RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 DSG1Q02413 1049 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 PAK1Q13153 545 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 SKOR2Q2VWA4 1001 aaPredicted RBP10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 USP41Q3LFD5 358 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 CEP135Q66GS9 1140 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 INTS8Q75QN2 995 aaKnown RBP10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 USP37Q86T82 979 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 LRRC52Q8N7C0 313 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 C1orf127Q8N9H9 656 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 OR5B17Q8NGF7 314 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 NELFBQ8WX92 580 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 ZNF516Q92618 1163 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 RABGGTAQ92696 567 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 SYAP1Q96A49 352 aaPredicted RBP10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 ANKRD36BP1Q96IX9 119 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 SUSD3Q96L08 255 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 MED15Q96RN5 788 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 FNBP1Q96RU3 617 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 NSUN3Q9H649 340 aaKnown RBP10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 RXFP1Q9HBX9 757 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 RWDD2AQ9UIY3 292 aa10.41□□□□□ -0.74
RABGGTA-221ENST00000561055 EYSQ5T1H1 3165 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 MYH10P35580 1976 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 C2orf16Q68DN1 1984 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 FSD2A1L4K1 749 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 C2orf71A6NGG8 1288 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 SYN3O14994 580 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 SLC16A3O15427 465 aaKnown RBP10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 NCK2O43639 380 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 CXCL14O95715 111 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 STAU1O95793 577 aaKnown RBP10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 TNNC2P02585 160 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 C4BPAP04003 597 aaKnown RBP10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 IGFBP4P22692 258 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 GTF2H1P32780 548 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 PNPLA4P41247 253 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 GLUD2P49448 558 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 MARSP56192 900 aaKnown RBP10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 TFAMQ00059 246 aaKnown RBP10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 BFSP1Q12934 665 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 KCNC3Q14003 757 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 MRPL58Q14197 206 aaKnown RBP10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 SMC1AQ14683 1233 aaKnown RBP10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 DPCR1Q3MIW9 517 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 C1orf220Q5T0J3 134 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 PDXDC1Q6P996 788 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 C15orf39Q6ZRI6 1047 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 TAS1R1Q7RTX1 841 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 TRAPPC11Q7Z392 1133 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 TMC7Q7Z402 723 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 FAM186BQ8IYM0 893 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 PIK3R5Q8WYR1 880 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 CDCA3Q99618 268 aaPredicted RBP10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 TCF25Q9BQ70 676 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 METTL14Q9HCE5 456 aaKnown RBP10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 MRPL17Q9NRX2 175 aaKnown RBP10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 FNIP2Q9P278 1114 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 DACH1Q9UI36 760 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 SIX4Q9UIU6 781 aa10.4□□□□□ -0.74
RABGGTA-221ENST00000561055 DOCK6Q96HP0 2047 aa10.4□□□□□ -0.75
RABGGTA-221ENST00000561055 DENND4CQ5VZ89 1909 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 LRRIQ3A6PVS8 624 aaPredicted RBP10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 LETM1O95202 739 aaPredicted RBP10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 GNA14O95837 355 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 ITGB3P05106 788 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 CYP11A1P05108 521 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 TMEM191BP0C7N4 346 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 EPB41P11171 864 aaKnown RBP10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 TNNI1P19237 187 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 TYMPP19971 482 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 BRCC3P46736 316 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 VAMP7P51809 220 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 GUCY2FP51841 1108 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 DLG4P78352 724 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 RBP5P82980 135 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 CREMQ03060 361 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 PTPN14Q15678 1187 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 CTC1Q2NKJ3 1217 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 ZACNQ401N2 412 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 FAM171A1Q5VUB5 890 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 KLHL10Q6JEL2 608 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 TMEM184AQ6ZMB5 413 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 LIMS2Q7Z4I7 341 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 FRMD5Q7Z6J6 570 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 CSGALNACT2Q8N6G5 542 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 LNX1Q8TBB1 728 aaPredicted RBP10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 HASPINQ8TF76 798 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 NOC3LQ8WTT2 800 aaKnown RBP10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 PPP2R3CQ969Q6 453 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 CCDC127Q96BQ5 260 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 ZNF560Q96MR9 790 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 POP1Q99575 1024 aaKnown RBP10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 TTPALQ9BTX7 342 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 MTMR12Q9C0I1 747 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 VRTNQ9H8Y1 702 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 GDAP2Q9NXN4 497 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 PCDHB8Q9UN66 801 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 CTNND2Q9UQB3 1225 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms