RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CYB561D2O14569 222 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 ABLIM1O14639 778 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 CAVIN2O95810 425 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 CTSAP10619 480 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 LRPAP1P30533 357 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 POLR2BP30876 1174 aaKnown RBP11.54□□□□□ -0.56
TPM1-229ENST00000561242 GTF2H1P32780 548 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 YWHAEP62258 255 aaKnown RBP11.54□□□□□ -0.56
TPM1-229ENST00000561242 MYL7Q01449 175 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 TSPY1Q01534 308 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 CTXN3Q4LDR2 81 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 ZBTB41Q5SVQ8 909 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 LIN9Q5TKA1 542 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 C9orf57Q5W0N0 161 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 TRAPPC11Q7Z392 1133 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 FRMD5Q7Z6J6 570 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 ELMOD1Q8N336 334 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 LRRC52Q8N7C0 313 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 MRPL43Q8N983 215 aaKnown RBP11.54□□□□□ -0.56
TPM1-229ENST00000561242 MAFAQ8NHW3 353 aaPredicted RBP11.54□□□□□ -0.56
TPM1-229ENST00000561242 GPT2Q8TD30 523 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 HPDLQ96IR7 371 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 MFSD14AQ96MC6 490 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 PIDD1Q9HB75 910 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 RC3H2Q9HBD1 1191 aaKnown RBP11.54□□□□□ -0.56
TPM1-229ENST00000561242 TUBGCP4Q9UGJ1 667 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 STXBP5LQ9Y2K9 1186 aa11.54□□□□□ -0.56
TPM1-229ENST00000561242 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.54□□□□□ -0.56
TPM1-229ENST00000561242 TMEM189-UBE2V1I3L0A0 370 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 CPB1P15086 417 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 NRIP1P48552 1158 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 AFF1P51825 1210 aaKnown RBP11.53□□□□□ -0.56
TPM1-229ENST00000561242 ENPEPQ07075 957 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 PSMD5Q16401 504 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 ZNF699Q32M78 642 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 FILIP1LQ4L180 1135 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 ZNF667Q5HYK9 610 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 KRT39Q6A163 491 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 CES5AQ6NT32 575 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 DCP1BQ8IZD4 617 aaKnown RBP11.53□□□□□ -0.56
TPM1-229ENST00000561242 TMEM86AQ8N2M4 240 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 TAF4BQ92750 862 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 CASP10Q92851 521 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 HLA-CQ95604 372 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 FBXL18Q96ME1 805 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 PCMTD1Q96MG8 357 aaPredicted RBP11.53□□□□□ -0.56
TPM1-229ENST00000561242 ZMAT2Q96NC0 199 aaKnown RBP11.53□□□□□ -0.56
TPM1-229ENST00000561242 MTMR12Q9C0I1 747 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 HAPLN2Q9GZV7 340 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 GOLGA2P5Q9HBQ8 144 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 CLDND1Q9NY35 253 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 NXF1Q9UBU9 619 aaKnown RBP11.53□□□□□ -0.56
TPM1-229ENST00000561242 PCDHB8Q9UN66 801 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 COG5Q9UP83 839 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 SNX9Q9Y5X1 595 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 EVPLQ92817 2033 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 TANC1Q9C0D5 1861 aa11.53□□□□□ -0.56
TPM1-229ENST00000561242 ALPK3Q96L96 1907 aa11.52□□□□□ -0.56
TPM1-229ENST00000561242 OR6C75A6NL08 312 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 GLUD1P00367 558 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 ADRB2P07550 413 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 PCSK1P29120 753 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 LHX1P48742 406 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 MXI1P50539 228 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 DSG1Q02413 1049 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 NCOA4Q13772 614 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 PUS10Q3MIT2 529 aaKnown RBP11.52□□□□□ -0.57
TPM1-229ENST00000561242 WDR72Q3MJ13 1102 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 FKBP15Q5T1M5 1219 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 LMBRD2Q68DH5 695 aaPredicted RBP11.52□□□□□ -0.57
TPM1-229ENST00000561242 OVOS1Q6IE37 1185 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 LLGL2Q6P1M3 1020 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 FOXR2Q6PJQ5 311 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 CRELD2Q6UXH1 353 aaPredicted RBP11.52□□□□□ -0.57
TPM1-229ENST00000561242 CCDC149Q6ZUS6 474 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 DPH6Q7L8W6 267 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 GLYCTKQ8IVS8 523 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 GPR65Q8IYL9 337 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 TTC39CQ8N584 583 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 GSTCDQ8NEC7 633 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 PARD3BQ8TEW8 1205 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 TMEM174Q8WUU8 243 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 SUSD3Q96L08 255 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 SENP8Q96LD8 212 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 IKZF4Q9H2S9 585 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 TMEM8AQ9HCN3 771 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 DZANK1Q9NVP4 752 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 DMAC2Q9NW81 257 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 HCSTQ9UBK5 93 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 MTCH2Q9Y6C9 303 aa11.52□□□□□ -0.57
TPM1-229ENST00000561242 LTBP2Q14767 1821 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 TRIM49BA6NDI0 452 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 PPP1R3GB7ZBB8 358 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 PRRG1O14668 218 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 AKAP3O75969 853 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 TYMPP19971 482 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 HOXD13P35453 343 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 BRCC3P46736 316 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 GCLMP48507 274 aa11.51□□□□□ -0.57
TPM1-229ENST00000561242 LILRA4P59901 499 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms