 aaPredicted RBP3.1□□□□□ -1.91
CHD9-204ENST00000561869 MPP3Q13368 585 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 ZNF169Q14929 603 aaPredicted RBP3.1□□□□□ -1.91
CHD9-204ENST00000561869 TMEM240Q5SV17 173 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 PPP4R3AQ6IN85 833 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 FOXR2Q6PJQ5 311 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 GADL1Q6ZQY3 521 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 TTC7BQ86TV6 843 aa3.1□□□□□ -1.91
CHD9-204ENST00000561869 CFAP52Q8N1V2 620 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms