RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 ARHGAP29Q52LW3 1261 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 ZNF569Q5MCW4 686 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 TDRD10Q5VZ19 366 aaKnown RBP7.05□□□□□ -1.28
CAPN3-210ENST00000561817 TLK2Q86UE8 772 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 ZBTB8OSQ8IWT0 167 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 OR5B17Q8NGF7 314 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 LMBR1Q8WVP7 490 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 CCDC127Q96BQ5 260 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 SPAG5Q96R06 1193 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 CGRRF1Q99675 332 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 MSTO1Q9BUK6 570 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 IFIH1Q9BYX4 1025 aaKnown RBP7.05□□□□□ -1.28
CAPN3-210ENST00000561817 UPF3AQ9H1J1 476 aaKnown RBP7.05□□□□□ -1.28
CAPN3-210ENST00000561817 PDE11AQ9HCR9 933 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 UBE2TQ9NPD8 197 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-210ENST00000561817 RAB20Q9NX57 234 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 NAGPAQ9UK23 515 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 CPSF3Q9UKF6 684 aaKnown RBP7.05□□□□□ -1.28
CAPN3-210ENST00000561817 ZNF215Q9UL58 517 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-210ENST00000561817 GABRQQ9UN88 632 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 TNFSF13BQ9Y275 285 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 MRFAP1Q9Y605 127 aa7.05□□□□□ -1.28
CAPN3-210ENST00000561817 SCN10AQ9Y5Y9 1956 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 A0A087WZ62 844 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 MYADML2A6NDP7 307 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 RRN3P2A6NIE6 340 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 CLDN3O15551 220 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 ZC3H11AO75152 810 aaKnown RBP eCLIP7.04□□□□□ -1.28
CAPN3-210ENST00000561817 GPR32O75388 356 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 F12P00748 615 aaPredicted RBP7.04□□□□□ -1.28
CAPN3-210ENST00000561817 HLA-DRAP01903 254 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 VTNP04004 478 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 SMIM10L2AP0DMW4 78 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 SMIM10L2BP0DMW5 78 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 CHRNB2P17787 502 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 ACO1P21399 889 aaKnown RBP7.04□□□□□ -1.28
CAPN3-210ENST00000561817 CASQ1P31415 396 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 POU5F1Q01860 360 aaKnown RBP7.04□□□□□ -1.28
CAPN3-210ENST00000561817 ARID5AQ03989 594 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 PRKCZQ05513 592 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 HSP90AA2PQ14568 343 aaPredicted RBP7.04□□□□□ -1.28
CAPN3-210ENST00000561817 BMS1Q14692 1282 aaKnown RBP7.04□□□□□ -1.28
CAPN3-210ENST00000561817 SPA17Q15506 151 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 NAB2Q15742 525 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 ENOX2Q16206 610 aaKnown RBP7.04□□□□□ -1.28
CAPN3-210ENST00000561817 SEZ6Q53EL9 994 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 TDRD12Q587J7 1177 aaKnown RBP7.04□□□□□ -1.28
CAPN3-210ENST00000561817 CCDC122Q5T0U0 273 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 LCE2CQ5TA81 110 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 ATF7IP2Q5U623 682 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 PAPD7Q5XG87 772 aaKnown RBP7.04□□□□□ -1.28
CAPN3-210ENST00000561817 LMBRD2Q68DH5 695 aaPredicted RBP7.04□□□□□ -1.28
CAPN3-210ENST00000561817 SDE2Q6IQ49 451 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 MPZL3Q6UWV2 235 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 RUFY4Q6ZNE9 571 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 CTU1Q7Z7A3 348 aaKnown RBP7.04□□□□□ -1.28
CAPN3-210ENST00000561817 KIAA1328Q86T90 577 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 NPAS3Q8IXF0 933 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 METTL13Q8N6R0 699 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 UBR7Q8N806 425 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 FBXL13Q8NEE6 735 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 CXorf38Q8TB03 319 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 RAET1EQ8TD07 263 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 TRIB2Q92519 343 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 TSC1Q92574 1164 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 ZNF668Q96K58 619 aaPredicted RBP7.04□□□□□ -1.28
CAPN3-210ENST00000561817 NLRP4Q96MN2 994 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 FDXACB1Q9BRP7 624 aaPredicted RBP7.04□□□□□ -1.28
CAPN3-210ENST00000561817 PACSIN1Q9BY11 444 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 TSGA10Q9BZW7 698 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 CDT1Q9H211 546 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 PDZD7Q9H5P4 517 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 APOBEC3GQ9HC16 384 aaKnown RBP7.04□□□□□ -1.28
CAPN3-210ENST00000561817 PRM3Q9NNZ6 103 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 SETD4Q9NVD3 440 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 PRMT7Q9NVM4 692 aaPredicted RBP7.04□□□□□ -1.28
CAPN3-210ENST00000561817 RBAKQ9NYW8 714 aaPredicted RBP7.04□□□□□ -1.28
CAPN3-210ENST00000561817 MAP10Q9P2G4 905 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 ADAMTS1Q9UHI8 967 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 NOCTQ9UK39 431 aaKnown RBP7.04□□□□□ -1.28
CAPN3-210ENST00000561817 GUCA1BQ9UMX6 200 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 CAPN6Q9Y6Q1 641 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 KAT6AQ92794 2004 aa7.04□□□□□ -1.28
CAPN3-210ENST00000561817 TRIP12Q14669 1992 aaPredicted RBP7.04□□□□□ -1.28
CAPN3-210ENST00000561817 NRCAMQ92823 1304 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 PCNTO95613 3336 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 MYH10P35580 1976 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 SMIM35A0A1B0GVV1 85 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 INO80B-WBP1J3KQ70 363 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 DYNC1I1O14576 645 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 KRT86O43790 486 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 B4GALT4O60513 344 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 TSPAN1O60635 241 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 DUSP11O75319 330 aaKnown RBP7.03□□□□□ -1.28
CAPN3-210ENST00000561817 TADA3O75528 432 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 SLU7O95391 586 aaKnown RBP7.03□□□□□ -1.28
CAPN3-210ENST00000561817 ADH1CP00326 375 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 DLATP10515 647 aaKnown RBP7.03□□□□□ -1.28
CAPN3-210ENST00000561817 MCF2P10911 925 aa7.03□□□□□ -1.28
CAPN3-210ENST00000561817 ARF4P18085 180 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms