RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 TRIM59Q8IWR1 403 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 SCYL3Q8IZE3 742 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 ZNF398Q8TD17 642 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 USP29Q9HBJ7 922 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 OSGEPQ9NPF4 335 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 SH3GLB2Q9NR46 395 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 DDX18Q9NVP1 670 aaKnown RBP19.72■□□□□ 0.75
RAB40C-206ENST00000561781 PHF2O75151 1096 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 CHRNA3P32297 505 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 EPS15P42566 896 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 DNAJC3Q13217 504 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 ITGA7Q13683 1181 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 ZNF568Q3ZCX4 644 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 CAVIN4Q5BKX8 364 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 Q6ZNX1 250 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 FBXO33Q7Z6M2 555 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 PATL1Q86TB9 770 aaKnown RBP19.71■□□□□ 0.75
RAB40C-206ENST00000561781 TRIM50Q86XT4 487 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 ANKRD35Q8N283 1001 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 SBF1O95248 1867 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 LTBP3Q9NS15 1303 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 CCNT1O60563 726 aaKnown RBP19.71■□□□□ 0.75
RAB40C-206ENST00000561781 EDF1O60869 148 aaKnown RBP19.71■□□□□ 0.75
RAB40C-206ENST00000561781 SERPINB7O75635 380 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 GAS8O95995 478 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 PLCG2P16885 1265 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 PTGIRP43119 386 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 ASPHQ12797 758 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 GRIK5Q16478 980 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 RBM44Q6ZP01 1051 aaKnown RBP19.71■□□□□ 0.75
RAB40C-206ENST00000561781 NLRP9Q7RTR0 991 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 NIM1KQ8IY84 436 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 ART4Q93070 314 aa19.71■□□□□ 0.75
RAB40C-206ENST00000561781 PRICKLE1Q96MT3 831 aaPredicted RBP19.71■□□□□ 0.75
RAB40C-206ENST00000561781 LBHD1Q9BQE6 289 aaPredicted RBP19.71■□□□□ 0.75
RAB40C-206ENST00000561781 TDRKHQ9Y2W6 561 aaKnown RBP19.71■□□□□ 0.75
RAB40C-206ENST00000561781 FAM47DPA6NHR8 397 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 MATN2O00339 956 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 ZNF862O60290 1169 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 TCEA3O75764 348 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 HSPA6P17066 643 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 MUTP22033 750 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 RPL5P46777 297 aaKnown RBP19.7■□□□□ 0.74
RAB40C-206ENST00000561781 NEK2P51955 445 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 AP2B1P63010 937 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 GTF2IP78347 998 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 GRB10Q13322 594 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 MYBPC2Q14324 1141 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 LETM2Q2VYF4 491 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 KLHDC10Q6PID8 442 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 CCDC25Q86WR0 208 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 LARP4BQ92615 738 aaKnown RBP19.7■□□□□ 0.74
RAB40C-206ENST00000561781 EBF3Q9H4W6 596 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 LRP2BPQ9P2M1 347 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 NENFQ9UMX5 172 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 RAB15P59190 212 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 EPM2AIP1Q7L775 607 aaPredicted RBP19.7■□□□□ 0.74
RAB40C-206ENST00000561781 ZNF804AQ7Z570 1209 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 SDR16C5Q8N3Y7 309 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 JDP2Q8WYK2 163 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 HSPBAP1Q96EW2 488 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 CDC42EP4Q9H3Q1 356 aaKnown RBP19.7■□□□□ 0.74
RAB40C-206ENST00000561781 LGALS13Q9UHV8 139 aa19.7■□□□□ 0.74
RAB40C-206ENST00000561781 AP1G1O43747 822 aa19.69■□□□□ 0.74
RAB40C-206ENST00000561781 CYP7A1P22680 504 aa19.69■□□□□ 0.74
RAB40C-206ENST00000561781 ANXA13P27216 316 aa19.69■□□□□ 0.74
RAB40C-206ENST00000561781 CYFIP1Q7L576 1253 aa19.69■□□□□ 0.74
RAB40C-206ENST00000561781 MTDHQ86UE4 582 aaKnown RBP19.69■□□□□ 0.74
RAB40C-206ENST00000561781 PTCD3Q96EY7 689 aaKnown RBP19.69■□□□□ 0.74
RAB40C-206ENST00000561781 NSL1Q96IY1 281 aa19.69■□□□□ 0.74
RAB40C-206ENST00000561781 KIAA1522Q9P206 1035 aaPredicted RBP19.69■□□□□ 0.74
RAB40C-206ENST00000561781 HESX1Q9UBX0 185 aa19.69■□□□□ 0.74
RAB40C-206ENST00000561781 PCYOX1Q9UHG3 505 aa19.69■□□□□ 0.74
RAB40C-206ENST00000561781 ARHGAP10A1A4S6 786 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 ACSL3O95573 720 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 UCHL3P15374 230 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 SLC9A1P19634 815 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 RPL26P61254 145 aaKnown RBP19.68■□□□□ 0.74
RAB40C-206ENST00000561781 KIF22Q14807 665 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 KYNUQ16719 465 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 FOXR2Q6PJQ5 311 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 DDX12PQ92771 950 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 TRAIPQ9BWF2 469 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 STK33Q9BYT3 514 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 NRDE2Q9H7Z3 1164 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 TELO2Q9Y4R8 837 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 PCDHA3Q9Y5H8 950 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 ATAD5Q96QE3 1844 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 ARAP2Q8WZ64 1704 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 CCDC162PA2VCL2 907 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 RAP1GDS1P52306 607 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 FAM47AQ5JRC9 791 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 AADACL2Q6P093 401 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 SRRM1Q8IYB3 904 aaKnown RBP19.68■□□□□ 0.74
RAB40C-206ENST00000561781 DMTF1Q9Y222 760 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 TRAF3IP3Q9Y228 551 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 HBS1LQ9Y450 684 aaKnown RBP19.68■□□□□ 0.74
RAB40C-206ENST00000561781 NR2E3Q9Y5X4 410 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 GJA3Q9Y6H8 435 aa19.68■□□□□ 0.74
RAB40C-206ENST00000561781 BAZ2AQ9UIF9 1905 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms