RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 POU5F1Q01860 360 aaKnown RBP12.57□□□□□ -0.4
HERC1-214ENST00000561400 BFSP1Q12934 665 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 PSMD6Q15008 389 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 XKR4Q5GH76 650 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 C1orf220Q5T0J3 134 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 FRMD5Q7Z6J6 570 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 NPAS4Q8IUM7 802 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 CCDC127Q96BQ5 260 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 FAM84AQ96KN4 292 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 POP1Q99575 1024 aaKnown RBP12.57□□□□□ -0.4
HERC1-214ENST00000561400 TOPORSQ9NS56 1045 aaPredicted RBP12.57□□□□□ -0.4
HERC1-214ENST00000561400 ARMCX3Q9UH62 379 aaPredicted RBP12.57□□□□□ -0.4
HERC1-214ENST00000561400 PLAGL2Q9UPG8 496 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.57□□□□□ -0.4
HERC1-214ENST00000561400 PTPRJQ12913 1337 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 PTGESO14684 152 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 GNA14O95837 355 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 IMPDH2P12268 514 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 ATP1A3P13637 1013 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 KCNJ6P48051 423 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 GRIK3Q13003 919 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 SHHQ15465 462 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 CCDC40Q4G0X9 1142 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 GLRA4Q5JXX5 417 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 RASIP1Q5U651 963 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 FAM117BQ6P1L5 589 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 INTS8Q75QN2 995 aaKnown RBP12.57□□□□□ -0.4
HERC1-214ENST00000561400 EFCAB13Q8IY85 973 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 HELQQ8TDG4 1101 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 PLEKHA5Q9HAU0 1116 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 CNTN3Q9P232 1028 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 LRFN2Q9ULH4 789 aa12.57□□□□□ -0.4
HERC1-214ENST00000561400 GBF1Q92538 1859 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 KCNJ18B7U540 433 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 DLATP10515 647 aaKnown RBP12.56□□□□□ -0.4
HERC1-214ENST00000561400 VAMP7P51809 220 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 MCCD1P59942 119 aaPredicted RBP12.56□□□□□ -0.4
HERC1-214ENST00000561400 MLLT1Q03111 559 aaPredicted RBP12.56□□□□□ -0.4
HERC1-214ENST00000561400 PPP2R3AQ06190 1150 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 KCNJ12Q14500 433 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 TCP11X2Q5H9J9 407 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 TEX35Q5T0J7 233 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 LMBRD2Q68DH5 695 aaPredicted RBP12.56□□□□□ -0.4
HERC1-214ENST00000561400 JADE1Q6IE81 842 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 CCDC186Q7Z3E2 898 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 TRIM59Q8IWR1 403 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 TMEM130Q8N3G9 435 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 ZNF483Q8TF39 744 aaPredicted RBP12.56□□□□□ -0.4
HERC1-214ENST00000561400 ASB7Q9H672 318 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 SLC24A3Q9HC58 644 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 METTL14Q9HCE5 456 aaKnown RBP12.56□□□□□ -0.4
HERC1-214ENST00000561400 UBN1Q9NPG3 1134 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 INPP5FQ9Y2H2 1132 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 SMIM28A0A1B0GU29 152 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 LRRIQ3A6PVS8 624 aaPredicted RBP12.56□□□□□ -0.4
HERC1-214ENST00000561400 INPPL1O15357 1258 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 DGKIO75912 1065 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 ZRANB2O95218 330 aaKnown RBP eCLIP12.56□□□□□ -0.49e-6■□□□□ 10.3
HERC1-214ENST00000561400 IL18RAPO95256 599 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 NFICP08651 508 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 TRIM49P0CI25 452 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 TRIM49CP0CI26 452 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 SCNN1GP51170 649 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 GLB1LQ6UWU2 654 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 ZNF397Q8NF99 534 aaPredicted RBP12.56□□□□□ -0.4
HERC1-214ENST00000561400 NEK11Q8NG66 645 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 TMC2Q8TDI7 906 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 ZNF516Q92618 1163 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 SLC35C1Q96A29 364 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 AGAP3Q96P47 875 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 CASD1Q96PB1 797 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 UBE2OQ9C0C9 1292 aaKnown RBP12.56□□□□□ -0.4
HERC1-214ENST00000561400 SLC4A7Q9Y6M7 1214 aa12.56□□□□□ -0.4
HERC1-214ENST00000561400 GOLGA6L19H0YKK7 550 aa12.55□□□□□ -0.4
HERC1-214ENST00000561400 KRT13P13646 458 aa12.55□□□□□ -0.4
HERC1-214ENST00000561400 KCNE1P15382 129 aa12.55□□□□□ -0.4
HERC1-214ENST00000561400 CLDN10P78369 228 aa12.55□□□□□ -0.4
HERC1-214ENST00000561400 CCDC15Q0P6D6 951 aa12.55□□□□□ -0.4
HERC1-214ENST00000561400 NAB2Q15742 525 aa12.55□□□□□ -0.4
HERC1-214ENST00000561400 ZBTB6Q15916 424 aa12.55□□□□□ -0.4
HERC1-214ENST00000561400 DCAF17Q5H9S7 520 aaPredicted RBP12.55□□□□□ -0.4
HERC1-214ENST00000561400 FAM114A1Q8IWE2 563 aa12.55□□□□□ -0.4
HERC1-214ENST00000561400 OR5B17Q8NGF7 314 aa12.55□□□□□ -0.4
HERC1-214ENST00000561400 SNRNP27Q8WVK2 155 aaKnown RBP12.55□□□□□ -0.4
HERC1-214ENST00000561400 FNBP1Q96RU3 617 aa12.55□□□□□ -0.4
HERC1-214ENST00000561400 POMCP01189 267 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 EEF1GP26641 437 aaKnown RBP12.54□□□□□ -0.4
HERC1-214ENST00000561400 MTIF2P46199 727 aaKnown RBP12.54□□□□□ -0.4
HERC1-214ENST00000561400 PPP3CAQ08209 521 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 KRT31Q15323 416 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 NOMO2Q5JPE7 1267 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 TCERG1LQ5VWI1 586 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 SCARA3Q6AZY7 606 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 APTXQ7Z2E3 356 aaKnown RBP12.54□□□□□ -0.4
HERC1-214ENST00000561400 CD302Q8IX05 232 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 C18orf25Q96B23 403 aaPredicted RBP12.54□□□□□ -0.4
HERC1-214ENST00000561400 ZNF689Q96CS4 500 aaPredicted RBP12.54□□□□□ -0.4
HERC1-214ENST00000561400 KIF12Q96FN5 646 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 PPP1R10Q96QC0 940 aaKnown RBP12.54□□□□□ -0.4
HERC1-214ENST00000561400 RPS6KC1Q96S38 1066 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms