RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 PUS10Q3MIT2 529 aaKnown RBP10.96□□□□□ -0.65
HERC1-212ENST00000561348 CTXN3Q4LDR2 81 aa10.96□□□□□ -0.65
HERC1-212ENST00000561348 ELMSAN1Q6PJG2 1045 aa10.96□□□□□ -0.65
HERC1-212ENST00000561348 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.96□□□□□ -0.65
HERC1-212ENST00000561348 EPM2AIP1Q7L775 607 aaPredicted RBP10.96□□□□□ -0.65
HERC1-212ENST00000561348 SMYD4Q8IYR2 804 aaPredicted RBP10.96□□□□□ -0.65
HERC1-212ENST00000561348 CSGALNACT2Q8N6G5 542 aa10.96□□□□□ -0.65
HERC1-212ENST00000561348 CACTINQ8WUQ7 758 aaKnown RBP10.96□□□□□ -0.65
HERC1-212ENST00000561348 FNBP1Q96RU3 617 aa10.96□□□□□ -0.65
HERC1-212ENST00000561348 ASB7Q9H672 318 aa10.96□□□□□ -0.65
HERC1-212ENST00000561348 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.96□□□□□ -0.65
HERC1-212ENST00000561348 AGPAT3Q9NRZ7 376 aa10.96□□□□□ -0.65
HERC1-212ENST00000561348 CHST7Q9NS84 486 aa10.96□□□□□ -0.65
HERC1-212ENST00000561348 HOOK1Q9UJC3 728 aaKnown RBP10.96□□□□□ -0.65
HERC1-212ENST00000561348 IRAK3Q9Y616 596 aa10.96□□□□□ -0.65
HERC1-212ENST00000561348 CDY1Q9Y6F8 540 aa10.96□□□□□ -0.65
HERC1-212ENST00000561348 STYXL1Q9Y6J8 313 aa10.96□□□□□ -0.65
HERC1-212ENST00000561348 CCDC195A0A1B0GUA6 201 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 ADAM12O43184 909 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 TGFB1I1O43294 461 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 TGM5O43548 720 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 LILRB3O75022 631 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 RFPL2O75678 378 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 SMC2O95347 1197 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 ITGB3P05106 788 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 MYL1P05976 194 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 CPB1P15086 417 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 TNNI1P19237 187 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 POLR2BP30876 1174 aaKnown RBP10.95□□□□□ -0.66
HERC1-212ENST00000561348 ELF1P32519 619 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 WNT7BP56706 349 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 CREMQ03060 361 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 BFSP1Q12934 665 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 VARS2Q5ST30 1063 aaKnown RBP10.95□□□□□ -0.66
HERC1-212ENST00000561348 LIN9Q5TKA1 542 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 SPATA1Q5VX52 437 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 C9orf57Q5W0N0 161 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 CEP135Q66GS9 1140 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 PDXDC1Q6P996 788 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 SYCE2Q6PIF2 218 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 ANKS3Q6ZW76 656 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 BRSK2Q8IWQ3 736 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 EFCAB13Q8IY85 973 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 FMR1NBQ8N0W7 255 aaPredicted RBP10.95□□□□□ -0.66
HERC1-212ENST00000561348 XXYLT1Q8NBI6 393 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 KIAA0895Q8NCT3 520 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 LNX1Q8TBB1 728 aaPredicted RBP10.95□□□□□ -0.66
HERC1-212ENST00000561348 SLC22A17Q8WUG5 538 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 PIK3R5Q8WYR1 880 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 SMARCE1Q969G3 411 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 MSLNLQ96KJ4 702 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 POP1Q99575 1024 aaKnown RBP10.95□□□□□ -0.66
HERC1-212ENST00000561348 CLSTN3Q9BQT9 956 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 DZANK1Q9NVP4 752 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 AGAP1Q9UPQ3 857 aa10.95□□□□□ -0.66
HERC1-212ENST00000561348 PDCD11Q14690 1871 aaKnown RBP10.94□□□□□ -0.66
HERC1-212ENST00000561348 UBE4BO95155 1302 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 FAM237AA0A1B0GTK4 181 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 H7C4K7 107 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 TMEM189-UBE2V1I3L0A0 370 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 BIN1O00499 593 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 CALUO43852 315 aaPredicted RBP10.94□□□□□ -0.66
HERC1-212ENST00000561348 PHACTR2O75167 634 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 KIF20AO95235 890 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 TNNC2P02585 160 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 HOXB8P17481 243 aaPredicted RBP10.94□□□□□ -0.66
HERC1-212ENST00000561348 CYP3A5P20815 502 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 FGFR3P22607 806 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 YWHAHQ04917 246 aaPredicted RBP10.94□□□□□ -0.66
HERC1-212ENST00000561348 EHHADHQ08426 723 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 CBX2Q14781 532 aaPredicted RBP10.94□□□□□ -0.66
HERC1-212ENST00000561348 COL19A1Q14993 1142 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 ZBTB6Q15916 424 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 SNRNP35Q16560 246 aaKnown RBP10.94□□□□□ -0.66
HERC1-212ENST00000561348 CAMK4Q16566 473 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 ATAT1Q5SQI0 421 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 ZNF280DQ6N043 979 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 CD300LGQ6UXG3 332 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 RNF168Q8IYW5 571 aaPredicted RBP10.94□□□□□ -0.66
HERC1-212ENST00000561348 SMRP1Q8NCR6 262 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 KREMEN2Q8NCW0 462 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 APPL2Q8NEU8 664 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 FEZF2Q8TBJ5 459 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 KCNN1Q92952 543 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 ANKRD36BP1Q96IX9 119 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 SUSD3Q96L08 255 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 RIPOR3Q96MK2 946 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 MTMR12Q9C0I1 747 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 SFXN1Q9H9B4 322 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 RXFP1Q9HBX9 757 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 DPP7Q9UHL4 492 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 C2CD2Q9Y426 696 aa10.94□□□□□ -0.66
HERC1-212ENST00000561348 ANK1P16157 1881 aa10.93□□□□□ -0.66
HERC1-212ENST00000561348 PLXNA3P51805 1871 aa10.93□□□□□ -0.66
HERC1-212ENST00000561348 TNFRSF10AO00220 468 aa10.93□□□□□ -0.66
HERC1-212ENST00000561348 CYB561D2O14569 222 aa10.93□□□□□ -0.66
HERC1-212ENST00000561348 PRRG1O14668 218 aa10.93□□□□□ -0.66
HERC1-212ENST00000561348 SYN3O14994 580 aa10.93□□□□□ -0.66
HERC1-212ENST00000561348 KIAA0391O15091 583 aaKnown RBP10.93□□□□□ -0.66
HERC1-212ENST00000561348 CCL16O15467 120 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms